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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042506_P002 Maize extracellular, plasma membrane 93.94 92.36
Os01t0897700-01 Rice cytosol 23.83 91.8
Zm00001d012158_P001 Maize extracellular, plasma membrane 92.55 91.48
HORVU3Hr1G089510.1 Barley plasma membrane 80.74 79.81
TraesCS3B01G429900.1 Wheat plasma membrane 80.85 79.66
TraesCS3A01G397900.1 Wheat plasma membrane 80.21 79.45
TraesCS3D01G391800.1 Wheat mitochondrion 76.17 75.21
PGSC0003DMT400056393 Potato cytosol 33.3 65.21
GSMUA_Achr5P25760_001 Banana mitochondrion 29.26 62.64
VIT_00s0227g00200.t01 Wine grape cytosol 10.11 62.09
AT3G25493.1 Thale cress vacuole 8.83 51.88
VIT_05s0094g00920.t01 Wine grape nucleus 50.43 50.97
KRH47952 Soybean cytosol 40.85 49.48
Bra029655.1-P Field mustard cytosol 15.64 48.51
PGSC0003DMT400013717 Potato plastid 43.4 47.39
KRH71295 Soybean vacuole 43.62 46.59
Solyc06g082910.2.1 Tomato extracellular 46.17 46.37
Solyc12g019480.1.1 Tomato nucleus 43.62 46.17
Bra012246.1-P Field mustard cytosol 9.57 45.92
Solyc09g042740.2.1 Tomato endoplasmic reticulum, vacuole 44.15 45.65
KRH50174 Soybean vacuole 43.51 45.65
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 45.74 45.55
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 36.49 45.43
Solyc08g014430.2.1 Tomato nucleus 36.28 45.05
Bra001256.1-P Field mustard plastid 17.98 44.36
CDX79799 Canola mitochondrion, plastid, vacuole 36.49 43.2
CDX83457 Canola golgi, plasma membrane, vacuole 38.19 42.59
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 38.62 42.36
KRH06515 Soybean endoplasmic reticulum, plastid, vacuole 48.62 42.35
CDY17909 Canola golgi, vacuole 38.09 42.22
CDY44259 Canola plasma membrane, vacuole 37.34 41.64
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 38.94 40.94
AT3G25500.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 45.74 40.91
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 36.91 40.82
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 46.6 40.71
KRH00989 Soybean extracellular, golgi, vacuole 44.79 40.52
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 45.43 40.32
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 46.7 40.24
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 38.3 40.22
EER97466 Sorghum plasma membrane 33.72 39.92
KRH40232 Soybean endoplasmic reticulum, extracellular 44.04 39.92
KXG39923 Sorghum mitochondrion 39.47 39.43
KXG38231 Sorghum plastid 37.23 38.8
AT5G48360.1 Thale cress extracellular, vacuole 29.15 35.04
CDY35941 Canola plastid 27.66 34.71
CDX74041 Canola golgi, plasma membrane, plastid 25.64 33.8
CDY28040 Canola plastid 27.55 33.64
CDX86310 Canola endoplasmic reticulum, plasma membrane 28.83 33.58
CDX85333 Canola plasma membrane 29.36 33.54
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 28.72 33.46
CDY07990 Canola golgi, plasma membrane, plastid 25.43 33.1
AT3G07540.1 Thale cress plasma membrane 27.55 30.8
EES12298 Sorghum plasma membrane 27.34 30.16
EES17525 Sorghum endoplasmic reticulum, plasma membrane 25.11 28.82
EER99497 Sorghum endoplasmic reticulum, plasma membrane, vacuole 26.28 27.23
EES13879 Sorghum golgi 25.85 26.76
EES04559 Sorghum plasma membrane 24.04 26.46
EES05554 Sorghum plasma membrane 25.32 25.87
KXG39193 Sorghum plastid 22.55 24.88
EES10325 Sorghum golgi 25.32 24.69
KXG25260 Sorghum cytosol 16.06 12.48
OQU80260 Sorghum cytosol 12.87 10.67
KXG31267 Sorghum cytosol 16.28 10.26
OQU90190 Sorghum cytosol 16.28 9.32
KXG23793 Sorghum cytosol 17.23 8.04
EER87977 Sorghum cytosol 2.87 5.03
Protein Annotations
Gene3D:1.20.58.2220MapMan:20.2.2.6.1EntrezGene:8078678UniProt:C5XFD3ProteinID:EES04039.1InterPro:FH2_Formin
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0003899GO:GO:0005488
GO:GO:0005575GO:GO:0006139GO:GO:0006351GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:IPR015425EnsemblPlants:OQU88036
ProteinID:OQU88036ProteinID:OQU88036.1PFAM:PF02181PRINTS:PR01217PFscan:PS51444PANTHER:PTHR23213
PANTHER:PTHR23213:SF276SMART:SM00498EnsemblPlantsGene:SORBI_3003G389100SUPFAM:SSF101447unigene:Sbi.20999SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A85450RefSeq:XP_002458919.1SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:70006219..70011975
Molecular Weight (calculated)
100864.0 Da
IEP (calculated)
8.526
GRAVY (calculated)
-0.441
Length
940 amino acids
Sequence
(BLAST)
001: MPSPRQFLQL LLPILLATCC VDGGNGPDDA LATARRQLHQ PFFVPDQPGQ PSAPPPFFPA MPVTPPPPMP TGQNQPTYPA LVLPNTGSSG ATPPAGSSHG
101: SKKASKLVPA ILLPLLTVAV LGLSVAFFFS HRRSNAARGG GGGCVGGGDA KFLHPERTSL FARDEFGGSG GGGGGGAAPA PATSAEFLYV GTLASRADER
201: SSDTTSSGDE ESRSSGGSPE LRPLPPLARQ CAPAPSRSPG GGSPSSGEEE FYSPRGSSTK TTSSSRRTLA TAVQAALEAR DRSRTPSPGS VLSTPSYPSS
301: PGATLSPAPA SPPAFSSPGE SGRRSVKSRS ESARVVVLPP VPPTPPPPPP FAPTLPPPPP PRRKPPSPSP PCSPLNDKSA LRSSTDTIEI NPFVQPPSLP
401: TSTHPPRPPP AAGPPPPPPP PPPPPVGYWE SRVRKPDTSK ETRSPALSPP PQAANFRSVP APTDAFPSRL PESSDQGDKS EDTTPRPKLK PLHWDKVRAS
501: SDRVMVWDQL KSSSFQVNEE MIETLFICNP ANAPAKEATR RPVLPTPKAE NKVLDPKKAQ NIAILLRALN VTKEEVCDAL CEGNTENFGA ELLETLLKMA
601: PTKEEEIKLR EFKEETSPIK LNPAEKFLKA VLDVPFAFKR VDAMLYIANF ESEVNYLKKS FETLESACDE LRSSRLFLKL LEAVLKTGNR MNVGTNRGDA
701: HAFKLDTLLK LVDVKGTDGH TTLLHFVVQE IIRTEGSRLS ASTQTTPRTQ ANPLREELEC KKLGLQVVAG LANELSNVKK AAAMDSDVLS SYVTKLAGGI
801: DKITEVLRLN EELKSRDDAW QFHDRMQKFL KKADDEIIRV QCQESVALSL VKEITEYFHG DSAKEEAHPF RIFMVVRDFL TVLDQVCKEV GRINDRTIAS
901: SVRHFPVPVN PMMPQLFPRL HALRAGFSDD ESSAASVSSP
Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.