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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 96.04 92.16
CDX99025 Canola cytosol 85.26 86.79
CDX99029 Canola cytosol 1.1 81.25
CDY40774 Canola cytosol 56.87 72.5
PGSC0003DMT400063143 Potato cytosol 18.87 71.34
CDY14029 Canola cytosol 65.88 63.53
Solyc03g115680.2.1 Tomato plastid 27.46 62.69
Solyc03g115670.1.1 Tomato cytosol, mitochondrion 24.18 62.12
Zm00001d030781_P001 Maize cytosol 5.48 60.75
TraesCS5D01G089100.1 Wheat cytosol 15.59 60.46
KRH03521 Soybean plastid 34.37 60.27
PGSC0003DMT400083163 Potato cytosol, mitochondrion, nucleus 5.98 57.72
GSMUA_Achr7P26410_001 Banana endoplasmic reticulum, golgi 23.25 56.79
CDX81069 Canola nucleus 68.91 56.34
CDX78309 Canola nucleus 69.76 55.31
KRH54596 Soybean extracellular 56.11 51.75
VIT_17s0000g06640.t01 Wine grape cytosol, mitochondrion, plasma membrane, plastid 57.2 51.09
AT5G07740.2 Thale cress nucleus 71.36 50.33
KRH56878 Soybean cytosol 50.38 49.54
Zm00001d030780_P001 Maize cytosol 7.33 48.88
CDY27130 Canola cytosol, mitochondrion 15.84 47.84
KRH63288 Soybean cytosol 38.08 47.78
CDX69992 Canola cytosol 30.16 47.29
Solyc07g005500.2.1 Tomato cytosol 21.9 47.02
GSMUA_Achr3P30260_001 Banana mitochondrion, plasma membrane 40.61 44.55
KRH03523 Soybean cytosol 26.28 43.88
CDX69993 Canola cytosol 44.82 43.86
CDX76779 Canola cytosol 41.11 43.69
CDY12361 Canola cytosol 41.28 43.67
CDY49153 Canola cytosol 38.42 43.51
CDY34742 Canola cytosol 41.11 43.45
CDX99026 Canola cytosol 45.58 42.56
GSMUA_Achr6P16780_001 Banana cytosol 41.95 42.46
CDY02798 Canola cytosol 16.85 40.82
CDY32721 Canola cytosol 42.54 40.59
CDY02799 Canola cytosol 42.63 40.45
CDY62689 Canola cytosol 43.98 40.4
CDY12294 Canola cytosol 41.2 40.11
CDY43877 Canola cytosol 42.46 38.24
Os07t0596300-02 Rice plastid 51.31 37.43
OQU90190 Sorghum cytosol 50.8 36.72
Zm00001d006758_P003 Maize cytosol 48.61 35.6
Zm00001d022040_P002 Maize cytosol, mitochondrion, nucleus, plasma membrane 50.38 35.2
GSMUA_Achr4P32680_001 Banana cytosol, mitochondrion 48.44 32.93
CDX99027 Canola nucleus 21.15 29.08
HORVU5Hr1G020180.51 Barley mitochondrion 47.6 28.96
KXG23793 Sorghum cytosol 45.91 27.03
Zm00001d041515_P003 Maize mitochondrion 48.1 26.68
Os04t0245000-00 Rice plasma membrane 25.86 24.17
CDX94358 Canola mitochondrion, plastid 2.86 21.79
CDY22934 Canola nucleus, plastid 11.96 19.48
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 13.06 19.45
CDY70125 Canola cytosol 7.67 18.96
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 12.72 18.9
CDY05170 Canola extracellular, golgi, plasma membrane 11.71 18.66
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 9.6 18.15
CDY27766 Canola golgi, plasma membrane, vacuole 12.13 18.09
CDY43029 Canola plasma membrane 13.06 17.96
CDY43578 Canola endoplasmic reticulum, extracellular 12.64 17.86
CDY42470 Canola plasma membrane 12.89 17.81
CDY08720 Canola mitochondrion 10.87 17.74
CDY53556 Canola nucleus 12.55 17.63
CDY43811 Canola golgi 12.64 17.59
CDY18346 Canola plasma membrane 12.89 17.55
CDY37849 Canola endoplasmic reticulum 7.75 17.52
CDX79799 Canola mitochondrion, plastid, vacuole 11.54 17.25
CDY36494 Canola endoplasmic reticulum, vacuole 13.06 17.18
CDY44259 Canola plasma membrane, vacuole 12.13 17.08
CDX83457 Canola golgi, plasma membrane, vacuole 12.05 16.96
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 11.04 16.88
CDY40709 Canola endoplasmic reticulum, plasma membrane, vacuole 11.54 16.77
CDX74146 Canola extracellular, golgi, plasma membrane 11.29 16.69
CDY17909 Canola golgi, vacuole 11.79 16.51
CDY55061 Canola mitochondrion, nucleus 10.19 16.26
CDY31597 Canola mitochondrion 8.68 16.2
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 10.7 16.04
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 14.32 15.8
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 14.07 15.77
CDY35941 Canola plastid 9.94 15.75
CDY16239 Canola vacuole 9.27 15.67
CDY28040 Canola plastid 10.03 15.45
CDX74041 Canola golgi, plasma membrane, plastid 8.76 14.59
CDY24501 Canola mitochondrion, nucleus 9.77 14.34
CDY07990 Canola golgi, plasma membrane, plastid 8.59 14.13
CDY33614 Canola mitochondrion, nucleus 8.76 13.51
CDX86310 Canola endoplasmic reticulum, plasma membrane 9.1 13.38
CDX85333 Canola plasma membrane 9.27 13.37
Protein Annotations
Gene3D:1.20.58.2220Gene3D:2.60.40.1110MapMan:20.2.2.6.2Gene3D:3.90.190.10EnsemblPlants:CDX69994ProteinID:CDX69994
ProteinID:CDX69994.1ncoils:CoilInterPro:FH2_ForminEnsemblPlantsGene:GSBRNA2T00136084001InterPro:IPR014020InterPro:IPR015425
InterPro:IPR029021InterPro:IPR029023PFAM:PF02181PFAM:PF10409PFscan:PS51181PFscan:PS51182
PFscan:PS51444PANTHER:PTHR23213PANTHER:PTHR23213:SF271InterPro:Prot-tyrosine_phosphatase-likeSMART:SM00498SMART:SM01326
SUPFAM:SSF101447SUPFAM:SSF49562SUPFAM:SSF52799InterPro:Tensin_C2-domInterPro:Tensin_phosphataseUniParc:UPI0004EDCB86
SEG:seg:::::
Description
BnaA10g23430D
Coordinates
chrLK031790:+:2614840..2620664
Molecular Weight (calculated)
132339.0 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.478
Length
1187 amino acids
Sequence
(BLAST)
0001: MVWSCRVVSE PSLAPYLKST TFNRFASKIL GFHVAVENNH RRFGSHRMAM FRRLFYKKPP DHLLEISERV YVFDCCFSSD VMGEDEYKLY LGGIVAQLLK
0101: HFPNASFMVF NFKEGEQPSQ ISEVLSQYNM TVMEYPRQYE SCPLLPLEMI HHFLRSSESW LSLEGQQNFL LMHCERGGWP ILAFMLAGLL LYRKQYQGEM
0201: KTLEMVHRQA PKELLQILSP LNPQPSQLRY LQYISRVDWP PSDTPLLLDC LILSDLPHFD GRKGCRPVLR VYGQDPNAGP NRSSMLLFSA PKTNTHTRLY
0301: QQEECILVKL DIQCRVQGDV VLECIHLHDD LVREEMVFRI MFHTAFVRSD ALVVRRDEMD VLWEAKDQFP KEFKAEVLFS GADAVVPTIA TAPMSEDEKE
0401: DITSPEKFYE VEETFSHVID DHKIDSDKAS TDPVKDITVD DVQYRPDGKA DTNIDSVKDI EIDDGDEQRE RRTLEAKEND VEGSDSPNDI EPTTQETNTK
0501: INNPISEKTQ DGAAASPPPP SQNDSFFQTP QIPPSPPFAF ERPNSGIMLP PPPPFASEKP NSGIMLPPPP PPPTPPPPFA SSRRKSETML PPPPPPPPPW
0601: KSVDTSSFET HETCSTSYGS PPLPPPPPPF SKAHSVPPPP PPPPFSKAHS VPPPPPPHPP PPLTKAHSII PPPSYGSPPP PSYGPPVPPP PPPFSKTSPP
0701: PPPPPPFSSG GPPPPPMSAP PPPPPPMRGG PAPPMRGGAP PPPPGPRPPG VGPPPPPGPR PLGGGRGRGL LRPGVGPSIQ KKSSLKPLYW VKLARALQGS
0801: LWYEFERRGV GKIAQEFDVS EIETLFPATV PKPADKSGGR RKPIEAKPEK IQLIDLRRAN NTEIMLTKVK MPLPDMMAAV LAMDDTVLDI DQIENLVKFC
0901: PTNEEMELLK NYTGDKEMLG KCEQYFLELM KVPRVESKMR VFSFKIQFST QITEFKKSLN VVISACVEIR TSEKLKEIIQ RILYLGNIMN QGTARGAAVA
1001: FKLDSLLKLN DTRAVNSNTT LMHYLCKVIA TKASDLLDFH KDLESLETAS KIQLKSLAEE MQAISKGLEI LKQELTASES DVPLSEVFRK TLKEFISFAE
1101: DEVETVKSLY SDVGKNADLL SCYFGENPKN CTFEQVTATL LNFIRLFKKA HEENVKQVEL EKKKAAKEAG MVKAKGVSLR KKAVDDS
Best Arabidopsis Sequence Match ( AT5G07770.3 )
(BLAST)
001: MSLPSTLAMS SSITGADAVV TPPMRGRVPL PPPPPPPMRR SAPSPPPMSG RVPPPPPPPP MFDPKGAGRV ICCLRPGQNK SSLKRFQCGK LTNAWEELQR
101: HGEAQTAPEF DLSEIEALFS AAVQNQADKS GSRREAFEAN PDKLQLISGA DALVPLPPPP PPMPRRSPPP PPPRFDAFDH KGARMVCGFR CPVTKRSSLK
201: PLHWVKITRA LQGSLWDELQ IQYGESQTAI ELDVPEIETL FSVGAKPRPK PKPEKVPLID LKRANNTIVN LKILKMPLPD MMAAVMAMDE SVLDVDQIEN
301: LIQLCPTKEE MELLKNYTGD KATLGKSEQC LLELMKVPRF EAKLRVLSFK IPFGTKITKF RKMLNVVNSA CEEVRSSQML KEIMKIILFL GNTLNQGTAR
401: GSAVGFRLDS LLILSETRAD NNKMTLMHYL CKVLASKAAD LLDFHKDLQS LESTLEINLK SLAEEIHAIT KGLEKLKQEL TASETDGPVS QVFRKLLKDF
501: ISSAETQVAT VSTLYSSARI NADALAHYFG EDPNHYPFEK VSATLLSFIR LFKKAHQENV KQEDLEKKKA ATEDVFGGPD HNIDSDTSLD DSEAKSPSRI
601: RPPPSIPRPP SRPRYACCRI PAVNPPPRLV CGPYPLPRLV RVGSPSPPPP SMSGGAPPPP PPPPMLVASR TAPPPHLSHV RSIPFQTRLV MGTSPLPLLV
701: REGAPPPTLP SMSGGAPPPP PPLPMLRYQ
Arabidopsis Description
Actin-binding FH2 protein [Source:TAIR;Acc:AT5G07770]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.