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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83457 Canola golgi, plasma membrane, vacuole 91.84 97.51
CDY44259 Canola plasma membrane, vacuole 88.72 94.19
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 75.53 75.62
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 71.28 74.45
GSMUA_Achr11P... Banana mitochondrion, plastid 27.49 57.21
GSMUA_Achr5P25760_001 Banana mitochondrion 26.59 54.21
GSMUA_Achr6P18370_001 Banana nucleus 32.74 52.04
Os01t0897700-01 Rice cytosol 13.85 50.82
Bra012246.1-P Field mustard cytosol 10.17 46.43
Bra029655.1-P Field mustard cytosol 15.64 46.2
VIT_05s0094g00920.t01 Wine grape nucleus 47.15 45.38
Solyc12g019480.1.1 Tomato nucleus 44.8 45.16
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 37.99 45.03
PGSC0003DMT400013717 Potato plastid 43.24 44.95
Solyc08g014430.2.1 Tomato nucleus 37.43 44.25
KRH71295 Soybean vacuole 43.46 44.2
GSMUA_Achr10P... Banana plastid 38.66 43.09
KRH50174 Soybean vacuole 43.02 42.97
Bra001256.1-P Field mustard plastid 18.1 42.52
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 31.73 42.32
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 33.74 41.77
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 35.08 39.85
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 34.97 39.77
TraesCS5A01G304700.1 Wheat golgi 34.86 39.64
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 37.09 39.57
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 34.64 39.44
Zm00001d021173_P001 Maize plasma membrane 33.52 39.37
OQU88036 Sorghum extracellular, plasma membrane 40.22 38.3
Zm00001d012158_P001 Maize extracellular, plasma membrane 40.67 38.28
Zm00001d042506_P002 Maize extracellular, plasma membrane 40.34 37.76
TraesCS3A01G397900.1 Wheat plasma membrane 39.22 36.99
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 35.08 36.94
TraesCS3B01G429900.1 Wheat plasma membrane 39.11 36.69
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 44.69 36.66
HORVU3Hr1G089510.1 Barley plasma membrane 38.88 36.59
TraesCS3D01G391800.1 Wheat mitochondrion 38.88 36.55
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 36.42 36.34
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 34.19 36.34
TraesCS1D01G010200.1 Wheat plastid 22.12 34.86
TraesCS1B01G059400.1 Wheat plastid 21.68 34.46
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 18.1 33.06
TraesCS1A01G011800.1 Wheat extracellular 19.55 32.83
HORVU1Hr1G002300.8 Barley plastid 25.7 31.77
Bra031838.1-P Field mustard cytosol 15.42 31.36
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 28.38 30.6
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.93 30.52
GSMUA_Achr7P23740_001 Banana plastid 39.55 29.52
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 27.04 29.4
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 26.37 29.24
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 26.15 28.68
Bra024640.1-P Field mustard vacuole 23.8 28.63
EES17525 Sorghum endoplasmic reticulum, plasma membrane 25.47 27.84
Bra039561.1-P Field mustard golgi 26.03 27.84
Bra029012.1-P Field mustard plasma membrane 26.59 27.71
Bra002969.1-P Field mustard plasma membrane 27.04 27.59
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 24.69 27.56
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 25.81 27.53
Bra017889.1-P Field mustard nucleus 20.22 22.91
Bra038438.1-P Field mustard extracellular 7.26 21.45
Zm00001d035757_P003 Maize plasma membrane 25.59 13.61
Bra007822.1-P Field mustard cytosol 16.09 12.88
Bra023204.1-P Field mustard cytosol 16.42 12.64
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 17.21 12.45
Bra002668.1-P Field mustard cytosol 15.75 10.91
Bra005952.1-P Field mustard nucleus 17.43 10.54
Bra020385.1-P Field mustard cytosol 15.87 10.17
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 17.65 9.71
Bra020386.1-P Field mustard cytosol 4.47 8.77
Bra009307.1-P Field mustard cytosol 7.6 8.43
Protein Annotations
EnsemblPlants:Bra000328.1EnsemblPlants:Bra000328.1-PEnsemblPlantsGene:Bra000328Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213PANTHER:PTHR23213:SF276PFAM:PF02181
PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447TMHMM:TMhelix
UniParc:UPI000253FD5AUniProt:M4C800MapMan:20.2.2.6.1:::
Description
AT2G43800 (E=5e-253) | formin homology 2 domain-containing protein / FH2 domain-containing protein
Coordinates
chrA03:+:10561399..10564306
Molecular Weight (calculated)
98208.8 Da
IEP (calculated)
8.641
GRAVY (calculated)
-0.463
Length
895 amino acids
Sequence
(BLAST)
001: MSKIPFLLRF AVIVFFIFSS YSSGDQRLNS RHLLHQPFYP IVTAAPPPLS SKPPSPSPDK QPPPPPPPPP LSSNPPSPSP DKPHHHKKHP AAAPPPQDKH
101: LFSSVTPPPP PPAPHSNPFF PSNAVHPSPP PPPPASIPTF PANISSLFFP PHNSSKPHTN NHHVAKLVSI TVSVVSSSVL LSLLVVLILY LRRTRRRRRL
201: PAYNTKSTRS DSLQLFNASP SDGARKHKQP HKHTSSNTSS DFLYLGTLVN SRSEGFAPQK SPVSRNVAGV LELPPVPASS SSSSSYSRNQ RPGSPELRPL
301: PPLPKLPAFS PTYLSPEHLF PKRQDFDGDD DEFFSPRGSS GRKQSPPRVV EDSGVVQSVN DSNSCSPTSF NDSPATSLKP TSLSPLSLHS ETSSNGSVLK
401: KTGPARPPPP PPPPPPPPQF SEVPAATSPS PPSDPDKKEE TLKPKLKALH WDKVRASSSR VMVWDQIKSN SFQVNEEMIE TLFRANDPSS RARDVGNAGV
501: VQSANQENQF LDPRKSHNIE ILLRALNVTA DEVCEALVEG NADMLGPELL ECLLKMAPTK EEEDKLKELK DDDESTTSKI GPAEKFLRAL LNIPLAFKRI
601: DAMLYIVNFD SETEYLKRSF HTLEIACGEL KNTRMFLKLL EAVLKTGNRM NIGTNRGDAH AFKLDTLLKL VDIKGADGKT TLLHFVVQEI IKSEGARVSS
701: TPIQSPIGDD DIAEQSAFQD EIELKKLGLQ VVSGLSSQLI NVKKAAAMDS TSLSKEIAEI SSGITKVKEV IMELKQETGV ERFLESMNSF LDKGEKVITE
801: IQSHGINVMK MVKEVTEYFH GNLESHPFRI FTVVRDFLTI LDQVCKEVGR VNERTVYGSR PSPSNQTVTP LFPVVNINHA ELSHDDDSFQ VITIG
Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.