Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G047000.1 | Wheat | extracellular, plasma membrane, vacuole | 98.42 | 97.98 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 98.53 | 97.76 |
| HORVU4Hr1G069940.1 | Barley | plastid | 63.43 | 97.06 |
| HORVU4Hr1G069930.2 | Barley | golgi, mitochondrion, plasma membrane | 97.4 | 96.21 |
| Os03t0204100-01 | Rice | plasma membrane | 81.26 | 80.72 |
| GSMUA_Achr7P26240_001 | Banana | cytosol | 28.67 | 76.74 |
| Zm00001d048142_P001 | Maize | plasma membrane | 73.93 | 76.07 |
| Zm00001d028089_P001 | Maize | plasma membrane | 75.17 | 75.51 |
| KXG39923 | Sorghum | mitochondrion | 78.78 | 74.18 |
| GSMUA_Achr4P07090_001 | Banana | cytosol | 33.07 | 63.7 |
| CDY37849 | Canola | endoplasmic reticulum | 33.75 | 56.95 |
| TraesCS1D01G329400.1 | Wheat | plastid | 51.13 | 54.32 |
| CDY08720 | Canola | mitochondrion | 41.76 | 50.89 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 49.55 | 49.55 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 46.05 | 48.57 |
| PGSC0003DMT400055250 | Potato | vacuole | 46.84 | 46.84 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.4 | 46.72 |
| Solyc02g092470.2.1 | Tomato | nucleus | 46.84 | 46.68 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 47.18 | 46.34 |
| Bra024447.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.84 | 46.27 |
| KRH04437 | Soybean | plastid, vacuole | 45.49 | 45.59 |
| KRH58088 | Soybean | endoplasmic reticulum, golgi, vacuole | 45.26 | 45.11 |
| Solyc03g044060.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 44.02 | 44.98 |
| KRH77115 | Soybean | endoplasmic reticulum, golgi, vacuole | 44.92 | 44.77 |
| KRH28364 | Soybean | vacuole | 45.15 | 44.69 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 44.02 | 44.27 |
| Bra031838.1-P | Field mustard | cytosol | 20.2 | 40.68 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 35.89 | 40.46 |
| TraesCS1D01G010200.1 | Wheat | plastid | 23.48 | 36.62 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 39.28 | 36.55 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 28.89 | 30.4 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 25.73 | 26.82 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 25.96 | 25.53 |
| TraesCS5D01G089100.1 | Wheat | cytosol | 8.8 | 25.49 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 26.86 | 24.87 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 26.52 | 22.9 |
| TraesCS2D01G386600.1 | Wheat | cytosol | 9.82 | 22.66 |
| TraesCS2D01G190800.1 | Wheat | cytosol | 9.03 | 19.61 |
| TraesCS1D01G077900.1 | Wheat | cytosol | 18.74 | 11.85 |
| TraesCS6D01G339300.1 | Wheat | cytosol | 16.59 | 11.01 |
| TraesCS4D01G237900.1 | Wheat | plastid | 8.47 | 8.28 |
| TraesCS2D01G386500.1 | Wheat | cytosol | 3.39 | 6.19 |
| TraesCS2D01G190700.1 | Wheat | cytosol | 1.69 | 4.23 |
| TraesCS7D01G150000.1 | Wheat | mitochondrion | 2.14 | 3.25 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G257700.1 | EnsemblPlantsGene:TraesCS4D01G257700 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF261 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00498 |
| SUPFAM:SSF101447 | TMHMM:TMhelix | MapMan:20.2.2.6.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:427460843..427464608
Molecular Weight (calculated)
94827.0 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.471
Length
886 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPAIALLLA QLVLCGCVSP AVSADAVVPR RVLHQPLFPI EWTPPPSPPP PPAPDFTSDP SPPVATPDAP PGDFFPPAPP VSSDGGGGSG GGTASSPPNT
101: VTADVSTPPS PTAAGHGPKK ATIVAAGAAA AAGVALLGFA CAFLITGRAR RRCDSQKLLG PDGGPALRRT APSATDFLYV GTVEPTTPAH QRGPTTADLA
201: GSPYRKLRNE RARRAVCRDE ATDHPSPELR PLPPLRRATT MGSSDEDAYY TPRQRSGGSG SGAGGGAGSG VYGETWSEAS ASSPPTTTTA SRRSLPSMTS
301: DFFPPVAAIA ALPPPPRSRR TRTPPRTRFS TGSTPDVKQA ISPSPRPVQP SNPPPRPPPP PPPPPPPPPT APPKSNAAPR PPPPPPPPPM ASTNSLPPKT
401: GEPTSRRRLL KPLPPEGPRI AMPMPITAAA AAENNGSTSM RAEDDAAGGL PKLKPLHWDK VRASSDRAMV WDQLKSSSFQ LDEDMIEALF MNNSMPAAPP
501: RDAGRKPAVP PFRQEERVLD PKKAQNIAIL LRALNVTREE VSDALLDGNA ECLGSELLET LVKMAPTKEE EVKLRDYSGD LAKLGTAERF LKTVLDIPFA
601: FKRVDAMLYR ANFETEINYL RKSFETLEAA CEDLRGSRLF LKLLEAVLRT GNRMNVGTNR GEAKAFKLDT LLKLADVKGA DGKTTLLHFV VQEMIRSEDA
701: KSEKENTTAT SSKDKGLKVV CGLSSELGNV KKAASMDFDV LHGYVSKLET GLEKIKSVLQ LERQCTQGQR FFTAMQGFLK EADKEIEIVR GEEKRALGRV
801: KDITDYFHGD AAKEEAHPLR IFMVVRDFLS MLDHVCREVG RMQQDRTVVG SARSFRVSTT APLPVLSLYG QRRQNNSDDD DDSMSS
101: VTADVSTPPS PTAAGHGPKK ATIVAAGAAA AAGVALLGFA CAFLITGRAR RRCDSQKLLG PDGGPALRRT APSATDFLYV GTVEPTTPAH QRGPTTADLA
201: GSPYRKLRNE RARRAVCRDE ATDHPSPELR PLPPLRRATT MGSSDEDAYY TPRQRSGGSG SGAGGGAGSG VYGETWSEAS ASSPPTTTTA SRRSLPSMTS
301: DFFPPVAAIA ALPPPPRSRR TRTPPRTRFS TGSTPDVKQA ISPSPRPVQP SNPPPRPPPP PPPPPPPPPT APPKSNAAPR PPPPPPPPPM ASTNSLPPKT
401: GEPTSRRRLL KPLPPEGPRI AMPMPITAAA AAENNGSTSM RAEDDAAGGL PKLKPLHWDK VRASSDRAMV WDQLKSSSFQ LDEDMIEALF MNNSMPAAPP
501: RDAGRKPAVP PFRQEERVLD PKKAQNIAIL LRALNVTREE VSDALLDGNA ECLGSELLET LVKMAPTKEE EVKLRDYSGD LAKLGTAERF LKTVLDIPFA
601: FKRVDAMLYR ANFETEINYL RKSFETLEAA CEDLRGSRLF LKLLEAVLRT GNRMNVGTNR GEAKAFKLDT LLKLADVKGA DGKTTLLHFV VQEMIRSEDA
701: KSEKENTTAT SSKDKGLKVV CGLSSELGNV KKAASMDFDV LHGYVSKLET GLEKIKSVLQ LERQCTQGQR FFTAMQGFLK EADKEIEIVR GEEKRALGRV
801: KDITDYFHGD AAKEEAHPLR IFMVVRDFLS MLDHVCREVG RMQQDRTVVG SARSFRVSTT APLPVLSLYG QRRQNNSDDD DDSMSS
001: MKALQSRFFF FFFFYIFFSV SVSSEAHRRI LHQPLFPESS TPPPPDFQST PSPPLPDTPD QPFFPENPST PQQTLFPPPP PPVSADVNGG LPIPTATTQS
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
101: AKPGKKVAIV ISVGIVTLGM LSALAFFLYR HKAKHASDTQ KLVTGGGDGG GSRRFQEDSG PPTTTSSTFL YMGTVEPTRV SASESNGGTN GPVNSSPYRK
201: LNSAKRSERY RPSPELQPLP PLAKPPQPSD NSPSALSPSS SSSGEECRDT AFYTPHGSAI SSDDGYYTAF PRSANGSLPH SKRTSPRSKF GSAPTTAASR
301: SPEMKHVIIP SIKQKLPPPV QPPPLRGLES DEQELPYSQN KPKFSQPPPP PNRAAFQAIT QEKSPVPPPR RSPPPLQTPP PPPPPPPLAP PPPPQKRPRD
401: FQMLRKVTNS EATTNSTTSP SRKQAFKTPS PKTKAVEEVN SVSAGSLEKS GDGDTDPSKP KLKPLHWDKV RASSDRATVW DQLKSSSFQL NEDRMEHLFG
501: CNSGSSAPKE PVRRSVIPLA ENENRVLDPK KSQNIAILLR ALNVTREEVS EALTDGNPES LGAELLETLV KMAPTKEEEI KLREYSGDVS KLGTAERFLK
601: TILDIPFAFK RVEAMLYRAN FDAEVKYLRN SFQTLEEASL ELKASRLFLK LLEAVLMTGN RMNVGTNRGD AIAFKLDTLL KLVDIKGVDG KTTLLHFVVQ
701: EITRSEGTTT TKDETILHGN NDGFRKQGLQ VVAGLSRDLV NVKKSAGMDF DVLSSYVTKL EMGLDKLRSF LKTETTQGRF FDSMKTFLKE AEEEIRKIKG
801: GERKALSMVK EVTEYFHGNA AREEAHPLRI FMVVRDFLGV LDNVCKEVKT MQEMSTSMGS ASARSFRISA TASLPVLHRY KARQDDTSSD SEHSSNSST
Arabidopsis Description
FH6Formin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.