Factsheet for AT2G43800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

endoplasmic reticulum 5
golgi 4
extracellular 4
plastid 2
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83457	Canola	golgi, plasma membrane, vacuole	73.49	77.94
CDY44259	Canola	plasma membrane, vacuole	72.71	77.11
CDY17909	Canola	golgi, vacuole	72.82	76.77
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	73.27	76.43
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	75.62	75.53
CDX79799	Canola	mitochondrion, plastid, vacuole	66.55	74.94
GSMUA_Achr11P...	Banana	mitochondrion, plastid	28.52	59.3
GSMUA_Achr5P25760_001	Banana	mitochondrion	27.18	55.35
GSMUA_Achr6P18370_001	Banana	nucleus	33.67	53.46
Os01t0897700-01	Rice	cytosol	13.76	50.41
VIT_05s0094g00920.t01	Wine grape	nucleus	48.43	46.56
KRH71295	Soybean	vacuole	44.07	44.77
PGSC0003DMT400013717	Potato	plastid	43.06	44.72
Solyc12g019480.1.1	Tomato	nucleus	44.41	44.71
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	37.58	44.5
KRH50174	Soybean	vacuole	44.3	44.2
GSMUA_Achr10P...	Banana	plastid	39.49	43.96
Solyc08g014430.2.1	Tomato	nucleus	37.14	43.86
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	35.46	43.85
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	31.66	42.18
AT3G25493.1	Thale cress	vacuole	7.49	41.88
Zm00001d021173_P001	Maize	plasma membrane	34.68	40.68
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	38.03	40.52
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	35.57	40.36
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	35.35	40.15
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	35.12	39.95
TraesCS5A01G304700.1	Wheat	golgi	35.12	39.9
OQU88036	Sorghum	extracellular, plasma membrane	40.94	38.94
Zm00001d012158_P001	Maize	extracellular, plasma membrane	41.16	38.7
Zm00001d042506_P002	Maize	extracellular, plasma membrane	41.16	38.49
TraesCS3A01G397900.1	Wheat	plasma membrane	40.27	37.93
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	44.52	37.87
HORVU3Hr1G089510.1	Barley	plasma membrane	40.16	37.75
TraesCS3B01G429900.1	Wheat	plasma membrane	40.27	37.74
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	35.46	37.65
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	35.79	37.65
TraesCS3D01G391800.1	Wheat	mitochondrion	39.6	37.18
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	37.02	36.82
TraesCS1D01G010200.1	Wheat	plastid	22.26	35.04
TraesCS1B01G059400.1	Wheat	plastid	22.04	34.99
TraesCS1A01G011800.1	Wheat	extracellular	19.8	33.21
AT5G48360.1	Thale cress	extracellular, vacuole	28.41	32.48
HORVU1Hr1G002300.8	Barley	plastid	26.29	32.46
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	29.19	31.45
GSMUA_Achr7P23740_001	Banana	plastid	40.49	30.19
AT3G07540.1	Thale cress	plasma membrane	27.96	29.73
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	26.06	28.45
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	27.74	28.05
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	26.17	27.89
AT1G70140.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	23.38	27.5
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	27.29	27.11
AT1G24150.2	Thale cress	endoplasmic reticulum	14.65	24.72
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	11.86	22.75
AT3G32400.2	Thale cress	cytosol	12.19	22.02
AT5G07780.1	Thale cress	plastid	10.96	21.12
AT1G59910.1	Thale cress	nucleus	20.25	19.48
AT1G42980.1	Thale cress	cytosol	5.37	16.05
Zm00001d035757_P003	Maize	plasma membrane	26.73	14.2
AT5G07770.3	Thale cress	plastid	11.3	13.85
AT2G25050.1	Thale cress	cytosol	16.89	12.93
AT1G31810.1	Thale cress	cytosol	16.89	12.28
AT5G58160.1	Thale cress	cytosol	16.67	11.77
AT5G07760.2	Thale cress	cytosol, plastid	11.41	11.76
AT5G07650.1	Thale cress	cytosol	10.07	11.04
AT5G07740.2	Thale cress	nucleus	16.78	8.91
AT3G32420.1	Thale cress	cytosol	0.78	6.54

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	EntrezGene:818984	UniProt:A0A178VS83	ProteinID:AAB64026.1	ProteinID:AEC10328.1
ArrayExpress:AT2G43800	EnsemblPlantsGene:AT2G43800	RefSeq:AT2G43800	TAIR:AT2G43800	RefSeq:AT2G43800-TAIR-G	EnsemblPlants:AT2G43800.1
TAIR:AT2G43800.1	InterPro:FH2_Formin	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015425
RefSeq:NP_181908.1	UniProt:O22824	ProteinID:OAP08654.1	PFAM:PF02181	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276
SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A2AE1	SEG:seg

Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]

Coordinates

chr2:+:18145439..18149031

Molecular Weight (calculated)

98325.4 Da

IEP (calculated)

8.027

GRAVY (calculated)

-0.514

Length

894 amino acids

Sequence
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.