Factsheet for Bra017889.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31597	Canola	mitochondrion	77.85	96.7
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	56.96	91.84
AT1G59910.1	Thale cress	nucleus	72.15	61.36
GSMUA_Achr6P04430_001	Banana	cytosol	26.84	49.88
Bra024640.1-P	Field mustard	vacuole	43.67	46.37
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	43.54	42.89
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	40.76	39.46
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	40.25	38.83
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	38.35	38.6
PGSC0003DMT400058304	Potato	plasma membrane	37.85	37.38
KRH45763	Soybean	endoplasmic reticulum, vacuole	35.82	35.82
GSMUA_Achr8P22610_001	Banana	plasma membrane	34.18	35.62
KRG99223	Soybean	golgi, vacuole	34.43	35.14
KRH69441	Soybean	golgi, plasma membrane	35.7	35.07
KRH74702	Soybean	endoplasmic reticulum	35.44	34.48
Bra029655.1-P	Field mustard	cytosol	12.53	32.67
EES05554	Sorghum	plasma membrane	36.46	31.3
Bra012246.1-P	Field mustard	cytosol	7.72	31.12
KXG39193	Sorghum	plastid	33.42	30.99
Zm00001d017983_P001	Maize	plasma membrane	35.82	30.73
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	34.94	30.63
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	34.94	30.63
TraesCS6A01G312000.2	Wheat	plastid	35.06	30.54
HORVU6Hr1G076870.4	Barley	plastid	35.32	29.78
Bra001256.1-P	Field mustard	plastid	14.05	29.13
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	24.3	23.53
Bra029012.1-P	Field mustard	plasma membrane	25.19	23.17
Bra039561.1-P	Field mustard	golgi	24.3	22.94
Bra002969.1-P	Field mustard	plasma membrane	24.68	22.23
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	22.53	21.73
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	24.43	21.52
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	21.52	20.66
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	22.28	20.54
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	22.91	20.22
Bra031838.1-P	Field mustard	cytosol	10.89	19.55
Bra038438.1-P	Field mustard	extracellular	7.34	19.14
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	22.78	16.5
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	16.46	16.11
Bra023204.1-P	Field mustard	cytosol	15.19	10.32
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	15.57	9.94
Bra007822.1-P	Field mustard	cytosol	13.04	9.21
Bra005952.1-P	Field mustard	nucleus	15.7	8.38
Bra002668.1-P	Field mustard	cytosol	13.29	8.13
Bra020385.1-P	Field mustard	cytosol	13.67	7.74
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.44	7.5
Bra009307.1-P	Field mustard	cytosol	6.58	6.44
Bra020386.1-P	Field mustard	cytosol	1.9	3.29

Protein Annotations

EnsemblPlants:Bra017889.1	EnsemblPlants:Bra017889.1-P	EnsemblPlantsGene:Bra017889	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF239	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI0002540DDC	UniProt:M4DN02	MapMan:20.2.2.6.1	:

Description

AT1G59910 (E=2e-208) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA03:+:31354005..31356742

Molecular Weight (calculated)

86001.8 Da

IEP (calculated)

9.487

GRAVY (calculated)

-0.621

Length

790 amino acids

Sequence
(BLAST)

001: MSFLFRKNGS SSGRRIKDKL RGRNSDRGKR EDEERVRYEG ALPPWGILFA EDFVRVDGNV KAVIVDEEGL DVIYWKKLLE IEKEEGIYRG SGSHHEEAFS
101: FHVKNSQSYS GGEVRDESNN NNNTSVDGER YYGKQSQSKF QAPGGGSGGG GPYPPLPLPP GLLAASSSTS SSPLTVNQTS PPSAGAPPPQ LAGAPPPQLA
201: GAPPLPIPAK KAPPPPSPPG KKAPGRPPPP PMSKSGPPKR PGNGKGPTKA AESSSAQPKL KPLHWDKVNP DASHSMVWHR IDGGSFNFDG DLMEALFGYV
301: GARKPSEANT VPHQPTVSTT QTYILDPRKS QNKAIVLKSL GMTKEEIIDL LTQGHDPDSD TLEKLSGIAP TPEEQTEITE FNGDPTKLAD AESLLFHILR
401: AVPSAFYRFN VMLFKINYGS EVAQQKASLQ TLESACNELR ARGLFMKLLE AILKAGNRMN AGTARGNAQA FNLTALRKLS DVKSVDGKTT LLHFVVEEVV
501: RSEGKRAAMN KISGGGIADA SREEQEIEFI KLGLPIIGGL SSEFTNVKKA AGVDYDSFIA TTLALGTRLK ETKRLLEQSK GKEDGCLTKL TSFFESAEEE
601: LRVITEEQLR IMDLVKKTTN YYQAGALKER NLFQLFVIIR DFLGMVDNAC SEIARTQRKQ RPAATVAAGA STSTAATPTA PAPQRNAVRF PILPPNFMSE
701: HSRVRETGSE VYDTTRPPPP LAAVPGEERE TRPREREGGA ARREREERRG EEREKEERDG AGGGERERRL GLLISGSSLQ GFASKFLMRN

Best Arabidopsis Sequence Match ( AT1G59910.1 )
(BLAST)

001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES

Arabidopsis Description

FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.