Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 95.3 | 89.2 |
| Bra039436.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 95.84 | 87.18 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 81.75 | 75.84 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 82.15 | 74.91 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 85.77 | 72.29 |
| GSMUA_Achr7P18740_001 | Banana | nucleus | 39.73 | 58.04 |
| CDX94358 | Canola | mitochondrion, plastid | 10.2 | 48.72 |
| KRG96818 | Soybean | plasma membrane | 47.38 | 44.63 |
| KRG92894 | Soybean | endoplasmic reticulum, vacuole | 52.75 | 44.06 |
| KRH68527 | Soybean | plasma membrane | 46.85 | 43.9 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 55.3 | 43.01 |
| KRH33895 | Soybean | plasma membrane | 52.62 | 42.66 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 50.47 | 41.78 |
| Solyc01g099650.2.1 | Tomato | nucleus | 50.6 | 41.75 |
| Os04t0461800-01 | Rice | extracellular | 43.22 | 38.66 |
| TraesCS2B01G344200.1 | Wheat | golgi | 42.55 | 37.87 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 42.68 | 37.77 |
| Zm00001d003406_P002 | Maize | plasma membrane | 42.42 | 37.57 |
| EES12298 | Sorghum | plasma membrane | 42.95 | 37.56 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 42.95 | 35.24 |
| CDY37849 | Canola | endoplasmic reticulum | 24.56 | 34.86 |
| CDY70125 | Canola | cytosol | 20.54 | 31.88 |
| EES13879 | Sorghum | golgi | 38.12 | 31.28 |
| CDY08720 | Canola | mitochondrion | 30.34 | 31.09 |
| Zm00001d032225_P001 | Maize | golgi | 37.18 | 31.05 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 34.36 | 30.48 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 34.77 | 28.71 |
| CDY22934 | Canola | nucleus, plastid | 28.05 | 28.67 |
| Os08t0431200-00 | Rice | cytosol | 19.33 | 27.69 |
| CDY44259 | Canola | plasma membrane, vacuole | 31.28 | 27.64 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 31.14 | 27.52 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 28.86 | 27.08 |
| CDY42470 | Canola | plasma membrane | 31.14 | 27.01 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.86 | 26.98 |
| CDY17909 | Canola | golgi, vacuole | 30.6 | 26.89 |
| CDY43811 | Canola | golgi | 30.34 | 26.49 |
| CDY18346 | Canola | plasma membrane | 31.01 | 26.49 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.19 | 26.28 |
| CDY43029 | Canola | plasma membrane | 30.34 | 26.19 |
| CDY53556 | Canola | nucleus | 29.26 | 25.8 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.31 | 25.26 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 20.27 | 24.04 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 33.96 | 23.89 |
| CDY31597 | Canola | mitochondrion | 20.27 | 23.74 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 25.23 | 23.74 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 33.96 | 23.51 |
| CDY55061 | Canola | mitochondrion, nucleus | 23.22 | 23.25 |
| CDY16239 | Canola | vacuole | 21.61 | 22.93 |
| CDY35941 | Canola | plastid | 22.68 | 22.56 |
| CDY28040 | Canola | plastid | 23.09 | 22.34 |
| CDY33614 | Canola | mitochondrion, nucleus | 22.55 | 21.82 |
| CDY24501 | Canola | mitochondrion, nucleus | 23.62 | 21.76 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 20.67 | 21.33 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 20.4 | 21.32 |
| CDX85333 | Canola | plasma membrane | 22.95 | 20.78 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 22.01 | 20.32 |
| CDY27130 | Canola | cytosol, mitochondrion | 10.47 | 19.85 |
| CDY34742 | Canola | cytosol | 19.46 | 12.91 |
| CDX76779 | Canola | cytosol | 19.06 | 12.71 |
| CDY12361 | Canola | cytosol | 19.06 | 12.66 |
| CDY49153 | Canola | cytosol | 17.32 | 12.31 |
| CDX99025 | Canola | cytosol | 18.93 | 12.09 |
| CDY14029 | Canola | cytosol | 19.6 | 11.86 |
| CDY40774 | Canola | cytosol | 14.77 | 11.82 |
| CDX69994 | Canola | plastid | 18.66 | 11.71 |
| CDY12294 | Canola | cytosol | 19.06 | 11.65 |
| CDY02799 | Canola | cytosol | 18.93 | 11.27 |
| CDY62689 | Canola | cytosol | 19.06 | 10.99 |
| CDY32721 | Canola | cytosol | 18.12 | 10.85 |
| CDX69993 | Canola | cytosol | 17.58 | 10.8 |
| CDX99026 | Canola | cytosol | 17.72 | 10.39 |
| CDY43877 | Canola | cytosol | 17.72 | 10.02 |
| CDX81069 | Canola | nucleus | 19.33 | 9.92 |
| CDX78309 | Canola | nucleus | 19.87 | 9.89 |
| CDX69992 | Canola | cytosol | 7.52 | 7.4 |
| CDY02798 | Canola | cytosol | 4.56 | 6.94 |
| CDX99027 | Canola | nucleus | 4.43 | 3.82 |
| CDX99029 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY05170 | EnsemblPlantsGene:GSBRNA2T00119972001 | Gene3D:1.20.58.2220 | GO:A0A078ET75 | InterPro:FH2_Formin | InterPro:IPR015425 |
| ncoils:Coil | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF177 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDY05170 |
| ProteinID:CDY05170.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix |
| UniParc:UPI0004EE6FB2 | MapMan:20.2.2.6.1 | : | : | : | : |
Description
BnaC05g46330D
Coordinates
chrLK031960:-:142344..145319
Molecular Weight (calculated)
82717.3 Da
IEP (calculated)
7.606
GRAVY (calculated)
-0.414
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYFRQIFLM IIVVAISLQC CSICADERYR TQIGKLVGED GGEKRKFAVL EKFRALLDLI KPSTPRRRNL AASAPYPPWP APSPSPYPKG GPVESPAYSP
101: APQRPIPPHL RRPLPQRTHP PGQHEIQCRK HEKGGVFVPL VVSTACGIGF VVCVVVVSVL VKETENDNEL REEEVKTSVE TEILLDSDNA GSYSTKEIVS
201: VQEKTEHSVS ASEDEESFHS VGDGSQYSNP RLSNASSSSV SGIGSFSQRF SERELDIPEC SGISHPPPPP PPPPQLLQFS NRGLLHTPSS PETAKPRTLS
301: SQLSARVCAS SSKPLPPPPP PQPPPLSQQQ QPQVMNKAPP PPLSLDFTQR TPLGKDGAPL PKLKPLHWDK VRATPDRTMV WDKIRTSSFE FDEEMIESLF
401: GYTMQTSSKN EEGRCKTPSP GKHLLEPKRL QNFTILLKAL NATADQICSA LGKGEGLCLQ QLEALVKMVP TKEEELKLCS YKGAVDELGS AEKFLRALVG
501: VPFAFQRAEA MLYRETFEDE VVHLRNSFSM LEEACKELKS SRLFLKLLEA VLKTGNRMNV GTIRGGAKAF KLDALLKLSD VKGTDGKTTL LHFVVQEISR
601: SEGIRDYRRM GLDLVSGLNT ELRNVKKTAT IDLEGLVSSV SNLRDGLEQL RCLASNEENR AFSSMSSFLR YGEKSLEELR EDEERIMERV GEIAEYFHGD
701: VRGDDKNPLR IFVIVRDFLG MLDQVCRELR CVRVPNSPSP LAPFR
101: APQRPIPPHL RRPLPQRTHP PGQHEIQCRK HEKGGVFVPL VVSTACGIGF VVCVVVVSVL VKETENDNEL REEEVKTSVE TEILLDSDNA GSYSTKEIVS
201: VQEKTEHSVS ASEDEESFHS VGDGSQYSNP RLSNASSSSV SGIGSFSQRF SERELDIPEC SGISHPPPPP PPPPQLLQFS NRGLLHTPSS PETAKPRTLS
301: SQLSARVCAS SSKPLPPPPP PQPPPLSQQQ QPQVMNKAPP PPLSLDFTQR TPLGKDGAPL PKLKPLHWDK VRATPDRTMV WDKIRTSSFE FDEEMIESLF
401: GYTMQTSSKN EEGRCKTPSP GKHLLEPKRL QNFTILLKAL NATADQICSA LGKGEGLCLQ QLEALVKMVP TKEEELKLCS YKGAVDELGS AEKFLRALVG
501: VPFAFQRAEA MLYRETFEDE VVHLRNSFSM LEEACKELKS SRLFLKLLEA VLKTGNRMNV GTIRGGAKAF KLDALLKLSD VKGTDGKTTL LHFVVQEISR
601: SEGIRDYRRM GLDLVSGLNT ELRNVKKTAT IDLEGLVSSV SNLRDGLEQL RCLASNEENR AFSSMSSFLR YGEKSLEELR EDEERIMERV GEIAEYFHGD
701: VRGDDKNPLR IFVIVRDFLG MLDQVCRELR CVRVPNSPSP LAPFR
001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
Arabidopsis Description
FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.