Factsheet for Bra020386.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02798	Canola	cytosol	90.79	84.49
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	41.89	41.34
Solyc07g005500.2.1	Tomato	cytosol	49.56	40.87
KRH03523	Soybean	cytosol	43.2	27.71
Bra002668.1-P	Field mustard	cytosol	67.32	23.76
KRH63288	Soybean	cytosol	47.59	22.94
Bra020385.1-P	Field mustard	cytosol	69.52	22.71
Bra007822.1-P	Field mustard	cytosol	49.78	20.3
Bra009307.1-P	Field mustard	cytosol	34.65	19.58
Bra023204.1-P	Field mustard	cytosol	44.96	17.63
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	49.78	17.08
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	45.61	16.81
KRH56878	Soybean	cytosol	42.98	16.24
GSMUA_Achr6P16780_001	Banana	cytosol	41.23	16.03
KRH54596	Soybean	extracellular	44.52	15.77
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	35.96	15.16
Bra005952.1-P	Field mustard	nucleus	48.46	14.93
Os04t0245000-00	Rice	plasma membrane	40.79	14.65
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.59	13.34
OQU90190	Sorghum	cytosol	44.96	12.48
Os07t0596300-02	Rice	plastid	44.3	12.42
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	44.96	12.07
Zm00001d006758_P003	Maize	cytosol	42.32	11.91
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	43.42	11.34
HORVU5Hr1G020180.51	Barley	mitochondrion	42.76	9.99
Zm00001d041515_P003	Maize	mitochondrion	42.11	8.97
KXG23793	Sorghum	cytosol	38.38	8.68
KRH03521	Soybean	plastid	8.77	5.91
Bra002969.1-P	Field mustard	plasma membrane	9.65	5.02
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	11.84	4.95
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	9.43	4.79
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	8.55	4.78
Bra039561.1-P	Field mustard	golgi	8.77	4.78
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	8.33	4.62
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	8.55	4.55
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	8.77	4.47
Bra029012.1-P	Field mustard	plasma membrane	8.11	4.31
Bra024640.1-P	Field mustard	vacuole	6.8	4.17
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	7.46	4.15
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	7.02	3.99
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	6.8	3.84
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	3.07	2.88
Solyc03g115680.2.1	Tomato	plastid	2.63	2.31
Bra017889.1-P	Field mustard	nucleus	3.29	1.9
Bra031838.1-P	Field mustard	cytosol	1.54	1.59
Zm00001d030780_P001	Maize	cytosol	0.44	1.12
Bra001256.1-P	Field mustard	plastid	0.66	0.79
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	0.44	0.41
Bra029655.1-P	Field mustard	cytosol	0.0	0.0
PGSC0003DMT400063143	Potato	cytosol	0.0	0.0
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	0.0	0.0
TraesCS5D01G089100.1	Wheat	cytosol	0.0	0.0
Bra012246.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d030781_P001	Maize	cytosol	0.0	0.0
Bra038438.1-P	Field mustard	extracellular	0.0	0.0

Protein Annotations

Gene3D:2.60.40.1110	Gene3D:3.90.190.10	MapMan:35.1	EnsemblPlantsGene:Bra020386	EnsemblPlants:Bra020386.1	EnsemblPlants:Bra020386.1-P
InterPro:IPR014020	InterPro:IPR029021	InterPro:IPR029023	UniProt:M4DV43	PFAM:PF10409	PRINTS:PR01217
PFscan:PS51181	PFscan:PS51182	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM01326
SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI000254306D	SEG:seg

Description

AT5G58160 (E=4e-155) | actin binding

Coordinates

chrA02:-:6501371..6503133

Molecular Weight (calculated)

51392.1 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.254

Length

456 amino acids

Sequence
(BLAST)

001: MDLLRKLFNR KTPDGLHEIC DQVFVFGSCL STDSLEEEKY KTYLTGAVNQ LQEHFPDASS LVFNFRDVVD TRSVVADVLS EHGLSVMDYP RHYQGCSLLP
101: VKVMKKFLCY CDSWLSLGPS ELILLHCERG AWPLLAFMLA ALLIYRKQYS DEYKTLDMIC KKAPVELMHL FSPLNPIPSQ LRYLQYVSRR TMVSEWPPTE
201: RALTVDCVML RCLPDVSGQG SFLRPVFRVY GQDPLFVDDD KKPELLYSSA KKGKHLKIYK QLFSNKVELV KIDDIKCHVQ GDIVIECLSN DMEVMMFRAV
301: FNTAFIRSNI LTLNRDEVDT LWDIKEQFPK GFGVEILFSD MDDDSSVDLT EKVGLPVEAF SNVHEFFNQV APNDVPSPLG QPVRSPPPVS KSDKTTALPP
401: PPPPPPPPPP PPPPPMQHSD QKTASRVFPP IPHPELATAA SPPPPPPPPP VHNKSP

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.