Factsheet for GSMUA_Achr6P18370_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0227g00200.t01	Wine grape	cytosol	18.83	69.28
GSMUA_Achr7P26240_001	Banana	cytosol	40.5	68.88
GSMUA_Achr11P...	Banana	mitochondrion, plastid	52.58	68.84
PGSC0003DMT400056393	Potato	cytosol	56.13	65.83
GSMUA_Achr5P25760_001	Banana	mitochondrion	46.36	59.45
GSMUA_Achr4P07090_001	Banana	cytosol	46.0	56.3
AT3G25493.1	Thale cress	vacuole	15.28	53.75
Bra029655.1-P	Field mustard	cytosol	27.53	51.16
Bra012246.1-P	Field mustard	cytosol	16.7	47.96
KRH47952	Soybean	cytosol	64.65	46.91
GSMUA_Achr10P...	Banana	plastid	63.23	44.33
Bra001256.1-P	Field mustard	plastid	28.95	42.78
VIT_05s0094g00920.t01	Wine grape	nucleus	68.03	41.18
PGSC0003DMT400013717	Potato	plastid	60.92	39.84
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	62.88	38.94
GSMUA_Achr7P18740_001	Banana	nucleus	34.99	38.63
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	49.02	38.17
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	33.57	38.03
GSMUA_Achr7P23740_001	Banana	plastid	80.82	37.95
Solyc12g019480.1.1	Tomato	nucleus	59.68	37.84
KRH71295	Soybean	vacuole	58.79	37.61
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	50.09	37.35
Solyc08g014430.2.1	Tomato	nucleus	49.73	36.99
KRH50174	Soybean	vacuole	58.79	36.94
Solyc06g082910.2.1	Tomato	extracellular	60.92	36.65
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	60.92	36.33
GSMUA_Achr6P04430_001	Banana	cytosol	27.0	35.76
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	52.04	34.92
CDX83457	Canola	golgi, plasma membrane, vacuole	51.87	34.64
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	65.01	34.56
CDX79799	Canola	mitochondrion, plastid, vacuole	48.67	34.51
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	64.3	34.44
CDY44259	Canola	plasma membrane, vacuole	51.51	34.4
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	65.36	34.2
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	65.01	33.92
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	65.36	33.73
CDY17909	Canola	golgi, vacuole	50.8	33.73
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	51.33	33.72
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	53.46	33.67
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	52.04	32.74
KRH00989	Soybean	extracellular, golgi, vacuole	60.21	32.63
KRH40232	Soybean	endoplasmic reticulum, extracellular	59.33	32.21
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	35.88	31.12
AT5G48360.1	Thale cress	extracellular, vacuole	39.61	28.52
CDX85333	Canola	plasma membrane	39.43	26.97
CDY35941	Canola	plastid	35.88	26.97
CDX86310	Canola	endoplasmic reticulum, plasma membrane	37.83	26.39
CDY28040	Canola	plastid	36.06	26.36
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	37.66	26.27
GSMUA_Achr2P14090_001	Banana	mitochondrion	30.91	26.17
CDX74041	Canola	golgi, plasma membrane, plastid	32.86	25.95
CDY07990	Canola	golgi, plasma membrane, plastid	32.68	25.48
AT3G07540.1	Thale cress	plasma membrane	36.41	24.38
GSMUA_Achr1P25960_001	Banana	mitochondrion	9.06	24.29
GSMUA_Achr8P22610_001	Banana	plasma membrane	31.26	23.22
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	18.65	21.6
GSMUA_Achr5P13600_001	Banana	extracellular	11.01	20.88
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	18.29	15.06
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	19.18	9.98
GSMUA_Achr3P04690_001	Banana	cytosol	19.18	9.48
GSMUA_Achr6P16780_001	Banana	cytosol	18.83	9.04
GSMUA_Achr1P25970_001	Banana	cytosol	10.48	7.91
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	19.01	6.13
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	8.53	5.16
GSMUA_Achr5P13590_001	Banana	cytosol	7.82	4.78
GSMUA_Achr3P13420_001	Banana	cytosol	1.95	1.77
GSMUA_Achr1P25980_001	Banana	plasma membrane	0.36	0.71

Protein Annotations

EnsemblPlants:GSMUA_Achr6P18370_001	EnsemblPlants:GSMUA_Achr6T18370_001	EnsemblPlantsGene:GSMUA_Achr6G18370_001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF276	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI000294B010	UniProt:M0T835	MapMan:20.2.2.6.1	:

Description

Formin-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G18370_001]

Coordinates

chr6:-:12641035..12644529

Molecular Weight (calculated)

61856.5 Da

IEP (calculated)

7.953

GRAVY (calculated)

-0.461

Length

563 amino acids

Sequence
(BLAST)

001: MDGSSERKMG SPELRPLPPL PRQFRHGHGN GETGTSSEEE FYSPRLSSAG RGSPGRGIGG QMSSPRRTFP AALDNCGSRS STMSTPSYPT SIMASSPQSS
101: PVASSPRVGS SPGHSFGGSL KSRSERNLTG SLETRRRKLK PLHWDKVQAR SNRAMVWDQL QSSSFQVNEE MIETLFVSNA TDAKPKETNK QQLLPSQTQA
201: NDKVLDPKKS QNIAILLRAL NVTNEEVCEA LLEAGNADSL GTELLETLLK MAPSKEEEHK LKDYKNDSPF KLGTAEKFLK ALLDIPFAFK RVDAMLYVAN
301: FDSEVNFLNK SFETLEAACE ELRSSRLFIK LLEAVLKTGN RMNVGTNRGD AHAFKLDTLL KLVDVKGTDG KTTLLHFVVQ EIIKSEECRK LGLQVVAGLG
401: GELSNVKKAA AMDSDVLSSY VSKLAGGIGK INEVLRLNGA SGSEENSQRF RNAMNQFLER AEDDIIKVQA QESVALSLVK EITEYFHGNS AREEAHPFRI
501: FMVVRDFLAI LDQVCKEVGR INERTIVSSA RQFPVPVNPT LPHVFPIHAS RPEGSDEESS LSS

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.