Factsheet for AT1G59910.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70125	Canola	cytosol	46.39	89.79
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	46.82	88.78
CDY55061	Canola	mitochondrion, nucleus	67.71	84.54
CDY31597	Canola	mitochondrion	55.33	80.82
CDY33614	Canola	mitochondrion, nucleus	66.85	80.65
CDY24501	Canola	mitochondrion, nucleus	69.97	80.35
Bra017889.1-P	Field mustard	nucleus	61.36	72.15
GSMUA_Achr6P04430_001	Banana	cytosol	23.14	50.59
AT1G70140.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	37.24	45.53
AT1G24150.2	Thale cress	endoplasmic reticulum	24.33	42.64
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	37.35	42.52
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	36.17	41.03
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	34.23	40.51
PGSC0003DMT400058304	Potato	plasma membrane	34.34	39.88
GSMUA_Achr8P22610_001	Banana	plasma membrane	31.0	37.99
KRH45763	Soybean	endoplasmic reticulum, vacuole	31.22	36.71
KRH69441	Soybean	golgi, plasma membrane	31.32	36.19
KRG99223	Soybean	golgi, vacuole	29.92	35.92
KRH74702	Soybean	endoplasmic reticulum	31.22	35.71
EES05554	Sorghum	plasma membrane	34.23	34.57
KXG39193	Sorghum	plastid	31.11	33.92
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	32.19	33.19
TraesCS6A01G312000.2	Wheat	plastid	32.29	33.08
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	31.97	32.96
Zm00001d017983_P001	Maize	plasma membrane	32.62	32.9
HORVU6Hr1G076870.4	Barley	plastid	32.4	32.12
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	22.82	23.56
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	21.96	22.69
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	20.45	21.49
AT3G32400.2	Thale cress	cytosol	10.87	20.4
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	19.48	20.25
AT5G07780.1	Thale cress	plastid	10.01	20.04
AT3G25493.1	Thale cress	vacuole	3.44	20.0
AT3G07540.1	Thale cress	plasma membrane	16.79	18.55
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	9.15	18.24
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	20.34	17.98
AT5G48360.1	Thale cress	extracellular, vacuole	14.85	17.65
AT5G07770.3	Thale cress	plastid	11.19	14.27
AT1G42980.1	Thale cress	cytosol	4.52	14.05
AT1G31810.1	Thale cress	cytosol	15.29	11.54
AT2G25050.1	Thale cress	cytosol	13.78	10.96
AT5G07760.2	Thale cress	cytosol, plastid	10.12	10.84
AT5G07650.1	Thale cress	cytosol	9.36	10.67
AT5G58160.1	Thale cress	cytosol	13.56	9.95
AT5G07740.2	Thale cress	nucleus	15.18	8.38
AT3G32420.1	Thale cress	cytosol	0.54	4.67

Protein Annotations

MapMan:20.2.2.6.1	EntrezGene:842285	ProteinID:AAD39332.1	ProteinID:AEE33639.1	ArrayExpress:AT1G59910	EnsemblPlantsGene:AT1G59910
RefSeq:AT1G59910	TAIR:AT1G59910	RefSeq:AT1G59910-TAIR-G	EnsemblPlants:AT1G59910.1	TAIR:AT1G59910.1	Unigene:At.11380
EMBL:BT010460	InterPro:FH2_Formin	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR015425	RefSeq:NP_176199.1
PFAM:PF02181	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS51444	PANTHER:PTHR23213
PANTHER:PTHR23213:SF239	UniProt:Q9XIE0	SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI00000A7E6A	SEG:seg

Description

FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]

Coordinates

chr1:-:22053863..22057268

Molecular Weight (calculated)

98587.5 Da

IEP (calculated)

8.956

GRAVY (calculated)

-0.657

Length

929 amino acids

Sequence
(BLAST)

001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.