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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
plastid: 21307283
gfp PMID: 21307283 doi
Z Zhang, Y Zhang, H Tan, Y Wang, G Li, W Liang, Z Yuan, J Hu, H Ren, D Zhang
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU90190 Sorghum cytosol 75.66 74.97
PGSC0003DMT400063143 Potato cytosol 14.2 73.57
Zm00001d022040_P002 Maize cytosol, mitochondrion, nucleus, plasma membrane 75.29 72.1
Zm00001d006758_P003 Maize cytosol 71.05 71.31
Solyc03g115680.2.1 Tomato plastid 22.37 70.0
KRH03521 Soybean plastid 27.54 66.17
Os10t0119300-01 Rice mitochondrion 15.98 62.35
PGSC0003DMT400083163 Potato cytosol, mitochondrion, nucleus 4.43 58.54
AT5G07780.1 Thale cress plastid 16.47 57.76
Solyc03g115670.1.1 Tomato cytosol, mitochondrion 16.16 56.93
CDY40774 Canola cytosol 32.39 56.61
CDY14029 Canola cytosol 41.92 55.4
VIT_17s0000g06640.t01 Wine grape cytosol, mitochondrion, plasma membrane, plastid 45.05 55.15
CDX99025 Canola cytosol 37.0 51.63
KRH54596 Soybean extracellular 40.63 51.36
CDX69994 Canola plastid 37.43 51.31
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 38.11 50.12
KRH56878 Soybean cytosol 36.88 49.71
Os06t0184400-00 Rice mitochondrion 10.63 49.01
CDX81069 Canola nucleus 43.09 48.28
Bra005952.1-P Field mustard nucleus 43.7 48.04
CDX78309 Canola nucleus 43.76 47.56
GSMUA_Achr6P16780_001 Banana cytosol 34.23 47.49
KRH63288 Soybean cytosol 27.35 47.04
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 45.61 45.61
Bra020386.1-P Field mustard cytosol 12.42 44.3
AT5G07740.2 Thale cress nucleus 45.54 44.03
Solyc07g005500.2.1 Tomato cytosol 14.81 43.58
KRH03523 Soybean cytosol 18.93 43.32
Os08t0280200-02 Rice nucleus 22.25 40.54
CDY02798 Canola cytosol 12.11 40.2
AT5G07770.3 Thale cress plastid 17.64 39.37
Os02t0794900-00 Rice cytosol 32.21 38.0
CDX69993 Canola cytosol 27.66 37.1
CDX99026 Canola cytosol 28.64 36.66
AT5G07650.1 Thale cress cytosol 16.1 32.15
AT5G07760.2 Thale cress cytosol, plastid 16.96 31.83
Os04t0245000-00 Rice plasma membrane 22.62 28.98
Os04t0461800-01 Rice extracellular 9.96 19.45
Os07t0588200-01 Rice golgi, plasma membrane, vacuole 9.16 19.25
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 9.22 19.04
Os04t0100300-00 Rice plasma membrane 9.59 18.95
Os03t0204100-01 Rice plasma membrane 9.47 17.26
Os08t0431200-00 Rice cytosol 5.35 16.73
Os10t0347800-00 Rice cytosol, nucleus, plastid 8.79 16.73
Os01t0897700-01 Rice cytosol 2.46 16.39
Os07t0545500-01 Rice plasma membrane 9.28 16.25
Os02t0161100-01 Rice golgi 8.17 15.1
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 6.82 13.37
Protein Annotations
Gene3D:1.20.58.2220Gene3D:2.60.40.1110MapMan:20.2.2.6.2Gene3D:3.90.190.10EntrezGene:4343793EMBL:AK120222
EMBL:AP014963ProteinID:BAC55695.1ProteinID:BAF22085.2ncoils:CoilUniProt:F1BVF5InterPro:FH2_Formin
GO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0006464GO:GO:0006470GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0019538EMBL:HQ123580InterPro:IPR014020
InterPro:IPR015425InterPro:IPR029021InterPro:IPR029023EnsemblPlantsGene:Os07g0596300EnsemblPlants:Os07t0596300-02PFAM:PF02181
PFAM:PF10409PFscan:PS51181PFscan:PS51182PFscan:PS51444PANTHER:PTHR23213PANTHER:PTHR23213:SF271
InterPro:Prot-tyrosine_phosphatase-likeUniProt:Q84ZL0SMART:SM00498SMART:SM01326SUPFAM:SSF101447SUPFAM:SSF49562
SUPFAM:SSF52799InterPro:Tensin_C2-domInterPro:Tensin_phosphataseUniParc:UPI0001642870RefSeq:XP_015646968.1SEG:seg
Description
BENT UPPERMOST INTERNODE 1Actin-binding FH2 domain containing protein. (Os07t0596300-01);Class II formin, Type II formin, Actin organization, Morphogenesis (Os07t0596300-02)
Coordinates
chr7:-:24266479..24276820
Molecular Weight (calculated)
176363.0 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.614
Length
1627 amino acids
Sequence
(BLAST)
0001: MALFRKFFLK KTPDRLLEIS ERVYVFDCCF STDSMGEDEY RDYLSGIVAQ LQDYFPDASF MVSNFWSGDK RSRISDILSE YDMTVMDYPQ QYEGCPLLQL
0101: EMIHHFLKSC ENWLSVEGQH NMLLMHCERG GWPVLAFMLA GLLLYRKTYT GEQKTLEMVY KQARRDFIQQ FFPLNPQSSH MRYLHYITRQ GSGPEKPPIS
0201: RPLILDSIVL HVVPRFDAEG GCRPYLRVHG QDSSSSNKSA KVLYEMPKTK KHLQRYGQAE VPVKVGAFCR VQGDVVLECI HIGDNLDHEE IMFRVMFNTA
0301: FIQSNILGLN RDDIDVSWNS NNQFPRDFRA EVVFSDPGSF KPAAATVEEV DDDGDETDVA SVDTGEEFYE AEEDWHDARR DPETQSTDGR TSIGDAELDG
0401: GVSREDSGSL EKHRADEDVK IVISQNLGCM SDRPVSAPAE ILGNPGGLQQ ACENEEMPKL SNRSDQDDNA VQDIQVVAAS VDSEGHKFGS ICQKEDMKGV
0501: IAQTLVTAID PSCSDEVQCQ PDESAKILKY PNLDYTGFSS PRTLSSVDED TRLGTIPNVA LQNADVKIIT ESTVIVDNEL VIYEEKTIVD NGNLTQEVKN
0601: VVNEESTTPK LDRSVIESVD SQDNKNHKME VAKAADTTDS KMEQTKLKSG LEDAISLKKT TVQGSIVVLP ATEIATKIKT KREESGGRRD VGISLPQSKI
0701: EARAKSPRIS SDRRQIPDKV VPSKKMPVDH APEAVLLEEK LGNSDQSQEQ PKAVKPKTVR RWISPNKESE TTSVHRPSHP PSRYDSSPAA LAIHSMHTNN
0801: KFNVGKDAPL VSSGAQAVPK IQAAPPPPPP PPPPYASSSS LSMHMGSATK QQPPPPPPPP PLPPPPPPPA SSGLSSIPPP PPPPPLMSFG AQTRTFVPPP
0901: PPPPPPPRSG VGGNTPPAPP PPPLRSTVPA ISPPPPPPPP PLKPSSGAPC PPPPPPPPPP PPPSAPSSRA FSSAPPPPPP PPLLRSVPPP PPPPPISHSN
1001: APPPPPLPAA RFNAPPPPPP PPTTHFNAPP PPPPPPITRS GAPPSPPPPP SPPPPPPPPG ARPGPPPPPP PPGARPGPPP PPPPPGGRPS APPLPPPGGR
1101: ASAPPPPPPP STRLGAPPPP PPPGAGGRAP PPPPAPGGRL GGPPPPPPPG GRAPPPPRGP GAPPPPGGNP SSLIGRGRGV VRASGSGFGA AAARKSTLKP
1201: LHWIKVTRAL QGSLWEELQR NDDSQSVSEF DLSELESLFP AAVPKPNDSS KSDSRRKSLG SKPEKVHLIE LRRANNTEIM LTKVKMPLPD LVSAALALDQ
1301: STLDVDQVEN LIKFCPTKEE MELLKNYTGD KENLGKCEQF FLELMKVPRM ESKLRVFSFK IQFGSQVADL RKSLNTIDSS CDEIRSSLKL KEIMKKILLL
1401: GNTLNQGTAR GAAVGFRLDS LLKLTDTRAT NNKMTLMHYL CKVLAAKSSQ LLDFYMDLVS LEATSKIQLK MLAEEMQAVS KGLEKVQLEY NASESDGPVS
1501: EIFREKLKEF TDNAGADVQS LSSLFSEVGK KADALIKYFG EDPVRCPFEQ VISTLLTFVT MFRKAHEENR KQAELDKKRA EKEAEAEKSK AQLASKNDSK
1601: PSNPSRQVKQ TPDTKTRAAS RRGKDVG
Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS
Arabidopsis Description
actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.