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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • nucleus 1
  • extracellular 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g019480.1.1 Tomato nucleus 90.48 87.73
PGSC0003DMT400056393 Potato cytosol 35.54 63.75
Os01t0897700-01 Rice cytosol 17.54 61.89
GSMUA_Achr11P... Banana mitochondrion, plastid 30.78 61.63
GSMUA_Achr6P18370_001 Banana nucleus 39.84 60.92
GSMUA_Achr5P25760_001 Banana mitochondrion 29.38 57.63
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 49.25 56.16
PGSC0003DMT400083315 Potato cytosol 12.08 55.91
VIT_05s0094g00920.t01 Wine grape nucleus 56.21 52.04
KRH71295 Soybean vacuole 48.55 47.5
GSMUA_Achr10P... Banana plastid 43.55 46.7
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 36.35 46.65
KRH50174 Soybean vacuole 48.43 46.54
CDX83457 Canola golgi, plasma membrane, vacuole 44.37 45.31
CDY44259 Canola plasma membrane, vacuole 44.25 45.2
PGSC0003DMT400067386 Potato cytosol 18.0 44.67
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 37.28 44.4
CDX79799 Canola mitochondrion, plastid, vacuole 40.77 44.21
CDY17909 Canola golgi, vacuole 43.44 44.1
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 43.55 43.76
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 47.74 43.54
OQU88036 Sorghum extracellular, plasma membrane 47.39 43.4
PGSC0003DMT400036575 Potato mitochondrion 14.4 43.36
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 44.95 43.24
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.72 43.06
TraesCS3A01G397900.1 Wheat plasma membrane 46.92 42.57
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 38.91 42.51
TraesCS3B01G429900.1 Wheat plasma membrane 46.92 42.35
HORVU3Hr1G089510.1 Barley plasma membrane 46.69 42.27
Zm00001d012158_P001 Maize extracellular, plasma membrane 46.69 42.27
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 38.56 42.24
Zm00001d021173_P001 Maize plasma membrane 37.28 42.13
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 38.44 42.06
TraesCS5A01G304700.1 Wheat golgi 38.33 41.93
TraesCS3D01G391800.1 Wheat mitochondrion 46.11 41.7
Zm00001d042506_P002 Maize extracellular, plasma membrane 46.11 41.53
PGSC0003DMT400039073 Potato cytosol 13.01 41.48
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 40.42 41.48
PGSC0003DMT400055250 Potato vacuole 41.23 40.07
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 38.33 38.82
PGSC0003DMT400038519 Potato endoplasmic reticulum 39.72 38.82
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 37.51 38.36
TraesCS1D01G010200.1 Wheat plastid 24.62 37.32
TraesCS1B01G059400.1 Wheat plastid 24.16 36.94
TraesCS1A01G011800.1 Wheat extracellular 22.18 35.83
PGSC0003DMT400031544 Potato cytosol 18.7 35.46
HORVU1Hr1G002300.8 Barley plastid 27.76 33.01
GSMUA_Achr7P23740_001 Banana plastid 45.53 32.69
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 29.15 30.24
PGSC0003DMT400063542 Potato extracellular, golgi, plasma membrane 30.89 29.56
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 27.64 28.37
PGSC0003DMT400036332 Potato plasma membrane 29.62 27.63
EES17525 Sorghum endoplasmic reticulum, plasma membrane 26.13 27.47
PGSC0003DMT400049488 Potato golgi, plasma membrane, vacuole 27.41 27.1
PGSC0003DMT400063186 Potato plastid 23.69 27.02
PGSC0003DMT400058304 Potato plasma membrane 24.74 26.62
PGSC0003DMT400063143 Potato cytosol 8.94 24.52
PGSC0003DMT400029052 Potato cytosol 7.43 23.19
PGSC0003DMT400079306 Potato cytosol 9.76 20.84
PGSC0003DMT400020452 Potato cytosol 3.72 19.39
PGSC0003DMT400083163 Potato cytosol, mitochondrion, nucleus 2.32 16.26
Zm00001d035757_P003 Maize plasma membrane 26.36 13.49
PGSC0003DMT400079305 Potato cytosol, mitochondrion, plastid 6.5 7.16
Protein Annotations
EnsemblPlants:PGSC0003DMT400013717EnsemblPlantsGene:PGSC0003DMG400005365Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:FH2_ForminInterPro:IPR015425ncoils:CoilPANTHER:PTHR23213PANTHER:PTHR23213:SF276PFAM:PF02181
PFscan:PS51444PGSC:PGSC0003DMG400005365SEG:segSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI000296A41AUniProt:M1A386MapMan:20.2.2.6.1:::
Description
Formin 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400005365]
Coordinates
chr12:+:13247905..13252546
Molecular Weight (calculated)
94735.6 Da
IEP (calculated)
5.995
GRAVY (calculated)
-0.384
Length
861 amino acids
Sequence
(BLAST)
001: MPLTQNPFFP VFSSPPPPPP LPSDSYATFP ANISSLILPQ TSSHSSTKPI SGKLIAIIIS VSVLSAAFLT SLVAFFLHYY RQGKVEEKSY YQRTDSLRLV
101: PPNATPSDGV VIKKHLPSPP PPPPPPPPPP AMEVPRHTPT SNSSEFLYLG TLVSSREVES PELRPADGVA VNFQRLGSPE LLPLPPLPRQ HYRQTRKNGA
201: TEVGYSGEDD ENDEEFFSPR GSSGDKGSPS QTVSSPHATP YEVPLQTQNR FLYSNSNSPS ESSLLNSPSL EFNLSPKSLT SRSPDSLVNF LAPPRFIPTQ
301: TFRGFSSPPL SSGDTHNSPS IVSDSSARIS ESSLRNLGGF GSYVSMKVPP PPPPAPPPRF WEAPQVPKSV EAENGGPPVL MAPSMPVLGH HVSGNIKSSE
401: AVERRNDEIT KPKLKPLHWD KVRATSDRAM VWDQLKFSSF QLNEEMIETL FTANCSNSNP KDGITRLVQP VLNQENRVLD PKKSQNIAIL LRALNVTNEE
501: VCEALLEGNA DTLGSELLES LLKMAPTKEE ERKLQEFKDE SPFKLGPAEK FLKAVLYIPF AFNRVEAMLY IANFDSEIEY LKRSFETLET ACEELRNSRM
601: FLKLLEAVLK TGNRMNVGTN RGDACAFKLD TLLKLVDIKG ADGKTTLLHF VVQEIIRAEG SRLSGADDQN PIVEKTLQDE VEFRKIGLQV VSRLSGELTN
701: VKKAAAMDSD IISNEVAKLA AGIAKITNVL KLNKELVPSE NSRKFSESMN GFLKTAEQEI INIQAQESVA LSMVKEVTVY FHGDSAKEEA RPLRIFMVVR
801: DFLSILDQVC KDVGRMTDRT TISSGRQFPL TVDAGLPQVF PGYNVRQHDS SSEDETTPSA S
Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.