CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02799	Canola	cytosol	94.13	93.61
Bra020385.1-P	Field mustard	cytosol	93.41	83.24
CDY62689	Canola	cytosol	84.16	81.04
AT5G58160.1	Thale cress	cytosol	80.79	79.38
CDY43877	Canola	cytosol	83.04	78.38
PGSC0003DMT400029052	Potato	cytosol	16.08	72.46
CDY02798	Canola	cytosol	26.29	66.73
PGSC0003DMT400020452	Potato	cytosol	8.68	65.45
CDX99029	Canola	cytosol	0.8	62.5
GSMUA_Achr1P25980_001	Banana	plasma membrane	13.5	59.36
VIT_11s0016g00160.t01	Wine grape	cytosol	50.64	54.59
KRH72294	Soybean	cytosol	51.45	52.94
KRH03063	Soybean	cytosol	50.24	51.74
CDX76779	Canola	cytosol	45.18	50.31
CDY34742	Canola	cytosol	45.42	50.31
CDY40774	Canola	cytosol	36.9	49.3
CDY27130	Canola	cytosol, mitochondrion	15.51	49.11
CDY12361	Canola	cytosol	39.95	44.3
Solyc12g010110.1.1	Tomato	cytosol	45.98	44.03
CDX99025	Canola	cytosol	41.16	43.91
CDY49153	Canola	cytosol	36.74	43.61
CDY14029	Canola	cytosol	42.36	42.81
TraesCS1A01G075600.1	Wheat	cytosol	47.59	42.65
CDX69994	Canola	plastid	40.59	42.54
TraesCS1D01G077900.1	Wheat	cytosol	47.91	42.54
TraesCS1B01G094200.1	Wheat	cytosol	47.35	41.98
Solyc07g005480.2.1	Tomato	vacuole	29.26	41.18
OQU80260	Sorghum	cytosol	37.3	40.92
CDY12294	Canola	cytosol	39.55	40.36
TraesCS6B01G389300.1	Wheat	cytosol	42.36	39.45
Os08t0280200-02	Rice	nucleus	28.3	39.42
TraesCS6D01G339300.1	Wheat	cytosol	42.04	39.18
Os02t0794900-00	Rice	cytosol	42.77	38.58
Zm00001d032101_P001	Maize	cytosol	20.58	37.59
KXG31267	Sorghum	cytosol	44.94	37.49
CDX81069	Canola	nucleus	43.25	37.05
CDX78309	Canola	nucleus	43.97	36.54
CDX69992	Canola	cytosol	21.86	35.93
CDX69993	Canola	cytosol	33.84	34.71
CDX99026	Canola	cytosol	33.92	33.2
HORVU5Hr1G123610.1	Barley	cytosol, plastid	0.88	27.5
CDX99027	Canola	nucleus	15.19	21.9
CDX94358	Canola	mitochondrion, plastid	2.65	21.15
CDY22934	Canola	nucleus, plastid	11.33	19.34
CDY37849	Canola	endoplasmic reticulum	8.04	19.05
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	12.06	18.82
CDY42470	Canola	plasma membrane	12.94	18.74
CDY18346	Canola	plasma membrane	13.1	18.69
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	11.98	18.65
CDY43811	Canola	golgi	12.7	18.52
CDY43029	Canola	plasma membrane	12.78	18.42
CDY08720	Canola	mitochondrion	10.69	18.29
CDY05170	Canola	extracellular, golgi, plasma membrane	10.85	18.12
CDY43578	Canola	endoplasmic reticulum, extracellular	12.22	18.1
CDY53556	Canola	nucleus	12.22	17.99
CDY36494	Canola	endoplasmic reticulum, vacuole	12.86	17.74
CDY70125	Canola	cytosol	6.75	17.5
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	8.76	17.36
CDY27766	Canola	golgi, plasma membrane, vacuole	11.09	17.34
CDX74146	Canola	extracellular, golgi, plasma membrane	11.09	17.19
CDY35941	Canola	plastid	10.21	16.96
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	11.09	16.89
CDX74041	Canola	golgi, plasma membrane, plastid	9.65	16.83
CDY28040	Canola	plastid	10.37	16.75
CDX79799	Canola	mitochondrion, plastid, vacuole	10.53	16.5
CDX83457	Canola	golgi, plasma membrane, vacuole	11.17	16.49
CDY07990	Canola	golgi, plasma membrane, plastid	9.57	16.48
CDY16239	Canola	vacuole	9.24	16.38
CDY44259	Canola	plasma membrane, vacuole	11.01	16.25
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	10.13	16.24
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.91	16.08
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.67	16.05
CDY17909	Canola	golgi, vacuole	10.93	16.04
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	10.21	16.04
CDY55061	Canola	mitochondrion, nucleus	9.32	15.59
CDX86310	Canola	endoplasmic reticulum, plasma membrane	9.57	14.75
CDX85333	Canola	plasma membrane	9.73	14.7
CDY24501	Canola	mitochondrion, nucleus	9.16	14.09
CDY33614	Canola	mitochondrion, nucleus	8.68	14.03
CDY31597	Canola	mitochondrion	7.15	13.99

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	UniProt:A0A078H4E8	EnsemblPlants:CDY32721
ProteinID:CDY32721	ProteinID:CDY32721.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00052771001	InterPro:IPR014020
InterPro:IPR015425	InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase
UniParc:UPI0004EE69D1	SEG:seg	:	:	:	:

Description

BnaA02g07830DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4E8]

Coordinates

chrLK032298:-:335037..340893

Molecular Weight (calculated)

137711.0 Da

IEP (calculated)

6.768

GRAVY (calculated)

-0.445

Length

1244 amino acids

Sequence
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF SDDSWEEDNY KTYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCERGA WPVLAFMLAA LLIYRKQYSG EYKTLDMICK QAPRELMHLF SPLNPIPSQL RYLQYVSRRN VVSEWPPLDR
0201: ALTMDCVILR CVPDVSGQGG CRPIFRVYGQ DPFFVDDKKP KLLYSTPKKG KHLRIYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRAVFNT
0301: AFIRSNILML NRDEVDTLWD IKEQFPKGFR VELLFSDMDA ASSVDSMNFS CLEEKDGLPI EVFSKVHDFF NQVDWDDQTD ATRNMLQHLA IANAAQERPD
0401: GNLSPRPQGL SPKSIHDIVK QAAIENNAKL KLSSTSEVET IDTPEKRASG SVKKLIAEDM HSVLQISIQA NTTSHEPASL KLMHHSATVK PFVEGSDFSE
0501: NAEENISSPP RENRSTLSPP HAERTSLVPQ GAPSPPPPLP TVASQPSEKL RHSVVQPAET FSQGNAWVSL AGSTFHRTTP NEEQPMTLPS TSLPLPPASD
0601: VTTQESSKIT KSSSVMPSPT LSATPAKESQ TETSGSFCPP ASPPIGAPND VASPLGQPVR PPPSVSSDKT PALPRPPPPP PPPPMQHSLE ALASTLSPQL
0701: AIAASPPPPP PPAPPTPPRL PTSSAPPPPP PPPPNAPPPI GQMKTPSAPP PPPPLGQMRP PSAPPPPPPP KLGTKSSPST GSSVPPTPGL PAGPLSSGKG
0801: RTLLVNPKNN TAKKLKPYHW LKLTRAVNGS LWAETQMSSE ASKAPEIDMT ELESLFSASA PEEAGKSKLN SCRGPKPEKV QLIEHRRAYN CEIMLSKVKV
0901: PLQDLMYSVL NLEESALDAD QVENLIKFCP TREEMELLKG YNGDKDKLGK CELFFLEMMK VPRVETKLRV FSFKIQFRSQ ISELRNSLSV VNSAAEQVKN
1001: SEKFKRIMQT VLSLGNALNQ GTARGAAVGF KLDSLPKLSE TRARNNRMTL MHYLCKILAE KMPEVLDFAK DFSSLEPATK IQLKFLAEEM QAINKGLEKI
1101: VQELSLSESD GPISHNFNKI LKEFLHYAEA EVRSLASLYS GVGRNVDGLI FYFGEDPTKC PFEQGVSTLL NFVRLFNRAH EENVKQLEAE AKKKAEEEKL
1201: KIGRGLDQES RKPLSLDEQA KQEKAKINGL DQETKEPLNE RTAA

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.