CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002668.1-P	Field mustard	cytosol	100.0	100.0
CDY43877	Canola	cytosol	92.8	90.97
CDY02799	Canola	cytosol	82.12	84.81
CDY32721	Canola	cytosol	81.04	84.16
AT5G58160.1	Thale cress	cytosol	80.42	82.07
PGSC0003DMT400029052	Potato	cytosol	16.02	75.0
PGSC0003DMT400020452	Potato	cytosol	8.82	69.09
CDY02798	Canola	cytosol	24.69	65.1
CDX99029	Canola	cytosol	0.77	62.5
GSMUA_Achr1P25980_001	Banana	plasma membrane	12.93	59.01
VIT_11s0016g00160.t01	Wine grape	cytosol	49.61	55.55
KRH72294	Soybean	cytosol	50.46	53.93
KRH03063	Soybean	cytosol	49.23	52.65
CDX76779	Canola	cytosol	44.58	51.57
CDY34742	Canola	cytosol	44.66	51.38
CDY40774	Canola	cytosol	36.46	50.59
CDY27130	Canola	cytosol, mitochondrion	15.25	50.13
CDY12361	Canola	cytosol	39.71	45.72
Solyc12g010110.1.1	Tomato	cytosol	45.82	45.57
CDY49153	Canola	cytosol	36.92	45.52
CDX99025	Canola	cytosol	40.48	44.85
CDY14029	Canola	cytosol	42.26	44.35
TraesCS1A01G075600.1	Wheat	cytosol	47.37	44.09
TraesCS1D01G077900.1	Wheat	cytosol	47.76	44.04
CDX69994	Canola	plastid	40.4	43.98
TraesCS1B01G094200.1	Wheat	cytosol	47.37	43.62
Solyc07g005480.2.1	Tomato	vacuole	29.41	42.99
OQU80260	Sorghum	cytosol	36.76	41.89
CDY12294	Canola	cytosol	39.32	41.67
TraesCS6B01G389300.1	Wheat	cytosol	42.11	40.72
Os08t0280200-02	Rice	nucleus	28.02	40.54
TraesCS6D01G339300.1	Wheat	cytosol	41.72	40.37
Os02t0794900-00	Rice	cytosol	42.72	40.03
KXG31267	Sorghum	cytosol	45.2	39.17
Zm00001d032101_P001	Maize	cytosol	20.51	38.91
CDX81069	Canola	nucleus	43.27	38.5
CDX78309	Canola	nucleus	43.65	37.68
CDX69992	Canola	cytosol	21.67	36.99
CDX69993	Canola	cytosol	33.36	35.53
CDX99026	Canola	cytosol	33.75	34.3
HORVU5Hr1G123610.1	Barley	cytosol, plastid	0.93	30.0
CDX99027	Canola	nucleus	15.09	22.6
CDX94358	Canola	mitochondrion, plastid	2.63	21.79
CDY22934	Canola	nucleus, plastid	10.91	19.34
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	11.92	19.32
CDY37849	Canola	endoplasmic reticulum	7.82	19.24
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	11.84	19.15
CDY05170	Canola	extracellular, golgi, plasma membrane	10.99	19.06
CDY08720	Canola	mitochondrion	10.68	18.98
CDY42470	Canola	plasma membrane	12.46	18.74
CDY18346	Canola	plasma membrane	12.62	18.69
CDY43578	Canola	endoplasmic reticulum, extracellular	12.15	18.69
CDY43029	Canola	plasma membrane	12.46	18.66
CDY43811	Canola	golgi	12.23	18.52
CDY36494	Canola	endoplasmic reticulum, vacuole	12.69	18.18
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	8.82	18.15
CDY27766	Canola	golgi, plasma membrane, vacuole	11.15	18.09
CDX74146	Canola	extracellular, golgi, plasma membrane	11.22	18.06
CDY53556	Canola	nucleus	11.76	17.99
CDY35941	Canola	plastid	10.37	17.89
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	11.22	17.75
CDY28040	Canola	plastid	10.45	17.53
CDX74041	Canola	golgi, plasma membrane, plastid	9.6	17.39
CDY70125	Canola	cytosol	6.42	17.29
CDY07990	Canola	golgi, plasma membrane, plastid	9.52	17.04
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	10.06	16.75
CDX79799	Canola	mitochondrion, plastid, vacuole	10.29	16.75
CDY17909	Canola	golgi, vacuole	10.91	16.63
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.62	16.62
CDY16239	Canola	vacuole	8.98	16.52
CDX83457	Canola	golgi, plasma membrane, vacuole	10.76	16.49
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.7	16.45
CDY44259	Canola	plasma membrane, vacuole	10.68	16.37
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	9.91	16.16
CDY55061	Canola	mitochondrion, nucleus	8.82	15.32
CDX86310	Canola	endoplasmic reticulum, plasma membrane	8.98	14.37
CDX85333	Canola	plasma membrane	9.06	14.22
CDY24501	Canola	mitochondrion, nucleus	8.67	13.84
CDY33614	Canola	mitochondrion, nucleus	8.2	13.77
CDY31597	Canola	mitochondrion	6.73	13.68

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	UniProt:A0A078JDR8	EnsemblPlants:CDY62689
ProteinID:CDY62689	ProteinID:CDY62689.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00037496001	InterPro:IPR014020
InterPro:IPR015425	InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
UniParc:UPI000254533E	SEG:seg	:	:	:	:

Description

BnaA10g29220DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDR8]

Coordinates

chrLK034179:-:3421..9775

Molecular Weight (calculated)

142047.0 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.430

Length

1292 amino acids

Sequence
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF SSDSWEEENY KVYMAGVVNQ LQEHFPDASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPSN LLLMHCERGA WPVLAFMLAA LLIYRKQYSG ELKTLDMIYK QAPRELLQLF SPLNPMPSQC RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FVPDVSGQGG FRPIFRVYGQ DPLFVDDKKP KLLYSTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDLVRE VMLFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKDQFPKGFR VELLFSDMDA ASSVDVMDFS CLEEKDGLPI EVFSKVQELF NQVDWADQTD ATRNMLQHLA IANAVHERPE
0401: GGNSSPRLQG LSPRSIHDLV KQAAMDSNAK IKLSSVSEVE TVDSPEKQPT GTAKKFIAED THSVLQISSQ DATKLSGQES PSLKLVHHSA TVKPFVDGSE
0501: FSEKAEENNG KLVSFASSTP SLPHPTIASL PPVAAPPPPS PPPVPTVASQ PSEKLQHSVV QPAETVSQGN SWVSLAGSTF NQTTPNEKHP VTLPPTSLAS
0601: DVSPQESSRI TKSSSVLPSA TLSADPTKPP IGAPNDVASP LGQPARLPPP VSKSDKTHEL PQRPPPPPPP PPPPPPPMQY SDQNTVAAVS PPIPSPAPAI
0701: TASPVSNSDK THGLPRPPPP PPPPPMQHSD ENTVARVSPP VPPPPPAIAA SPPPPPPPAP PIPQSHGNSA MKSSPPAPPR PPAPPAPPNA PPPPGQMKAP
0801: SAPPPPPLGQ MRSPSAPPPP PKLGTKPSPS SGTGVPPTPA LPGGSLSSGK GRMLRVNSKN TAKKLKPYHW LKLTRAVNGS LWAETQMSSE ASKAPEIDMT
0901: ELESLFSSAP EEAGKSRLNS SRGPKPEKVQ LIEHRRAYNC EIMLSKVKVP LQDLMHSVLN LEESALDADQ VENLIKFCPT REEMELLKGY TGDVDKLGKC
1001: ELFFLEMMKV PRVETKLRVF SFKIQFRSQI SELKNSLSVV NSAAEQIKNS EKFKRIMQTV LSLGNALNQG TARGAAVGFK LDSLPKLSET RARNNRMTLM
1101: HYLCKILAEK MPEVLDFTKD LSSLEPSTKI QLKFLAEEMQ AINKGLEKVV QELSLSENDG PISHNFNKIL KEFLLYAEAE VRSLASLYSG VGRNVDGLIL
1201: YFGEDPAKCP FEQVVSTLLN FVRLFNRAHE ENGKQLEAEA KKKAEEEKSK TSEVDKESRK PLSLEEQVKK EKTKISGFDK ETKEPLDEGT PA

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.