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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane, plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79799 Canola mitochondrion, plastid, vacuole 89.15 96.22
AT2G43800.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 76.43 73.27
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 74.45 71.28
GSMUA_Achr11P... Banana mitochondrion, plastid 28.94 57.67
GSMUA_Achr5P25760_001 Banana mitochondrion 27.19 53.08
GSMUA_Achr6P18370_001 Banana nucleus 33.72 51.33
Os01t0897700-01 Rice cytosol 14.59 51.23
Bra012246.1-P Field mustard cytosol 10.74 46.94
Bra029655.1-P Field mustard cytosol 16.57 46.86
PGSC0003DMT400064911 Potato endoplasmic reticulum, plasma membrane 38.62 43.84
Solyc12g019480.1.1 Tomato nucleus 45.39 43.81
VIT_05s0094g00920.t01 Wine grape nucleus 47.49 43.76
PGSC0003DMT400013717 Potato plastid 43.76 43.55
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 33.84 43.22
GSMUA_Achr10P... Banana plastid 40.49 43.21
Solyc08g014430.2.1 Tomato nucleus 37.81 42.8
GSMUA_Achr2P11400_001 Banana endoplasmic reticulum, extracellular 35.82 42.46
KRH71295 Soybean vacuole 43.41 42.27
Os09t0517600-01 Rice endoplasmic reticulum, plasma membrane 38.51 41.88
KRH50174 Soybean vacuole 43.64 41.74
Bra001256.1-P Field mustard plastid 18.55 41.73
TraesCS5B01G305100.1 Wheat golgi, plasma membrane 37.92 41.3
Zm00001d021173_P001 Maize plasma membrane 36.64 41.21
TraesCS5D01G311600.1 Wheat golgi, plasma membrane 37.69 41.09
TraesCS5A01G304700.1 Wheat golgi 37.57 40.91
GSMUA_Achr9P02450_001 Banana plasma membrane, plastid 38.97 39.81
OQU88036 Sorghum extracellular, plasma membrane 42.36 38.62
EER97050 Sorghum endoplasmic reticulum, plasma membrane, plastid 38.16 38.47
Zm00001d042506_P002 Maize extracellular, plasma membrane 42.82 38.39
Zm00001d012158_P001 Maize extracellular, plasma membrane 42.47 38.28
Zm00001d006132_P001 Maize golgi, mitochondrion, plastid 37.57 38.24
TraesCS3A01G397900.1 Wheat plasma membrane 41.54 37.51
HORVU3Hr1G089510.1 Barley plasma membrane 41.31 37.22
TraesCS3B01G429900.1 Wheat plasma membrane 41.42 37.21
TraesCS3D01G391800.1 Wheat mitochondrion 41.31 37.18
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 38.74 37.01
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 46.32 36.39
TraesCS1D01G010200.1 Wheat plastid 23.45 35.39
TraesCS1B01G059400.1 Wheat plastid 23.1 35.17
TraesCS1A01G011800.1 Wheat extracellular 20.54 33.02
HORVU1Hr1G002300.8 Barley plastid 27.77 32.87
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 18.79 32.86
Bra031838.1-P Field mustard cytosol 16.8 32.73
Os05t0104000-00 Rice endoplasmic reticulum, plasma membrane 30.69 31.69
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 28.7 30.48
GSMUA_Achr7P23740_001 Banana plastid 41.31 29.52
EES17525 Sorghum endoplasmic reticulum, plasma membrane 28.0 29.3
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 28.0 29.3
TraesCS1B01G414300.1 Wheat endoplasmic reticulum 28.12 28.72
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.3 28.68
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 27.54 28.68
Bra024640.1-P Field mustard vacuole 24.39 28.09
Bra039561.1-P Field mustard golgi 27.19 27.84
Bra002969.1-P Field mustard plasma membrane 28.24 27.59
Bra029012.1-P Field mustard plasma membrane 27.42 27.36
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 24.85 26.56
Bra017889.1-P Field mustard nucleus 20.54 22.28
Bra038438.1-P Field mustard extracellular 7.82 22.11
Zm00001d035757_P003 Maize plasma membrane 28.12 14.32
Bra007822.1-P Field mustard cytosol 16.92 12.97
Bra023204.1-P Field mustard cytosol 17.04 12.55
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 17.5 12.13
Bra002668.1-P Field mustard cytosol 16.69 11.07
Bra005952.1-P Field mustard nucleus 17.5 10.14
Bra020385.1-P Field mustard cytosol 16.45 10.1
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 17.5 9.22
Bra020386.1-P Field mustard cytosol 4.55 8.55
Bra009307.1-P Field mustard cytosol 7.7 8.18
Protein Annotations
EnsemblPlants:Bra004786.1EnsemblPlants:Bra004786.1-PEnsemblPlantsGene:Bra004786Gene3D:1.20.58.2220GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:FH2_ForminInterPro:IPR015425ncoils:CoilPANTHER:PTHR23213PANTHER:PTHR23213:SF276
PFAM:PF02181PFscan:PS51444SEG:segSignalP:SignalP-noTMSMART:SM00498SUPFAM:SSF101447
TMHMM:TMhelixUniParc:UPI0002547C3EUniProt:M4CKQ1MapMan:20.2.2.6.1::
Description
AT2G43800 (E=5e-200) | formin homology 2 domain-containing protein / FH2 domain-containing protein
Coordinates
chrA05:+:1822215..1825011
Molecular Weight (calculated)
94104.3 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.559
Length
857 amino acids
Sequence
(BLAST)
001: MSRIPSLLRF ATILFLFSSS SSSADQRLHS RHLLHQPFFP IPTAAPPPYQ PPPPSSEPPS PSPRSHHHHK NHPETPPPHE KHPFSSASNP PPPPPPPPSP
101: PHPNTFFPSS DPSSPTSHPP PSPSPPHRAP VPTFPANISS LVFPTHNKPH NSNPHVAKLL AITIAVVSAA ILLSLLAVAT IFLRRRRRRA SPAKSTKTDA
201: RHLFNAAPSD VPLKHKQPPK YTSSNTSSEF LYLGTLVNSG LVDQQKSPGS VAGVLELPPA QGSSSSTPSY SQYQKLGSPE LRPLPPLPKL PVYTPNYRST
301: ELLNPKGQDF DGDDNENDEF YSPRGSPVRK QSPPRVKNSG SPGTSLKPPK SSLSPRLSLN SSNGSVSKKP VPTRPPPPPP PQIHVLPVTN SVSEEKDETF
401: KPKLKPLHWD KVRASSSRVT VWDQIKSNSF QVNEEMIETL FRANDPTSRT KESVTTDVVQ STSHQFLDPR KSHNIAILLR ALNVTADEVC EALVEGNSDA
501: LGSELLQCLL KMAPTKEEED KLKELKEDDD DESSPSKTGP AERFLRALLN IPLAFKRINA MLYIVNFESE TEYLKRSFHT LEAACGELRN TRMFLKLLEA
601: VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK SEGARVSTTP TQSPVGVNMA EQSAFQDDLE LKKLGLQVVS TLSSQLTNVK
701: KAAAMDSTSL SDEAAELSKG ITKVKEVIME LKQETGVERF LDSMNSFLNK AEKEITEVQS HGDSVMKMVK EVTEYFHGNS ESHPSRIFTV VRDFLTVLDQ
801: VCKEVGRVNE RTVYGSVPRA SVSNQVVTPL FPVANNDNNS EKSHSGSLGN QEDEDLF
Best Arabidopsis Sequence Match ( AT2G43800.1 )
(BLAST)
001: MTTIPFCFLF VAFFFSSSTA DQRHHSRHLL HQPFFPVVTA APPPYQPPVS SQPPSPSPHT HHHHKKHLTT TTPPPHEKHL FSSVANPPPP PPSPPHPNPF
101: FPSSDPTSTA SHPPPAPPPP ASLPTFPANI SSLLFPTHNK QSKPPSNGHI ARLVTITASV ISAAALLSLF AVFIIFIRRT RHRRRSSPAD DTKSTRSDAL
201: QLFNASPSDG SKKQKQHQQP PKYTSSHTSS EFLYLGTLVN SRSNGLEQQK SPISLSGGIT GVLELPPPAS SSSSSSYSQY HKLGSPELRP LPPLPKLQSF
301: TPVYKSTEQL NPKRQDFDGD DNENDEFFSP RGSSGRKQSP TRVSDVDQID NRSINGSGSN SCSPTNFAPS LNASPGTSLK PKSISPPVSL HSQISSNNGI
401: PKRLCPARPP PPPPPPPQVS EVPATMSHSL PGDDSDPEKK VETMKPKLKT LHWDKVRASS SRVMVWDQIK SNSFQVNEEM IETLFKVNDP TSRTRDGVVQ
501: SVSQENRFLD PRKSHNIAIL LRALNVTADE VCEALIEGNS DTLGPELLEC LLKMAPTKEE EDKLKELKDD DDGSPSKIGP AEKFLKALLN IPFAFKRIDA
601: MLYIVKFESE IEYLNRSFDT LEAATGELKN TRMFLKLLEA VLKTGNRMNI GTNRGDAHAF KLDTLLKLVD IKGADGKTTL LHFVVQEIIK FEGARVPFTP
701: SQSHIGDNMA EQSAFQDDLE LKKLGLQVVS GLSSQLINVK KAAAMDSNSL INETAEIARG IAKVKEVITE LKQETGVERF LESMNSFLNK GEKEITELQS
801: HGDNVMKMVK EVTEYFHGNS ETHPFRIFAV VRDFLTILDQ VCKEVGRVNE RTVYGSMPLH SPSNQTATPL FPVVINNNSR LSPSGSLDDD DGSF
Arabidopsis Description
FH2Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VS83]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.