Factsheet for TraesCS1D01G329400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G340800.1	Wheat	mitochondrion	91.61	91.61
TraesCS1A01G327400.1	Wheat	plasma membrane	88.25	91.54
HORVU1Hr1G077850.2	Barley	mitochondrion	72.66	84.76
GSMUA_Achr7P26240_001	Banana	cytosol	24.94	62.84
Zm00001d013926_P001	Maize	extracellular, plasma membrane	56.95	56.89
Zm00001d032545_P001	Maize	plasma membrane	57.19	55.53
KXG38231	Sorghum	plastid	57.79	53.44
GSMUA_Achr4P07090_001	Banana	cytosol	29.02	52.61
TraesCS4D01G257700.1	Wheat	plasma membrane	54.32	51.13
Os10t0347800-00	Rice	cytosol, nucleus, plastid	50.48	49.24
CDY37849	Canola	endoplasmic reticulum	29.86	47.43
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	43.41	40.86
CDY08720	Canola	mitochondrion	35.25	40.44
CDY43578	Canola	endoplasmic reticulum, extracellular	39.33	39.05
KRH04437	Soybean	plastid, vacuole	41.25	38.91
KRH77115	Soybean	endoplasmic reticulum, golgi, vacuole	40.89	38.36
KRH28364	Soybean	vacuole	41.01	38.21
KRH58088	Soybean	endoplasmic reticulum, golgi, vacuole	40.29	37.8
Solyc02g092470.2.1	Tomato	nucleus	40.17	37.68
PGSC0003DMT400055250	Potato	vacuole	39.93	37.58
Solyc03g044060.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	38.97	37.49
PGSC0003DMT400038519	Potato	endoplasmic reticulum	39.09	37.0
CDY36494	Canola	endoplasmic reticulum, vacuole	39.69	36.7
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.09	36.34
AT5G67470.1	Thale cress	extracellular, plasma membrane, vacuole	38.85	36.04
Bra031838.1-P	Field mustard	cytosol	18.7	35.45
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	33.09	35.11
TraesCS1D01G010200.1	Wheat	plastid	21.7	31.87
TraesCS3D01G391800.1	Wheat	mitochondrion	34.05	29.83
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	24.94	24.7
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	22.54	22.12
TraesCS5D01G089100.1	Wheat	cytosol	8.03	21.9
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	23.62	21.86
TraesCS2D01G220300.1	Wheat	plasma membrane	23.02	20.06
TraesCS2D01G386600.1	Wheat	cytosol	9.11	19.79
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	22.9	18.62
TraesCS2D01G190800.1	Wheat	cytosol	8.27	16.91
TraesCS1D01G077900.1	Wheat	cytosol	15.83	9.42
TraesCS6D01G339300.1	Wheat	cytosol	13.91	8.69
TraesCS4D01G237900.1	Wheat	plastid	8.87	8.17
TraesCS2D01G386500.1	Wheat	cytosol	3.6	6.19
TraesCS2D01G190700.1	Wheat	cytosol	2.28	5.35
TraesCS7D01G150000.1	Wheat	mitochondrion	2.88	4.1

Protein Annotations

EnsemblPlants:TraesCS1D01G329400.1	EnsemblPlantsGene:TraesCS1D01G329400	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	PANTHER:PTHR23213
PANTHER:PTHR23213:SF261	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498	SUPFAM:SSF101447
TMHMM:TMhelix	MapMan:20.2.2.6.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:420596828..420601156

Molecular Weight (calculated)

89094.8 Da

IEP (calculated)

9.146

GRAVY (calculated)

-0.367

Length

834 amino acids

Sequence
(BLAST)

001: MLHSHSSPPL PGRLHKRSSS SLAGAARSSV VSPYSPMPLS LALLLTLTTL LLPAAVAAGG NVRRLLHEPL FPIEWTPPPS PPASAPPSPG FSSDPSTPAP
101: PDTVVTPAPP QPSTVPAVVS SPGGPAPRVR GGGGTPKAAI VVASAAAAAF LALFAFAAAF LLTGRVPRHP VQPRVPEHPG GHAHVFESSE PNAAVAGPST
201: ASHYRKARHE RARRGICHDV DTVPSPELRP LPPLRRESAA AAGSSEEEAP YYTPGQHSAG SGSGGAEARG TWTEASASSS SARTTTPSRR SLPSLTSDFF
301: PATPSAAAAS ASTTAPPPAP PPQRSRRTPP GTRFSAGTAN PPPPQPQAFS NPISMRQSLN PVRAEDPSIA VRAAPAMAMM KETDDGGSMR THGNDGARPR
401: LKPLHREKGV RGGSSDAPDM AWDRLKSSSF QSDEDMIEVL AMNSRDTSRK GGMSTKVRPE ERVLDPEKEQ SIAILMRALN VTPDEVSDAL LHGNGECLGA
501: EILETLVKMA PTKEEELKLR DFTGESSKLG SVECFLKAVL DIPFAFKRID AMLYRANFEN EITYLRKCFQ TIEAACDDLK GSRLFLRILE AVLRAGNRMN
601: INTNWSEPKA SKLDTLLKLA DVKGADGKTT LLHSAVQEIA RSEDEKSDEI AENHIQFRKH GLKVVSGLSS ELGSVKKAAT MDFDVLHGYV SKLETGVGKI
701: TSVILLQNQC RKGERFFAVM RGFLKEAEQG IRQVRGDERK AMERVNEITG YFHGNAAKEE AHPLRIFMVA RDFVAILDRV CREVSQQDRA FVGSARSFRA
801: SATTPSPLLS MHGQHGGDGN SDEATLLGVL DAHF

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.