Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 99.5 | 99.5 |
| CDX85333 | Canola | plasma membrane | 93.18 | 91.37 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 65.68 | 67.77 |
| CDY35941 | Canola | plastid | 45.85 | 49.4 |
| CDY28040 | Canola | plastid | 46.72 | 48.96 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 42.01 | 47.55 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 41.88 | 46.81 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 21.81 | 40.93 |
| PGSC0003DMT400056393 | Potato | cytosol | 22.8 | 38.33 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 26.39 | 37.83 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 18.71 | 34.4 |
| Os01t0897700-01 | Rice | cytosol | 10.16 | 33.61 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 29.74 | 33.2 |
| CDY37849 | Canola | endoplasmic reticulum | 21.31 | 32.76 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 6.07 | 32.03 |
| CDX94358 | Canola | mitochondrion, plastid | 6.07 | 31.41 |
| GSMUA_Achr10P... | Banana | plastid | 31.1 | 31.26 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 34.94 | 31.02 |
| KRH47952 | Soybean | cytosol | 29.62 | 30.8 |
| CDY08720 | Canola | mitochondrion | 27.51 | 30.54 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 25.28 | 30.4 |
| Solyc06g082910.2.1 | Tomato | extracellular | 34.94 | 30.13 |
| TraesCS1D01G010200.1 | Wheat | plastid | 21.19 | 30.11 |
| Zm00001d021173_P001 | Maize | plasma membrane | 28.38 | 30.05 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 34.94 | 29.87 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 29.0 | 29.7 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 28.75 | 29.52 |
| TraesCS1B01G059400.1 | Wheat | plastid | 20.57 | 29.48 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 30.36 | 29.2 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 34.32 | 29.19 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 30.36 | 29.17 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 28.38 | 29.1 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 34.32 | 29.04 |
| TraesCS5A01G304700.1 | Wheat | golgi | 28.25 | 28.97 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 28.5 | 28.97 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 34.08 | 28.92 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 33.58 | 28.83 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 36.93 | 28.68 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 38.17 | 28.54 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 33.58 | 28.5 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 29.74 | 28.47 |
| CDY17909 | Canola | golgi, vacuole | 29.74 | 28.3 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 33.33 | 28.14 |
| CDY44259 | Canola | plasma membrane, vacuole | 29.37 | 28.11 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 36.06 | 28.06 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 32.96 | 27.94 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 31.1 | 27.83 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 18.34 | 27.77 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 28.75 | 27.55 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 36.06 | 27.48 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 28.87 | 27.41 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 36.43 | 27.32 |
| HORVU1Hr1G002300.8 | Barley | plastid | 23.67 | 26.38 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 25.03 | 24.34 |
| CDY70125 | Canola | cytosol | 14.13 | 23.75 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 24.54 | 23.6 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 22.3 | 22.42 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 20.32 | 22.01 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 22.3 | 21.98 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.69 | 21.96 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.18 | 21.91 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 21.44 | 21.73 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.44 | 21.65 |
| CDY22934 | Canola | nucleus, plastid | 19.45 | 21.54 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.69 | 21.52 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 16.48 | 21.18 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 31.23 | 21.02 |
| CDY43811 | Canola | golgi | 22.06 | 20.87 |
| CDY43029 | Canola | plasma membrane | 22.18 | 20.74 |
| CDY42470 | Canola | plasma membrane | 21.69 | 20.37 |
| CDY16239 | Canola | vacuole | 17.72 | 20.37 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 19.95 | 20.33 |
| CDY18346 | Canola | plasma membrane | 21.69 | 20.07 |
| CDY53556 | Canola | nucleus | 20.94 | 20.0 |
| CDY55061 | Canola | mitochondrion, nucleus | 16.98 | 18.41 |
| CDY31597 | Canola | mitochondrion | 14.37 | 18.24 |
| CDY33614 | Canola | mitochondrion, nucleus | 16.36 | 17.14 |
| CDY24501 | Canola | mitochondrion, nucleus | 16.98 | 16.93 |
| CDY27130 | Canola | cytosol, mitochondrion | 7.06 | 14.5 |
| Zm00001d035757_P003 | Maize | plasma membrane | 22.43 | 10.75 |
| CDY34742 | Canola | cytosol | 13.38 | 9.62 |
| CDX76779 | Canola | cytosol | 13.26 | 9.58 |
| CDY32721 | Canola | cytosol | 14.75 | 9.57 |
| CDY40774 | Canola | cytosol | 10.9 | 9.45 |
| CDY02799 | Canola | cytosol | 14.62 | 9.43 |
| CDX99025 | Canola | cytosol | 13.26 | 9.18 |
| CDY49153 | Canola | cytosol | 11.9 | 9.16 |
| CDX69994 | Canola | plastid | 13.38 | 9.1 |
| CDY12361 | Canola | cytosol | 12.64 | 9.09 |
| CDY62689 | Canola | cytosol | 14.37 | 8.98 |
| CDY43877 | Canola | cytosol | 14.0 | 8.57 |
| CDY14029 | Canola | cytosol | 12.64 | 8.29 |
| CDY12294 | Canola | cytosol | 12.52 | 8.29 |
| CDX69993 | Canola | cytosol | 11.03 | 7.34 |
| CDX99026 | Canola | cytosol | 11.4 | 7.24 |
| CDX81069 | Canola | nucleus | 12.76 | 7.09 |
| CDX78309 | Canola | nucleus | 13.14 | 7.08 |
| CDY02798 | Canola | cytosol | 3.84 | 6.33 |
| CDX69992 | Canola | cytosol | 4.09 | 4.36 |
| CDX99027 | Canola | nucleus | 2.73 | 2.55 |
| CDX99029 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86310 | EnsemblPlantsGene:GSBRNA2T00144429001 | Gene3D:1.20.58.2220 | GO:A0A078DAN7 | InterPro:FH2_Formin | InterPro:IPR015425 |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDX86310 | ProteinID:CDX86310.1 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 | SUPFAM:SSF101447 | TMHMM:TMhelix | UniParc:UPI0004EDB041 |
| MapMan:20.2.2.6.1 | : | : | : | : | : |
Description
BnaA06g30270D
Coordinates
chrLK031845:-:883292..886151
Molecular Weight (calculated)
88354.3 Da
IEP (calculated)
5.902
GRAVY (calculated)
-0.263
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTFCFSFLL LLSCAPSPLS YASSALNLGR RHLSDDAGSA LLTPASPTSP PFFPLESSAP PLPPPPSPPT FAAFPTTFPA NISALVLPRS PKPHSTSPAI
101: LVPAISAVLV VAAVLGVALF LYGRWKGQNR HFKDTNTTLG GGSSSSSHTS EERHVITNNF SVSASSPTSE VLYLGGEEEP DRVVTSFVKP PESPEIRPLP
201: PLPRSFQPSY EAEIHSERNE EEEDEEEEEE FFSPLASLAS SANSSPSRSG FEQSSCSSSS SGWVSPARSF SMTLSPVQQQ RSFSRLSDVS LEQSLQSLSP
301: ERLRVRNNNG HVSSSLRMFS FFNQNLSFPR ISSASTSPDR GGFVRTPLSS LYSSVSNSPD GLFRKFINSS PPIWNDFSRN VKSVLLSSES VSSRRDFVIN
401: IGGQAGAVAA PPPTRPPPLV PPSQSFVVQN DVKKPSFSDK LNQGSCQNTA WDCLKANSFK LNKEIVETLF ISNSSSPNLN QRGLTYDLPT QNEVSYQNIA
501: TRLQLLNLTT KDVCNALLEG DSGALGAELL DCLSRLAPSK EEERKLRNAS DDSVIIKLTP AERFLKELLQ VPFVFKRVDA LLSVANFYPE VEYLRRSFGV
601: VQAACEELRN NKTFSRLLEA ILKTGNKMSV GTNSHAFKFD TLLKLAEVKG LDGRSSVLHF AVQEMIKSEG SVKALDRIRN LSSEMETVKK SADIEYGVLT
701: NGVLKLYQGI RSIKELLILS EESGCSGDQW MKFEAKMGRF LETAGEEIVR IKAQESSTLS ALEEVTELFH VGSFKEEGHT LRVFMAVRDF LSTLDEVCND
801: MGERFSA
101: LVPAISAVLV VAAVLGVALF LYGRWKGQNR HFKDTNTTLG GGSSSSSHTS EERHVITNNF SVSASSPTSE VLYLGGEEEP DRVVTSFVKP PESPEIRPLP
201: PLPRSFQPSY EAEIHSERNE EEEDEEEEEE FFSPLASLAS SANSSPSRSG FEQSSCSSSS SGWVSPARSF SMTLSPVQQQ RSFSRLSDVS LEQSLQSLSP
301: ERLRVRNNNG HVSSSLRMFS FFNQNLSFPR ISSASTSPDR GGFVRTPLSS LYSSVSNSPD GLFRKFINSS PPIWNDFSRN VKSVLLSSES VSSRRDFVIN
401: IGGQAGAVAA PPPTRPPPLV PPSQSFVVQN DVKKPSFSDK LNQGSCQNTA WDCLKANSFK LNKEIVETLF ISNSSSPNLN QRGLTYDLPT QNEVSYQNIA
501: TRLQLLNLTT KDVCNALLEG DSGALGAELL DCLSRLAPSK EEERKLRNAS DDSVIIKLTP AERFLKELLQ VPFVFKRVDA LLSVANFYPE VEYLRRSFGV
601: VQAACEELRN NKTFSRLLEA ILKTGNKMSV GTNSHAFKFD TLLKLAEVKG LDGRSSVLHF AVQEMIKSEG SVKALDRIRN LSSEMETVKK SADIEYGVLT
701: NGVLKLYQGI RSIKELLILS EESGCSGDQW MKFEAKMGRF LETAGEEIVR IKAQESSTLS ALEEVTELFH VGSFKEEGHT LRVFMAVRDF LSTLDEVCND
801: MGERFSA
001: MQNFWFAIFF FLLTCAPPSP LSYASTVTLS RRLLYDYESP LPLPLSPISP PFFPLESSPP SPPPPLPPTP PTTFAVFPTF PANISALVLP RSSKPHHTSP
101: TLLLPALSAV LVIATVIGLA LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI RTGGTFFLKQ DSPEIRPLPP
201: LPPRSFHHNN YETEVNEEDE EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP SPERLRVRKN YNGNGSSSLR
301: MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP
401: TRPPPLVPPS QPFVVQNDVK KQSFSDQPPK QLHWERLRSS SSKLSKEMVE TMFIANSSNP RDLPIQNQVL DPRKAQNIAT LLQLLNLSTK DVCQALLDGD
501: CDVLGAELLE CLSRLAPSKE EERKLKSFSD GSEIGPAERF LKELLHVPFV FKRVDALLFV ANFHSEIKRL RKSFSVVQVA CEELRNSRMF SILLEAILKT
601: GNMMSVRTNR CGDADAFKLD TLLKLVDVKG LDGRSSLLHF VVQEMMKSEG SVRALEGIRN LNTELSNVKK SADIEYGVLR SNVSRICQGL KNIEALLLLS
701: EESGSYGDQW LKFKERMTRF LKTAAEEIVK IKIRESSTLS ALEEVTEQFH GDASKEGHTM RIFMIVRDFL SVLDQVCKEM GD
101: TLLLPALSAV LVIATVIGLA LFLYGRHRGQ TRHLKNSHCS SSNTSSYGDE QSHITTNFNM AATTSPSEVF YLNTEESDHI RTGGTFFLKQ DSPEIRPLPP
201: LPPRSFHHNN YETEVNEEDE EEEEDVFFSP MASLPGSANS SPSHSCSSSC SGWVSPARSF SITMSPPNPR YSDATNLQSP SPERLRVRKN YNGNGSSSLR
301: MFSFWNQNMG FGFPRISSAS TSPDRGFIRT PLSSLYSSVS TSPDGLFRKF LDSSPPIWND FSRNVKSVLL SHTASSRRDF VINIGESSSQ QSKVPALPPP
401: TRPPPLVPPS QPFVVQNDVK KQSFSDQPPK QLHWERLRSS SSKLSKEMVE TMFIANSSNP RDLPIQNQVL DPRKAQNIAT LLQLLNLSTK DVCQALLDGD
501: CDVLGAELLE CLSRLAPSKE EERKLKSFSD GSEIGPAERF LKELLHVPFV FKRVDALLFV ANFHSEIKRL RKSFSVVQVA CEELRNSRMF SILLEAILKT
601: GNMMSVRTNR CGDADAFKLD TLLKLVDVKG LDGRSSLLHF VVQEMMKSEG SVRALEGIRN LNTELSNVKK SADIEYGVLR SNVSRICQGL KNIEALLLLS
701: EESGSYGDQW LKFKERMTRF LKTAAEEIVK IKIRESSTLS ALEEVTEQFH GDASKEGHTM RIFMIVRDFL SVLDQVCKEM GD
Arabidopsis Description
FH9Formin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX37]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.