Factsheet for Bra005952.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
peroxisome 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
PTS1:	peroxisome
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78309	Canola	nucleus	99.73	98.6
PGSC0003DMT400063143	Potato	cytosol	16.35	77.07
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	84.53	76.89
AT5G07740.2	Thale cress	nucleus	84.93	74.69
Solyc03g115680.2.1	Tomato	plastid	25.61	72.88
KRH03521	Soybean	plastid	32.36	70.75
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	58.58	70.09
Solyc03g115670.1.1	Tomato	cytosol, mitochondrion	21.55	69.05
PGSC0003DMT400083163	Potato	cytosol, mitochondrion, nucleus	5.41	65.04
Zm00001d030781_P001	Maize	cytosol	4.59	63.55
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	55.41	61.7
TraesCS5D01G089100.1	Wheat	cytosol	12.7	61.44
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	20.14	61.32
KRH54596	Soybean	extracellular	53.31	61.31
KRH56878	Soybean	cytosol	46.96	57.58
KRH63288	Soybean	cytosol	35.68	55.81
KRH03523	Soybean	cytosol	26.08	54.29
Bra038438.1-P	Field mustard	extracellular	11.08	54.13
Zm00001d030780_P001	Maize	cytosol	6.01	50.0
Solyc07g005500.2.1	Tomato	cytosol	18.45	49.37
Bra020386.1-P	Field mustard	cytosol	14.93	48.46
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	35.27	48.24
Bra007822.1-P	Field mustard	cytosol	36.01	47.67
Bra023204.1-P	Field mustard	cytosol	37.03	47.12
GSMUA_Achr6P16780_001	Banana	cytosol	37.16	46.89
Os07t0596300-02	Rice	plastid	48.04	43.7
Bra002668.1-P	Field mustard	cytosol	37.91	43.42
OQU90190	Sorghum	cytosol	48.11	43.36
Zm00001d006758_P003	Maize	cytosol	45.95	41.95
Zm00001d022040_P002	Maize	cytosol, mitochondrion, nucleus, plasma membrane	48.04	41.85
Bra009307.1-P	Field mustard	cytosol	21.89	40.15
Bra020385.1-P	Field mustard	cytosol	37.3	39.54
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	42.16	35.74
HORVU5Hr1G020180.51	Barley	mitochondrion	45.61	34.6
KXG23793	Sorghum	cytosol	44.59	32.74
Zm00001d041515_P003	Maize	mitochondrion	46.28	32.01
Os04t0245000-00	Rice	plasma membrane	25.68	29.92
Bra029655.1-P	Field mustard	cytosol	4.66	22.77
Bra001256.1-P	Field mustard	plastid	5.14	19.95
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	10.81	19.61
Bra029012.1-P	Field mustard	plasma membrane	11.22	19.32
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	6.35	19.18
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	11.62	19.18
Bra002969.1-P	Field mustard	plasma membrane	11.28	19.04
Bra039561.1-P	Field mustard	golgi	10.74	19.0
Bra024640.1-P	Field mustard	vacuole	9.46	18.82
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	10.41	18.8
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	10.0	18.45
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	10.14	17.5
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	9.73	17.5
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	10.54	17.43
Bra012246.1-P	Field mustard	cytosol	2.23	16.84
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	12.23	16.59
Bra017889.1-P	Field mustard	nucleus	8.38	15.7
Bra031838.1-P	Field mustard	cytosol	4.32	14.55
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	7.09	13.01

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra005952	EnsemblPlants:Bra005952.1
EnsemblPlants:Bra005952.1-P	ncoils:Coil	InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M4CP14	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI000253F6D0
SEG:seg	:	:	:	:	:

Description

AT5G07770 (E=2e-142) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA03:-:1373493..1380081

Molecular Weight (calculated)

160683.0 Da

IEP (calculated)

7.255

GRAVY (calculated)

-0.619

Length

1480 amino acids

Sequence
(BLAST)

0001: MALFRRFFYK KPPDHLLEIS ERLYVFDCCF SSDVMGEDEY KLYLGGIVAQ LQDHFPDASF MVFNFREGDQ RSQISDVLSQ YDMTVMDYPR HYESCPLLPL
0101: EMIHHFLKSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYQ GEVKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR DLGSDWPPSE
0201: TPLLLDCLIL RDLPRFEGRE GCRPIVRVYG QDPKARANRS SVVLFSTPKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVR EEIIFRIMFH
0301: TAFVRANILI VQREEMDILW DAKDQFPKEF KAEVLFSGAD SVVPTIATAP VSDDDESDFD MASPDEFYEV EEIFSDAVDG HELKRGDSDG FVVVDSASDD
0401: SEGKEVWKGD VEPNAFLDCA SDDSNHKHEA SADPVKDITV DDVQYRSDGT SIDSVKDIGI DDGDEQRKRR TMEAKENDSR TAEKAQAKPR KQVGANAKLA
0501: GDALKPKSNV RMAKPNAVSR WIPSNKGSYK DSMHVAYPHT RINSAPASIT TSLKDGKRAT SPDGVVTKEA KSKNLRASVS SPDVRSRAPS CLSPEFSPKE
0601: KPPSLPASPH YAPPPPQHSP SPPEQPSLSS EAASPPPPPP PPPTYSSPSQ NDSYSQTSQI PPPPPPPPFA SKRPNSGSML PPPPPPPPLA SEKPKTGTVL
0701: PPLPLSPPWK SVFASALATP TTCSTSQPPP PPQTSSQSQT SQLPLPPSPP PPPPFASVRR NSETMLPPPP PPPPWKSVYT STLETHEACS TSNNFPPPPP
0801: PPLPPFSSSK ENGDHVTPSS LPYLSNAPSP SPKSSPINGF SAPPPPFSKP HSVPPPPPPS YGSPTPPPPQ PPSYGTPPPP PPPFGKTSPP PPPPPPPFGS
0901: SCPPPPPPPP FRSGGPPPPP PPPMGAPPPP PPPMHRGAPP PPPPPMRGGA PPPPPPPMLG GAPPPPPPPM RGGAPPPPPP PMLGGAPPPP PPPMRGGAPP
1001: PPPPPGGRAP GGPPPPPPPG GRAPGPPPPP GPRPPGGGPP PPPGPRPPGG GPPDLKGAGR GRGLSRPGLG SSAQKKSSLK PLHWVKVTRA LQGSLWDELQ
1101: RQGQTAPEFD VSEIETLFSA IVPKPVDKSR KKSVGAKPEK IQLIDLRRAN NTEIMLTKVK MPLPDMMAAV LAMDDTVLDS DQIEILIKFC PTKEEMELLK
1201: NYTGDKAVLG KCEQYFLELM KVPRVESKMR VFSFKIQFGT QITEFKKSLT AVNSACEEVR TSPKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS
1301: DTRAANSKMT LMHYLCKVLA SQGSDLLDFP KDLESLESAS KIQLKSLAEE MQAIIKGLEK LNQELNASES DGPVSEVFRK TLKDFISVAT TETAAVTSLY
1401: SVVGNNADAL AHYFGEDPKR CPFEQVTATL LNFIRLFKKA HEENIKQEEL EKKKAAKEAE MEKEKAKGVN LTKTADDDDS

Best Arabidopsis Sequence Match ( AT5G07740.3 )
(BLAST)

0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PWKSLYASTF ETHEACSTSS SPPPPPPPPP FSPLNTTKAN DYILPPPPLP
0901: YTSIAPSPSV KILPLHGISS APSPPVKTAP PPPPPPPFSN AHSVLSPPPP SYGSPPPPPP PPPSYGSPPP PPPPPPSYGS PPPPPPPPPG YGSPPPPPPP
1001: PPSYGSPPPP PPPPFSHVSS IPPPPPPPPM HGGAPPPPPP PPMHGGAPPP PPPPPMHGGA PPPPPPPPMH GGAPPPPPPP MFGGAQPPPP PPMRGGAPPP
1101: PPPPMRGGAP PPPPPPMRGG APPPPPPPMH GGAPPPPPPP MRGGAPPPPP PPGGRGPGAP PPPPPPGGRA PGPPPPPGPR PPGGGPPPPP MLGARGAAVD
1201: PRGAGRGRGL PRPGFGSAAQ KKSSLKPLHW VKVTRALQGS LWDELQRHGE SQTPSEFDVS EIETLFSATV QKPADKSGSR RKSVGAKPEK VQLIDLRRAN
1301: NTEIMLTKVK MPLPDMMAAV LAMDESVLDV DQIENLIKFC PTKEEMELLK NYTGDKTTLG KCEQYFLELM KVPRVEAKLR VFSFKFQFGT QITEFKKSLN
1401: AVNSACEEVR SSQKLKEIMK KILYLGNTLN QGTARGAAVG FKLDSLSKLS DTRAANSKMT LMHYLCKVLA SKASVLLDFP KDLESLESAS KIQLKSLAEE
1501: MQAIIKGLEK LNQELTASES DGPVSDVFRK TLGDFISVAE TEVATVSSLY SVVGRNADAL AHYFGEDPNR CPFEQVTATL LNFIRLFKKA HEENVKQAEL
1601: EKKKALKEAE MEKAKGVNLT KKPVDDS

Arabidopsis Description

actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.