Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99029 | Canola | cytosol | 1.39 | 75.0 |
| Solyc06g069660.1.1 | Tomato | mitochondrion | 22.36 | 56.76 |
| TraesCS2A01G182900.1 | Wheat | cytosol, golgi, nucleus | 19.24 | 46.76 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 19.12 | 46.48 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 19.0 | 46.2 |
| Bra009307.1-P | Field mustard | cytosol | 39.86 | 42.63 |
| AT3G32420.1 | Thale cress | cytosol | 4.98 | 40.19 |
| Zm00001d017027_P001 | Maize | cytosol | 10.54 | 38.08 |
| CDX69992 | Canola | cytosol | 30.82 | 35.14 |
| CDY02798 | Canola | cytosol | 17.73 | 31.22 |
| CDY40774 | Canola | cytosol | 26.77 | 24.81 |
| CDX69993 | Canola | cytosol | 31.63 | 22.51 |
| CDX99025 | Canola | cytosol | 29.66 | 21.96 |
| CDX99026 | Canola | cytosol | 31.87 | 21.64 |
| CDY14029 | Canola | cytosol | 30.36 | 21.28 |
| CDX69994 | Canola | plastid | 29.08 | 21.15 |
| GSMUA_Achr7P26420_001 | Banana | cytosol, mitochondrion | 21.44 | 19.87 |
| CDX81069 | Canola | nucleus | 30.48 | 18.11 |
| CDX78309 | Canola | nucleus | 30.82 | 17.77 |
| CDY34742 | Canola | cytosol | 21.32 | 16.38 |
| CDX76779 | Canola | cytosol | 21.21 | 16.38 |
| HORVU2Hr1G034470.10 | Barley | cytosol | 21.21 | 15.78 |
| CDY02799 | Canola | cytosol | 22.48 | 15.51 |
| CDY32721 | Canola | cytosol | 21.9 | 15.19 |
| CDY12361 | Canola | cytosol | 19.7 | 15.15 |
| CDY62689 | Canola | cytosol | 22.6 | 15.09 |
| CDY49153 | Canola | cytosol | 18.19 | 14.98 |
| CDY43877 | Canola | cytosol | 21.78 | 14.26 |
| CDY12294 | Canola | cytosol | 19.81 | 14.03 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 6.49 | 5.29 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 6.49 | 5.2 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 4.75 | 5.16 |
| CDY16239 | Canola | vacuole | 4.17 | 5.13 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 3.71 | 5.1 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 4.63 | 5.01 |
| CDY42470 | Canola | plasma membrane | 4.98 | 5.01 |
| CDY43029 | Canola | plasma membrane | 4.98 | 4.98 |
| CDY17909 | Canola | golgi, vacuole | 4.75 | 4.83 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 4.4 | 4.77 |
| CDY18346 | Canola | plasma membrane | 4.75 | 4.7 |
| CDY43811 | Canola | golgi | 4.4 | 4.45 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 3.82 | 4.43 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 4.29 | 4.39 |
| CDY53556 | Canola | nucleus | 4.29 | 4.38 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 4.52 | 4.32 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 3.82 | 4.17 |
| CDY44259 | Canola | plasma membrane, vacuole | 4.06 | 4.15 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 3.82 | 4.15 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 3.48 | 3.87 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 3.13 | 3.79 |
| CDY28040 | Canola | plastid | 3.36 | 3.77 |
| CDY22934 | Canola | nucleus, plastid | 3.13 | 3.7 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 3.59 | 3.69 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 3.36 | 3.61 |
| CDY35941 | Canola | plastid | 3.01 | 3.47 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 2.9 | 3.46 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 3.24 | 3.43 |
| CDY55061 | Canola | mitochondrion, nucleus | 2.9 | 3.36 |
| CDX85333 | Canola | plasma membrane | 2.67 | 2.79 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 2.55 | 2.73 |
| CDY24501 | Canola | mitochondrion, nucleus | 2.55 | 2.72 |
| CDY33614 | Canola | mitochondrion, nucleus | 2.2 | 2.47 |
| Solyc06g069670.2.1 | Tomato | nucleus | 2.43 | 2.27 |
| CDY31597 | Canola | mitochondrion | 1.62 | 2.2 |
| CDY08720 | Canola | mitochondrion | 1.85 | 2.2 |
| CDY27130 | Canola | cytosol, mitochondrion | 0.58 | 1.27 |
| CDY37849 | Canola | endoplasmic reticulum | 0.7 | 1.14 |
| CDY70125 | Canola | cytosol | 0.46 | 0.83 |
| TraesCS2A01G183000.1 | Wheat | cytosol | 0.35 | 0.74 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 0.35 | 0.74 |
| TraesCS2D01G190800.1 | Wheat | cytosol | 0.35 | 0.74 |
| CDX94358 | Canola | mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99027 | EnsemblPlantsGene:GSBRNA2T00107154001 | Gene3D:2.60.40.1110 | Gene3D:3.90.190.10 | InterPro:IPR014020 | InterPro:IPR029021 |
| InterPro:IPR029023 | InterPro:Prot-tyrosine_phosphatase-like | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 |
| PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | ProteinID:CDX99027 | ProteinID:CDX99027.1 | SEG:seg |
| SMART:SM01326 | SUPFAM:SSF49562 | UniParc:UPI0004EE4F2C | MapMan:35.1 | : | : |
Description
BnaC09g48080D
Coordinates
chrLK031907:+:1198535..1205281
Molecular Weight (calculated)
98914.9 Da
IEP (calculated)
8.718
GRAVY (calculated)
-0.645
Length
863 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLFRKHFYR KAQDRLVEIS EHVYAFDCCF SCDVMGDDEY KLYLDGIVAQ LHDHYPDASF MVCNFRAGYQ RSRISTLLSQ YRMWVMDYPN QQGSVPLLPL
101: QVISQFLISS ESWLGQQNVM LMHCERGSLP LLDFMLSALL LYIDRYHGDQ KTLELAYNQG SMELLRHASS LNPRPSQLRY LQYISTSSEW PSSEAPLLLD
201: CLILKGLSHF EWRRDWRPSL RVFGQDPKAR ACTCRSSILL FSTPKTDHMY QQEECILVML DIQCRVQGDV VLEFVNLSDN LVCEEMIFRI MFHTAFVRGN
301: VLKVRRTMMD ILWDAKDEFP KELEAEVSAP DNVSEIEAFS EELEKMEAVK ETRMKKAKGA SDVNISSFAV DNVNLNKRGE VDLEPSLPGT KPEKISPSKS
401: FADRSFTGFS PRRRRRGSEG IPPISFNVRI HGIPLHFWSE GTIRTIGEQL GKSSIKDEKD ARIWVEVNGL EPLIMKMDIE LPTDEITEVE LEYLKIEKHC
501: FTCFSLFHEE LDCPHRPLNA LPPKERLLGI TQSIALQRIE AEKRRHDDRR GYRRPEELRS VSRQNEDNYG QAERNRTNGR DGQIKRYDYG RHRSIISRTA
601: RSSSDYVRSK APSLQYRVVE RNRPSSVSST PHHQIQRLDD DDLRAHLQPQ PVETLPSDHG TDITPTRTVK DRLGVPSNFK AASNSGSKER KSALERISDP
701: IQTKELSARR ASNFESGRLQ EVESRGEEEA PMDQDQTEDQ ITRTERIPAP LRLGANNSAK KNRRDGIPIA AQSKVASKRR ITNPLKKRVA RSPLLGLNQR
801: RVTPVRASTS ARRKLIVEKD KEIPCDKGGI SKQHKESSRP TTVFIPGSTR GGVDFRPHQT SLP
101: QVISQFLISS ESWLGQQNVM LMHCERGSLP LLDFMLSALL LYIDRYHGDQ KTLELAYNQG SMELLRHASS LNPRPSQLRY LQYISTSSEW PSSEAPLLLD
201: CLILKGLSHF EWRRDWRPSL RVFGQDPKAR ACTCRSSILL FSTPKTDHMY QQEECILVML DIQCRVQGDV VLEFVNLSDN LVCEEMIFRI MFHTAFVRGN
301: VLKVRRTMMD ILWDAKDEFP KELEAEVSAP DNVSEIEAFS EELEKMEAVK ETRMKKAKGA SDVNISSFAV DNVNLNKRGE VDLEPSLPGT KPEKISPSKS
401: FADRSFTGFS PRRRRRGSEG IPPISFNVRI HGIPLHFWSE GTIRTIGEQL GKSSIKDEKD ARIWVEVNGL EPLIMKMDIE LPTDEITEVE LEYLKIEKHC
501: FTCFSLFHEE LDCPHRPLNA LPPKERLLGI TQSIALQRIE AEKRRHDDRR GYRRPEELRS VSRQNEDNYG QAERNRTNGR DGQIKRYDYG RHRSIISRTA
601: RSSSDYVRSK APSLQYRVVE RNRPSSVSST PHHQIQRLDD DDLRAHLQPQ PVETLPSDHG TDITPTRTVK DRLGVPSNFK AASNSGSKER KSALERISDP
701: IQTKELSARR ASNFESGRLQ EVESRGEEEA PMDQDQTEDQ ITRTERIPAP LRLGANNSAK KNRRDGIPIA AQSKVASKRR ITNPLKKRVA RSPLLGLNQR
801: RVTPVRASTS ARRKLIVEKD KEIPCDKGGI SKQHKESSRP TTVFIPGSTR GGVDFRPHQT SLP
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Arabidopsis Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.