CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08720	Canola	mitochondrion	78.82	97.8
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	95.45	95.99
CDY43578	Canola	endoplasmic reticulum, extracellular	79.93	85.83
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	85.25	85.54
CDY37849	Canola	endoplasmic reticulum	48.34	83.05
GSMUA_Achr7P26240_001	Banana	cytosol	26.16	71.3
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	61.86	62.98
GSMUA_Achr4P07090_001	Banana	cytosol	30.49	59.78
PGSC0003DMT400055250	Potato	vacuole	57.87	58.92
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	57.43	58.27
Solyc02g092470.2.1	Tomato	nucleus	57.21	58.04
KRH28364	Soybean	vacuole	57.21	57.65
KRH04437	Soybean	plastid, vacuole	56.21	57.35
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	55.88	56.69
PGSC0003DMT400038519	Potato	endoplasmic reticulum	53.33	54.6
HORVU4Hr1G069940.1	Barley	plastid	35.03	54.58
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	52.44	54.56
Os03t0204100-01	Rice	plasma membrane	47.01	47.53
TraesCS4D01G257700.1	Wheat	plasma membrane	46.34	47.18
TraesCS4A01G047000.1	Wheat	extracellular, plasma membrane, vacuole	46.34	46.97
TraesCS4B01G257800.1	Wheat	plasma membrane	46.01	46.47
HORVU4Hr1G069930.2	Barley	golgi, mitochondrion, plasma membrane	46.12	46.38
Zm00001d028089_P001	Maize	plasma membrane	44.57	45.58
Zm00001d048142_P001	Maize	plasma membrane	42.68	44.72
Zm00001d013926_P001	Maize	extracellular, plasma membrane	40.91	44.19
KXG39923	Sorghum	mitochondrion	45.9	44.0
Zm00001d032545_P001	Maize	plasma membrane	40.35	42.37
TraesCS1A01G327400.1	Wheat	plasma membrane	37.69	42.29
HORVU1Hr1G077850.2	Barley	mitochondrion	33.48	42.24
KXG38231	Sorghum	plastid	42.13	42.13
EER97466	Sorghum	plasma membrane	36.81	41.81
Zm00001d021985_P001	Maize	plasma membrane	36.59	41.61
Os07t0588200-01	Rice	golgi, plasma membrane, vacuole	35.48	41.34
TraesCS2B01G213200.1	Wheat	plasma membrane	35.7	41.12
CDX94358	Canola	mitochondrion, plastid	7.1	41.03
TraesCS2A01G193700.1	Wheat	golgi	35.48	40.76
Os10t0347800-00	Rice	cytosol, nucleus, plastid	38.25	40.35
HORVU2Hr1G035230.1	Barley	golgi, plasma membrane, plastid	35.14	40.28
TraesCS1B01G340800.1	Wheat	mitochondrion	37.14	40.17
CDY17909	Canola	golgi, vacuole	37.36	39.74
TraesCS1D01G329400.1	Wheat	plastid	36.7	39.69
CDX79799	Canola	mitochondrion, plastid, vacuole	34.81	39.55
CDX83457	Canola	golgi, plasma membrane, vacuole	35.59	38.08
CDY44259	Canola	plasma membrane, vacuole	35.48	37.96
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.02	34.94
CDY05170	Canola	extracellular, golgi, plasma membrane	28.71	34.77
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.13	34.48
CDY70125	Canola	cytosol	18.29	34.38
CDY27766	Canola	golgi, plasma membrane, vacuole	29.93	33.92
CDY07990	Canola	golgi, plasma membrane, plastid	26.5	33.1
CDX74041	Canola	golgi, plasma membrane, plastid	26.05	32.96
CDY35941	Canola	plastid	27.27	32.84
CDY28040	Canola	plastid	27.72	32.47
CDY22934	Canola	nucleus, plastid	25.61	31.69
CDX85333	Canola	plasma membrane	28.82	31.59
CDX74146	Canola	extracellular, golgi, plasma membrane	28.05	31.51
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	27.83	31.49
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.49	31.46
CDX86310	Canola	endoplasmic reticulum, plasma membrane	27.83	31.1
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	27.38	30.91
CDY43811	Canola	golgi	29.05	30.72
CDY43029	Canola	plasma membrane	29.27	30.59
CDY42470	Canola	plasma membrane	28.94	30.38
CDY18346	Canola	plasma membrane	29.16	30.16
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.83	30.03
CDY53556	Canola	nucleus	26.83	28.64
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	19.51	28.03
CDY16239	Canola	vacuole	21.4	27.49
CDY31597	Canola	mitochondrion	19.07	27.04
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	23.61	26.89
CDY55061	Canola	mitochondrion, nucleus	22.06	26.75
CDY33614	Canola	mitochondrion, nucleus	21.29	24.94
CDY24501	Canola	mitochondrion, nucleus	21.95	24.47
CDY27130	Canola	cytosol, mitochondrion	8.2	18.83
CDY12361	Canola	cytosol	18.63	14.97
CDY49153	Canola	cytosol	16.63	14.31
CDY34742	Canola	cytosol	17.52	14.07
CDX76779	Canola	cytosol	17.41	14.06
CDX99025	Canola	cytosol	17.96	13.89
CDY14029	Canola	cytosol	18.85	13.81
CDY12294	Canola	cytosol	18.4	13.62
CDY40774	Canola	cytosol	13.97	13.53
CDX69994	Canola	plastid	17.18	13.06
CDY02799	Canola	cytosol	18.07	13.03
CDY32721	Canola	cytosol	17.74	12.86
CDY62689	Canola	cytosol	18.18	12.69
CDX99029	Canola	cytosol	0.22	12.5
CDX78309	Canola	nucleus	19.18	11.56
CDX81069	Canola	nucleus	18.4	11.43
CDX69993	Canola	cytosol	15.3	11.38
CDY43877	Canola	cytosol	16.52	11.3
CDX99026	Canola	cytosol	15.52	11.01
CDX69992	Canola	cytosol	8.2	9.78
CDY02798	Canola	cytosol	4.66	8.57
CDX99027	Canola	nucleus	4.32	4.52

Protein Annotations

EnsemblPlants:CDY36494	EnsemblPlantsGene:GSBRNA2T00062163001	Gene3D:1.20.58.2220	GO:A0A078HGG1	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181
PFscan:PS51444	ProteinID:CDY36494	ProteinID:CDY36494.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00498
SUPFAM:SSF101447	TMHMM:TMhelix	UniParc:UPI0004EEA38A	UniProt:A0A078HGG1	MapMan:20.2.2.6.1	:

Description

BnaC03g48530DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGG1]

Coordinates

chrLK032377:+:266596..270668

Molecular Weight (calculated)

99196.5 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.608

Length

902 amino acids

Sequence
(BLAST)

001: MSFLHSRFFF FFSLLFSSFS VSLSSSSFSV GEANEIHRRI LHQPLFPDAS PPPPPDLEST PPPPDAPDQP FFPENPSTPD QTQFPPPPPP PASSDANGGL
101: PIPTATTQQA KPGKKFAIVI SVGVVTLGML SALAFFLYRH KVKHASDTQK LVSRGGDGGS RRFQEDPLPP TSSTFLYMGT VEPSREPASE SIGPSIGPVN
201: TSPYRKLNSA KRSDRYRPSP ELQPLPPLAK PPQPSENSPS ALSPSTSSSD EECRDTAFYT PHGSAISSDD GYYTAFPRSA NSNGHSSGSV PHSKRTSPKS
301: KFGSRSPEMK HVIIPSIKQK PPPVQPPPFR SLEADELEIP YPQNKPKFSQ PPTPPNRAAF QAITQDKSPL STRVSPRRSP PPLHTPPPPP PPPPPPRPPP
401: PPQIRPRDFQ IPRKLSNPEA TKPDDQSRKL AFKTPSPQSK AVEEAKSVSA DGDTDPSRPK LKPLHWDKVR ASSDRATVWD QLKSSSFQVN EDRMEHLFGC
501: SSASSAPKEP VRRSVMPPAE NENRVLDPKK SQNIAILLRA LNVTREEVSE ALLDGNPESL GAELLETLVK MAPTKEEEIK LREYSGDVSK LGTAERFLKT
601: ILDIPFAFKR VEAMLYRASF DAEVKYLRNS FQTLEDASLE LKASRLFLKL LEAVLMTGNR MNVGTNRGEA KAFKLDTLLK LVDIKGVDGK TTLLHFVVQE
701: ITKSEATTTT VDETIVHENK DGFRKQGLQV VAGLSRDLAN VKKSAGMDSD VLSGYVTKLE TGLEKLRAFV KTEITTTTTP GKFFDSMKTF LKEAEEEIRK
801: IKGGERKALS MVKEVTEYFH GDAAKEEAHP LRIFMVVRDF LGVLDNVCKE VKTMQEMSSA MGSASARSFR ISATASLPVL HRYKSRQEDT SSDNEHSSNS
901: ST

Best Arabidopsis Sequence Match ( AT5G67470.1 )
(BLAST)

001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST

Arabidopsis Description

FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.