Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14029 | Canola | cytosol | 63.87 | 87.33 |
| CDY40774 | Canola | cytosol | 47.59 | 86.04 |
| Bra005952.1-P | Field mustard | nucleus | 74.69 | 84.93 |
| CDX81069 | Canola | nucleus | 73.26 | 84.92 |
| CDX78309 | Canola | nucleus | 74.81 | 84.1 |
| PGSC0003DMT400063143 | Potato | cytosol | 14.79 | 79.3 |
| Bra028684.1-P | Field mustard | cytosol, nucleus, plasma membrane | 75.88 | 78.49 |
| Solyc03g115680.2.1 | Tomato | plastid | 23.35 | 75.58 |
| CDX99025 | Canola | cytosol | 52.05 | 75.13 |
| KRH03521 | Soybean | plastid | 29.41 | 73.12 |
| Bra009306.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 53.0 | 72.11 |
| CDX69994 | Canola | plastid | 50.33 | 71.36 |
| Solyc03g115670.1.1 | Tomato | cytosol, mitochondrion | 19.49 | 71.0 |
| AT5G07780.1 | Thale cress | plastid | 18.78 | 68.1 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 4.87 | 66.67 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 51.4 | 65.09 |
| Zm00001d030781_P001 | Maize | cytosol | 4.1 | 64.49 |
| KRH54596 | Soybean | extracellular | 48.66 | 63.64 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 11.47 | 63.07 |
| GSMUA_Achr7P26410_001 | Banana | endoplasmic reticulum, golgi | 17.83 | 61.73 |
| KRH56878 | Soybean | cytosol | 43.55 | 60.73 |
| KRH63288 | Soybean | cytosol | 32.68 | 58.14 |
| KRH03523 | Soybean | cytosol | 24.24 | 57.38 |
| AT3G32400.2 | Thale cress | cytosol | 16.82 | 57.17 |
| Zm00001d030780_P001 | Maize | cytosol | 5.59 | 52.81 |
| AT3G32420.1 | Thale cress | cytosol | 3.27 | 51.4 |
| Solyc07g005500.2.1 | Tomato | cytosol | 16.64 | 50.63 |
| GSMUA_Achr3P30260_001 | Banana | mitochondrion, plasma membrane | 31.37 | 48.8 |
| AT2G25050.1 | Thale cress | cytosol | 33.27 | 47.95 |
| GSMUA_Achr6P16780_001 | Banana | cytosol | 33.33 | 47.83 |
| AT1G31810.1 | Thale cress | cytosol | 34.76 | 47.56 |
| CDX69993 | Canola | cytosol | 34.22 | 47.49 |
| AT5G07770.3 | Thale cress | plastid | 20.44 | 47.19 |
| CDX99026 | Canola | cytosol | 35.06 | 46.42 |
| Os07t0596300-02 | Rice | plastid | 44.03 | 45.54 |
| OQU90190 | Sorghum | cytosol | 44.15 | 45.25 |
| AT5G58160.1 | Thale cress | cytosol | 33.45 | 44.47 |
| Zm00001d022040_P002 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 44.03 | 43.61 |
| Zm00001d006758_P003 | Maize | cytosol | 41.71 | 43.31 |
| AT1G42980.1 | Thale cress | cytosol | 7.66 | 43.14 |
| AT5G07650.1 | Thale cress | cytosol | 18.89 | 39.02 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 19.96 | 38.75 |
| GSMUA_Achr4P32680_001 | Banana | cytosol, mitochondrion | 37.91 | 36.54 |
| HORVU5Hr1G020180.51 | Barley | mitochondrion | 41.24 | 35.57 |
| KXG23793 | Sorghum | cytosol | 40.58 | 33.88 |
| Zm00001d041515_P003 | Maize | mitochondrion | 42.31 | 33.27 |
| Os04t0245000-00 | Rice | plasma membrane | 22.34 | 29.61 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 5.88 | 21.24 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 6.6 | 20.94 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 10.58 | 19.78 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 10.28 | 19.24 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 8.67 | 19.21 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 9.09 | 17.31 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 8.91 | 16.78 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 7.66 | 16.5 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 9.92 | 15.89 |
| AT1G59910.1 | Thale cress | nucleus | 8.38 | 15.18 |
| AT3G25493.1 | Thale cress | vacuole | 1.43 | 15.0 |
| AT3G07540.1 | Thale cress | plasma membrane | 7.13 | 14.27 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | EntrezGene:3770686 | UniProt:A0A1P8BD84 |
| ProteinID:ANM69558.1 | ArrayExpress:AT5G07740 | EnsemblPlantsGene:AT5G07740 | RefSeq:AT5G07740 | TAIR:AT5G07740 | RefSeq:AT5G07740-TAIR-G |
| EnsemblPlants:AT5G07740.2 | ncoils:Coil | InterPro:FH2_Formin | InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 |
| InterPro:IPR029023 | RefSeq:NP_001331227.1 | PFAM:PF02181 | PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 |
| PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 | SMART:SM01326 |
| SUPFAM:SSF101447 | SUPFAM:SSF49562 | SUPFAM:SSF52799 | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI0008490863 |
| SEG:seg | : | : | : | : | : |
Description
actin binding [Source:TAIR;Acc:AT5G07740]
Coordinates
chr5:-:2458568..2466813
Molecular Weight (calculated)
182567.0 Da
IEP (calculated)
7.625
GRAVY (calculated)
-0.587
Length
1683 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQVWWNYLI PLFSVYLILW RTKYNFIRLL IMMFFVQITE FKKSLNAVNS ACEEVRSSQK LKEIMKKILY LGNTLNQGTA RGAAVGFKLD
1501: SLSKLSDTRA ANSKMTLMHY LCKVLASKAS VLLDFPKDLE SLESASKIQL KSLAEEMQAI IKGLEKLNQE LTASESDGPV SDVFRKTLGD FISVAETEVA
1601: TVSSLYSVVG RNADALAHYF GEDPNRCPFE QVTATLLNFI RLFKKAHEEN VKQAELEKKK ALKEAEMEKA KGVNLTKKPV DDS
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQVWWNYLI PLFSVYLILW RTKYNFIRLL IMMFFVQITE FKKSLNAVNS ACEEVRSSQK LKEIMKKILY LGNTLNQGTA RGAAVGFKLD
1501: SLSKLSDTRA ANSKMTLMHY LCKVLASKAS VLLDFPKDLE SLESASKIQL KSLAEEMQAI IKGLEKLNQE LTASESDGPV SDVFRKTLGD FISVAETEVA
1601: TVSSLYSVVG RNADALAHYF GEDPNRCPFE QVTATLLNFI RLFKKAHEEN VKQAELEKKK ALKEAEMEKA KGVNLTKKPV DDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.