CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83457	Canola	golgi, plasma membrane, vacuole	92.05	92.05
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	94.19	88.72
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	77.11	72.71
CDY17909	Canola	golgi, vacuole	71.77	71.34
CDX79799	Canola	mitochondrion, plastid, vacuole	66.43	70.53
GSMUA_Achr11P...	Banana	mitochondrion, plastid	28.35	55.58
GSMUA_Achr5P25760_001	Banana	mitochondrion	27.05	51.94
GSMUA_Achr6P18370_001	Banana	nucleus	34.4	51.51
Os01t0897700-01	Rice	cytosol	14.35	49.59
CDX94358	Canola	mitochondrion, plastid	8.3	44.87
VIT_05s0094g00920.t01	Wine grape	nucleus	49.47	44.84
PGSC0003DMT400013717	Potato	plastid	45.2	44.25
Solyc12g019480.1.1	Tomato	nucleus	46.26	43.92
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	38.91	43.44
KRH71295	Soybean	vacuole	45.31	43.41
Solyc08g014430.2.1	Tomato	nucleus	38.32	42.67
KRH50174	Soybean	vacuole	45.08	42.41
GSMUA_Achr10P...	Banana	plastid	39.98	41.97
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	33.21	41.73
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	35.35	41.22
CDY37849	Canola	endoplasmic reticulum	25.62	41.14
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	36.3	38.88
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	36.3	38.83
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	38.55	38.74
Zm00001d021173_P001	Maize	plasma membrane	34.88	38.58
TraesCS5A01G304700.1	Wheat	golgi	35.94	38.5
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	35.71	38.3
CDY08720	Canola	mitochondrion	32.74	37.96
OQU88036	Sorghum	extracellular, plasma membrane	41.64	37.34
Zm00001d012158_P001	Maize	extracellular, plasma membrane	41.99	37.22
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.26	36.83
Zm00001d042506_P002	Maize	extracellular, plasma membrane	41.76	36.82
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	46.74	36.62
CDY43578	Canola	endoplasmic reticulum, extracellular	36.18	36.31
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	36.54	36.24
TraesCS3A01G397900.1	Wheat	plasma membrane	40.57	36.04
TraesCS3B01G429900.1	Wheat	plasma membrane	40.57	35.85
TraesCS3D01G391800.1	Wheat	mitochondrion	40.33	35.71
HORVU3Hr1G089510.1	Barley	plasma membrane	40.21	35.65
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	35.47	35.51
CDY36494	Canola	endoplasmic reticulum, vacuole	37.96	35.48
TraesCS1D01G010200.1	Wheat	plastid	23.61	35.04
TraesCS1B01G059400.1	Wheat	plastid	23.13	34.64
TraesCS1A01G011800.1	Wheat	extracellular	21.0	33.21
CDY70125	Canola	cytosol	18.74	32.92
HORVU1Hr1G002300.8	Barley	plastid	27.16	31.63
CDY05170	Canola	extracellular, golgi, plasma membrane	27.64	31.28
CDY35941	Canola	plastid	27.64	31.11
CDX74041	Canola	golgi, plasma membrane, plastid	26.22	31.0
CDY27766	Canola	golgi, plasma membrane, vacuole	28.94	30.65
CDY07990	Canola	golgi, plasma membrane, plastid	26.22	30.61
CDY28040	Canola	plastid	27.64	30.26
CDY22934	Canola	nucleus, plastid	25.98	30.04
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	29.06	29.52
CDX74146	Canola	extracellular, golgi, plasma membrane	28.0	29.39
CDX86310	Canola	endoplasmic reticulum, plasma membrane	28.11	29.37
CDX85333	Canola	plasma membrane	28.35	29.04
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.11	29.01
GSMUA_Achr7P23740_001	Banana	plastid	40.57	28.52
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	26.81	28.36
CDY42470	Canola	plasma membrane	28.83	28.29
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	26.69	28.16
CDY43811	Canola	golgi	28.47	28.14
CDY43029	Canola	plasma membrane	28.71	28.04
CDY18346	Canola	plasma membrane	28.94	27.98
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.74	27.96
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	26.57	27.35
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	27.16	27.29
CDY53556	Canola	nucleus	26.69	26.63
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	19.57	26.27
CDY31597	Canola	mitochondrion	19.81	26.26
CDY16239	Canola	vacuole	21.83	26.21
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	24.56	26.14
CDY55061	Canola	mitochondrion, nucleus	22.66	25.67
CDY33614	Canola	mitochondrion, nucleus	22.3	24.42
CDY24501	Canola	mitochondrion, nucleus	22.66	23.61
CDY27130	Canola	cytosol, mitochondrion	8.78	18.83
Zm00001d035757_P003	Maize	plasma membrane	26.93	13.49
CDY40774	Canola	cytosol	14.83	13.43
CDX99025	Canola	cytosol	17.79	12.86
CDX76779	Canola	cytosol	16.96	12.8
CDY12361	Canola	cytosol	16.96	12.75
CDY34742	Canola	cytosol	16.73	12.56
CDY14029	Canola	cytosol	18.27	12.51
CDX99029	Canola	cytosol	0.24	12.5
CDY49153	Canola	cytosol	15.42	12.4
CDX69994	Canola	plastid	17.08	12.13
CDY12294	Canola	cytosol	16.73	11.57
CDY32721	Canola	cytosol	16.25	11.01
CDY02799	Canola	cytosol	16.13	10.87
CDY62689	Canola	cytosol	16.37	10.68
CDX81069	Canola	nucleus	17.91	10.4
CDX78309	Canola	nucleus	18.27	10.29
CDX69993	Canola	cytosol	14.71	10.22
CDX99026	Canola	cytosol	14.83	9.83
CDY43877	Canola	cytosol	15.07	9.64
CDY02798	Canola	cytosol	4.15	7.14
CDX69992	Canola	cytosol	6.17	6.87
CDX99027	Canola	nucleus	4.15	4.06

Protein Annotations

EnsemblPlants:CDY44259	EnsemblPlantsGene:GSBRNA2T00079770001	Gene3D:1.20.58.2220	GO:A0A078I3X1	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181
PFscan:PS51444	ProteinID:CDY44259	ProteinID:CDY44259.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0004EDB4E3	UniProt:A0A078I3X1	MapMan:20.2.2.6.1	:

Description

BnaC03g24510DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3X1]

Coordinates

chrLK032583:+:231497..234513

Molecular Weight (calculated)

92817.3 Da

IEP (calculated)

8.758

GRAVY (calculated)

-0.444

Length

843 amino acids

Sequence
(BLAST)

001: MSKIPFLLRF AMIVFFISTS YSSGNQRLNS RHLLHQPFYP IKHPAAPPPQ DKHLFSSVTP PPPPPAPHSN PFFPSNAVHP SPPPPPPASI PTFPANISSR
101: FFPPHNSSKP HNNNHHIAKL VSITVSVVSS SVLLSLLVVL IIYLRRTRRR RLLPAYNTKS TRSDSLQLFN ASPSDGARKH KQPQKHTSSN TSSDFLYLGT
201: LVNSRSEGFA PQKSPVSGNV AGVLELPPGP ASSSSSSSYS HHHKPGSPEL RPLPPLPKLQ AFSPTYLSPE HLFPKRQDFD GDDEEFFSPR GSSGRKQSPP
301: RAVEDSGVVQ SGDRSVNGSN SGFPTSFNDS PATSLKPKSL SPPLSETSSN GSVLKKTGPA RPPPPPPPPP PPQFSEIPAA TSPSPPSDPD KKDETLKPKL
401: KALHWDKVRA GSSRVMVWDQ IKSNSFQVNE EMIETLFRAN DPSSRTRGVG NAGLVQSASH ENQFLDPRKS HNIEILLRAL NVTADEVCEA LVEGNADMLG
501: PELLECLLKM VPTKEEEDKL KELKEDDEST TSKIGPAEKF LRALLNIPFA FKRIDAMFYI VNFDSETEYL KRSFHTLEVA CSELRNTRMF LKLLEAVLKT
601: GNRMNIGTNR GDAHAFKLDT LLKLADIKGA DGKTTLLHFV VQEIIKSEGA RVSSTSIQSP IGDDDIAEQS AFQDDIELKK LGLQVVSGLS SQLINVKKAA
701: AMDSISLSKE IAEISSGITK VKEVIMELKQ ETGVERFLES MNSFLDKGEK VITEIQSHGI NVMKMVKEVT EYFHGNLESH PFRIFTVVRD FLTILDQVCK
801: EVGRVNERTV YGSRPSPSNQ TVTPLFPVVN INHSELSHDD DSF

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.