Factsheet for TraesCS1D01G010200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G059400.1	Wheat	plastid	92.61	93.43
TraesCS1A01G011800.1	Wheat	extracellular	77.82	82.93
HORVU1Hr1G002300.8	Barley	plastid	92.78	72.79
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	91.37	61.86
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	75.35	51.57
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	73.77	51.16
Bra029655.1-P	Field mustard	cytosol	19.37	36.3
PGSC0003DMT400056393	Potato	cytosol	30.46	36.04
Bra012246.1-P	Field mustard	cytosol	12.32	35.71
VIT_00s0227g00200.t01	Wine grape	cytosol	9.33	34.64
Bra001256.1-P	Field mustard	plastid	21.65	32.28
AT3G25493.1	Thale cress	vacuole	7.92	28.12
KRH47952	Soybean	cytosol	36.97	27.06
PGSC0003DMT400013717	Potato	plastid	37.32	24.62
VIT_05s0094g00920.t01	Wine grape	nucleus	40.14	24.52
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	33.8	24.43
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	35.74	24.2
Zm00001d035757_P003	Maize	plasma membrane	71.48	24.12
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	32.04	24.11
Solyc08g014430.2.1	Tomato	nucleus	32.04	24.04
CDX79799	Canola	mitochondrion, plastid, vacuole	33.45	23.93
KRH71295	Soybean	vacuole	36.97	23.86
CDY44259	Canola	plasma membrane, vacuole	35.04	23.61
KRH50174	Soybean	vacuole	37.15	23.55
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	37.68	23.54
Solyc06g082910.2.1	Tomato	extracellular	38.73	23.5
CDX83457	Canola	golgi, plasma membrane, vacuole	34.86	23.49
TraesCS4D01G257700.1	Wheat	plasma membrane	36.62	23.48
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	35.39	23.45
Solyc12g019480.1.1	Tomato	nucleus	36.27	23.2
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	29.4	23.1
CDY17909	Canola	golgi, vacuole	34.33	23.0
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	38.2	22.99
TraesCS3D01G391800.1	Wheat	mitochondrion	38.38	22.9
AT5G48360.1	Thale cress	extracellular, vacuole	30.81	22.38
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	35.04	22.26
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	34.86	22.12
CDX74041	Canola	golgi, plasma membrane, plastid	27.64	22.02
TraesCS1D01G329400.1	Wheat	plastid	31.87	21.7
CDX85333	Canola	plasma membrane	31.16	21.51
CDY35941	Canola	plastid	28.35	21.5
CDY07990	Canola	golgi, plasma membrane, plastid	27.29	21.47
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	30.28	21.31
CDX86310	Canola	endoplasmic reticulum, plasma membrane	30.11	21.19
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	39.96	21.04
KRH00989	Soybean	extracellular, golgi, vacuole	38.38	20.98
KRH40232	Soybean	endoplasmic reticulum, extracellular	38.03	20.83
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	38.73	20.77
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	38.38	20.74
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	39.08	20.63
CDY28040	Canola	plastid	27.64	20.39
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	39.08	20.35
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	29.93	20.19
AT3G07540.1	Thale cress	plasma membrane	28.87	19.5
TraesCS5D01G089100.1	Wheat	cytosol	10.04	18.63
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	26.41	17.65
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	27.11	17.09
TraesCS2D01G386600.1	Wheat	cytosol	11.27	16.67
TraesCS2D01G220300.1	Wheat	plasma membrane	27.99	16.61
TraesCS2D01G190800.1	Wheat	cytosol	11.09	15.44
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	26.23	14.52
TraesCS1D01G077900.1	Wheat	cytosol	19.19	7.78
TraesCS6D01G339300.1	Wheat	cytosol	14.96	6.37
TraesCS4D01G237900.1	Wheat	plastid	7.22	4.53
TraesCS2D01G386500.1	Wheat	cytosol	1.94	2.27
TraesCS2D01G190700.1	Wheat	cytosol	0.7	1.13
TraesCS7D01G150000.1	Wheat	mitochondrion	1.06	1.03

Protein Annotations

EnsemblPlants:TraesCS1D01G010200.1	EnsemblPlantsGene:TraesCS1D01G010200	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425	ncoils:Coil
PANTHER:PTHR23213	PANTHER:PTHR23213:SF250	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	MapMan:20.2.2.6.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:5426151..5429590

Molecular Weight (calculated)

60222.9 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.251

Length

568 amino acids

Sequence
(BLAST)

001: MPTSSSNPST EFLYLGTLAT PPPGSAPPPS HPRPGSPELR PLPPLPRVGP PSGEFGSRSS ASDPSTVPRA AAAVAGDASS SSLSPSSPSA SSPTLGSSPV
101: HIRPPSIPQP RGRAPNPSPP KRRPPPPPPP PQNQAWNPFV PVPPTQAAPP SDDDGDSSST NAAAMHKSRP LHSDKLKPGS LHMKDEMIQL YLNNSAAASA
201: AREVCLLGAP RCHGIGTVLG ALGFSEEQVR DALLEGNAHG LGVEALRMLA QLVLTNEEEL KLRYFKDDPP AKLCAVDAFL KTILDVPFAF KRVDAMLYVS
301: NFYLEVNQLR MSYATLEAAC QELRSSRLFH KVLGAVLNFG NMMSINTGSP NSHALEPNTL LKIVDVKGAD GKAALLQFVV QEIMKPEGHL GSAACKMNET
401: TSPPYGVDCR KHGLQVVAKL TAELTSTKKA ASVDMTGLSR SVSELGVGLG KVHDVLRLNG MAASAESARR FHNAMSAFLR QAEEEIVRLQ GQESVCLSSV
501: REVAEYFHGG DEAGNDEARL FRVFAGVREF VAMLDRICRE AGEVQGDRVG STPVSWMAAV GAPMGTTP

Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)

001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF

Arabidopsis Description

FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.