Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 97.98 99.35
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 94.87 97.73
AT3G25500.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 81.48 84.59
AT3G25493.1 Thale cress vacuole 11.82 80.62
PGSC0003DMT400056393 Potato cytosol 32.54 73.96
VIT_00s0227g00200.t01 Wine grape cytosol 9.99 71.24
GSMUA_Achr11P... Banana mitochondrion, plastid 27.13 68.84
Os01t0897700-01 Rice cytosol 14.85 66.39
GSMUA_Achr6P18370_001 Banana nucleus 33.73 65.36
GSMUA_Achr5P25760_001 Banana mitochondrion 24.2 60.14
KRH47952 Soybean cytosol 42.71 60.05
Solyc09g042740.2.1 Tomato endoplasmic reticulum, vacuole 46.84 56.22
Solyc06g082910.2.1 Tomato extracellular 47.75 55.66
PGSC0003DMT400071147 Potato endoplasmic reticulum, golgi 47.85 55.3
KRH06515 Soybean endoplasmic reticulum, plastid, vacuole 54.35 54.96
Bra029655.1-P Field mustard cytosol 14.3 51.49
KRH00989 Soybean extracellular, golgi, vacuole 48.12 50.53
GSMUA_Achr10P... Banana plastid 36.85 50.06
KRH40232 Soybean endoplasmic reticulum, extracellular 47.2 49.66
Bra012246.1-P Field mustard cytosol 8.71 48.47
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 29.7 48.29
Bra001256.1-P Field mustard plastid 16.77 48.03
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 31.35 47.3
OQU88036 Sorghum extracellular, plasma membrane 40.24 46.7
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 36.39 46.32
HORVU3Hr1G089510.1 Barley plasma membrane 40.33 46.27
TraesCS3A01G397900.1 Wheat plasma membrane 40.24 46.26
TraesCS3B01G429900.1 Wheat plasma membrane 40.33 46.12
Zm00001d012158_P001 Maize extracellular, plasma membrane 39.78 45.64
Zm00001d042506_P002 Maize extracellular, plasma membrane 39.78 45.4
TraesCS5A01G304700.1 Wheat golgi 32.63 45.24
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 32.63 45.18
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 32.54 45.17
TraesCS3D01G391800.1 Wheat mitochondrion 39.23 44.96
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 36.66 44.69
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 32.17 44.6
Zm00001d021173_P001 Maize plasma membrane 30.8 44.09
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 33.64 43.74
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 34.1 41.47
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 32.17 41.29
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 31.81 41.21
TraesCS1D01G010200.1 Wheat plastid 20.35 39.08
TraesCS1B01G059400.1 Wheat plastid 19.71 38.19
TraesCS1A01G011800.1 Wheat extracellular 18.15 37.15
Bra031838.1-P Field mustard cytosol 14.85 36.82
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 26.76 36.18
GSMUA_Achr7P23740_001 Banana plastid 39.51 35.95
HORVU1Hr1G002300.8 Barley plastid 23.19 34.94
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 15.12 33.67
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 24.66 32.84
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 24.75 32.53
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 24.01 31.83
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 23.74 31.74
EES17525 Sorghum endoplasmic reticulum, plasma membrane 22.91 30.52
Bra029012.1-P Field mustard plasma membrane 23.92 30.38
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 23.19 30.15
Bra039561.1-P Field mustard golgi 23.01 29.99
Bra002969.1-P Field mustard plasma membrane 24.01 29.87
Bra024640.1-P Field mustard vacuole 19.98 29.3
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 20.99 28.55
Bra017889.1-P Field mustard nucleus 16.5 22.78
Bra038438.1-P Field mustard extracellular 5.77 20.79
Bra007822.1-P Field mustard cytosol 15.4 15.03
Zm00001d035757_P003 Maize plasma membrane 22.64 14.68
Bra023204.1-P Field mustard cytosol 15.58 14.62
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 16.41 14.47
Bra002668.1-P Field mustard cytosol 16.22 13.7
Bra020385.1-P Field mustard cytosol 16.13 12.61
Bra005952.1-P Field mustard nucleus 16.59 12.23
Bra020386.1-P Field mustard cytosol 4.95 11.84
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 16.59 11.12
Bra009307.1-P Field mustard cytosol 7.97 10.78
Protein Annotations
Gene3D:1.20.58.2220MapMan:20.2.2.6.1EnsemblPlantsGene:Bra013217EnsemblPlants:Bra013217.1EnsemblPlants:Bra013217.1-Pncoils:Coil
InterPro:FH2_ForminGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005618
GO:GO:0005623GO:GO:0005886GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0030036GO:GO:0030312GO:GO:0045010GO:GO:0051015GO:GO:0051016
InterPro:IPR015425UniProt:M4D9Q7PFAM:PF02181PFscan:PS51444PANTHER:PTHR23213PANTHER:PTHR23213:SF261
SMART:SM00498SUPFAM:SSF101447SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002540893SEG:seg
Description
AT3G25500 (E=1e-250) AFH1, FH1, AHF1, ATFH1 | AFH1 (FORMIN HOMOLOGY 1); actin binding / actin filament binding / protein binding
Coordinates
chrA03:-:19804375..19807889
Molecular Weight (calculated)
119276.0 Da
IEP (calculated)
8.114
GRAVY (calculated)
-0.556
Length
1091 amino acids
Sequence
(BLAST)
0001: MLFLLFFYFL FSSSALADRR VLHEPFFPVD SPPPSPPQSP PLPKLPFSST TPPDATSPPF FPTYPSPPPP PSPASFASFP ANISSLIVPH ATKSPPSSKK
0101: LLIAAISAVT SAALVAALIA LLYWRRRRGR SSQESNAPDD SKTWTTDSSR RVYPPPPPTT AAPSARRNAE GRASKQRTTT TTARSSANTS SEFLYLGTMV
0201: NPRGVEDHQS VSNRSNNGSS SRKLESPDLQ PLPPLMKRSF RLNPEVGSIG EEDEEEFYSP RGSASGRETL TRVGSESRRV FSSVPNQNVR SVNNDTISCS
0301: SSSSGSPGRS TFISISPSMS PKRSEPKETV ISAPEPPPPK TSPGSSESSP SKITDFRLVR SPSLSLASLS PRLCPGKNAE GGGLGQISRS PTVTSLTTSP
0401: ERENKEENSL QNLDDDSPRS SSRSSASTSP ERRPNDTPEA YLRSPVHSSA STSPYRCFQK SPEVLPAFMS NLRQGLQSQL LSSPGQGFLN ELDALRSEKT
0501: SHKSPPEKGS HDPQSASSSS LSSSPDRDFS HSLDVSPRIS NISSQILQPP VSAARVPPPP PPPPPPFPTW ARRNQATPKV SRPPPLTPPS NPFVIPSENL
0601: PKTSPEETHK ETFSANEPAE ETPKPKLKAL HWDKVRASSD REMVWDQLRS SSFKLDEEMI ETLFVAKSLD SKPNQSQTTP RCVLPSPNQE NRVLDPKKAQ
0701: NIAILLRALN VTIEEVCTIC SWGRALNVTI EEVCEALLEG NAETLGTELL ESLLKMAPTK EEERKLKEYK DDSPVKLGHA EKFLKAMLDI PFAFKRVDAM
0801: LYVANFESEV DYLKNSFETL EAACEELRNS RMFLKLLEAV LKTGNRMNVG TNRGDAHAFK LDTLLKLVDV KGADGKTTLL HFVVQEIIRA EGTRLSGDNN
0901: TQTDDIKCRK LGLQVVSSLS SELSNVKKAA AMDSEVLSSY VSKLSQGIAK INEAIQIQST VTEESGSERF LESMNTFLKR AEEDIIRVQA QESVALSLVK
1001: EITEYFHGNS AKEEAHPFRI FLVVRDFLGV VDRVCKEVGM INERTMVSSA HKFPVPVNPM LPQPLPGLFG RKQSSSSSSS SSSDDEHNSS H
Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)
0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S
Arabidopsis Description
FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.