Factsheet for GSMUA_Achr3P04690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P25960_001	Banana	mitochondrion	14.22	77.14
GSMUA_Achr1P25980_001	Banana	plasma membrane	16.15	65.02
GSMUA_Achr5P13600_001	Banana	extracellular	16.24	62.29
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	26.34	61.73
AT3G32400.2	Thale cress	cytosol	25.72	59.19
GSMUA_Achr3P13420_001	Banana	cytosol	28.18	51.77
Bra007822.1-P	Field mustard	cytosol	50.31	51.25
CDY34742	Canola	cytosol	50.04	50.76
CDX76779	Canola	cytosol	49.69	50.67
AT2G25050.1	Thale cress	cytosol	51.45	50.17
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	29.68	49.42
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	44.42	46.77
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	56.45	43.68
GSMUA_Achr6P16780_001	Banana	cytosol	43.81	42.54
KRH05363	Soybean	cytosol	53.56	41.67
GSMUA_Achr1P25970_001	Banana	cytosol	25.64	39.14
GSMUA_Achr5P13590_001	Banana	cytosol	28.89	35.76
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	27.48	33.62
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	46.36	30.24
GSMUA_Achr7P18740_001	Banana	nucleus	10.8	24.12
GSMUA_Achr7P26240_001	Banana	cytosol	6.85	23.57
GSMUA_Achr11P...	Banana	mitochondrion, plastid	8.78	23.26
GSMUA_Achr5P25760_001	Banana	mitochondrion	8.43	21.87
GSMUA_Achr4P07090_001	Banana	cytosol	8.25	20.43
GSMUA_Achr6P18370_001	Banana	nucleus	9.48	19.18
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	8.34	19.11
GSMUA_Achr6P04430_001	Banana	cytosol	6.94	18.59
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	10.45	18.34
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	11.5	18.12
GSMUA_Achr10P...	Banana	plastid	12.64	17.93
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	13.08	17.76
GSMUA_Achr2P14090_001	Banana	mitochondrion	9.92	16.99
GSMUA_Achr8P22610_001	Banana	plasma membrane	10.27	15.44
GSMUA_Achr7P23740_001	Banana	plastid	12.64	12.01

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	ncoils:Coil	InterPro:FH2_Formin
EnsemblPlantsGene:GSMUA_Achr3G04690_001	EnsemblPlants:GSMUA_Achr3P04690_001	EnsemblPlants:GSMUA_Achr3T04690_001	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M0SBT7	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0002957E53
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G04690_001]

Coordinates

chr3:+:3022156..3033109

Molecular Weight (calculated)

128647.0 Da

IEP (calculated)

7.447

GRAVY (calculated)

-0.237

Length

1139 amino acids

Sequence
(BLAST)

0001: MALFKRFFYR KPPDGLLEIS ERVYVFDQCF STDALREDDY KECMGGIVMQ MRSHFPDASF MIFNFWDGES ESQLASILSE FDMTVIDYPR HYEGCPLLKM
0101: EMVHHMLRSC ESWLCLGQQN LVLMHCERGG WPVMAFMLAA LLIYLRQYTG EQRTLDMIYK QAPRELLEFF SPLNPVPSQL RYLQYVSRSV ASEWPPLDRA
0201: LTLDCVILRM IPIFDSEGGC RPIFRIYGQD PFFVSENTTK VLFSTPKKSK LVRHYKQADC ELVKIDIGCH IQGDVVIECI SLDEDQEREE MMFRVVFNTA
0301: FIRSNILMLS RDQIDILWDA KDRFPKDFRA EVLLSEMDTA SSLMTLELAH MEDKDGLPIE AFAKVHEIFS HLDWLEGKGD STLYILQQIT SSNSLEDKLS
0401: EVSHQKMQSC NMSQSSSSHI VMKNLQDDQG TDHGASETAE VKVMPLSFSI SPPPPPLPPP PPKLASQGSI RILSPPPPPP PPQPFTVPTS SVMSKSPLLP
0501: SMQPPASVLA SSVPSDKSNK IPTAASQSSR TQSVPPPPTP TISPFNSVSS GIKGRNLTRS RSPRSLYTSQ SSSSRRMSLK PLHWSKVTRA MSGSLWADTQ
0601: ISDELPKTPE IDMSELESLF SAQLPNSDSS SVAEKSKRRS SLSGRSDKVH LVFTSMHILL GISNFSPCLF CYRINLYKSY SNQVRRGITT QSDHHEKGQP
0701: SKEVPANAGY GEAVRGNMCS FASVIITIAT FDFLQSWHKF TFLSISLHLR LMNKRQKLMM TFNLKYHDGI FLSVMKLFKF VIVIGCNLKI FDIVLIALRR
0801: ANNCEIMLTK VTVPIPDLMS SVLALDESIL DADQVDNLIK FCPTKEEIEL LQGYKGDKES LGKCEQFFLE LMKVPRVDCK LRVFSFKLQF SSQVADLRSN
0901: LNTVNSVSEE IRSSVKLKKI MQTILSLGNA LNQGTARGSA IGFRLDSLLK LSDIRARNNK MTLMHYLCKV LADKLPGVLD FHNDLVRLEA ASKIQLKILA
1001: EEMQAISKGL EKVEKELTSS DSDGPVSETF CKTLKEFLVV AEADVRSLTS LYSGVGRSAD MLARYFGEDP AHCPFEQVVS TLLDFTRMFE RAHEENCKQL
1101: ELERKKAQKE AEHEKLRHAI HKKGPDHLMQ SRNVSGHTR

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.