Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P25960_001 | Banana | mitochondrion | 11.41 | 80.0 |
| AT3G32400.2 | Thale cress | cytosol | 21.94 | 65.25 |
| Bra007822.1-P | Field mustard | cytosol | 45.18 | 59.48 |
| CDX76779 | Canola | cytosol | 44.97 | 59.27 |
| CDY34742 | Canola | cytosol | 45.11 | 59.13 |
| AT2G25050.1 | Thale cress | cytosol | 45.79 | 57.71 |
| GSMUA_Achr3P04690_001 | Banana | cytosol | 43.68 | 56.45 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 44.16 | 56.33 |
| GSMUA_Achr3P13430_001 | Banana | plasma membrane, plastid | 24.18 | 52.05 |
| KRH05363 | Soybean | cytosol | 48.98 | 49.25 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 41.58 | 46.05 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 37.02 | 41.7 |
| GSMUA_Achr1P25970_001 | Banana | cytosol | 21.06 | 41.55 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 7.34 | 21.64 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 1.83 | 17.65 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 10.33 | 17.16 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 10.33 | 16.34 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 8.83 | 16.23 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 9.58 | 14.72 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 8.15 | 14.71 |
| VIT_17s0000g07570.t01 | Wine grape | nucleus | 8.22 | 14.25 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 7.68 | 13.8 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | ProteinID:CCB46862 | ProteinID:CCB46862.1 |
| ncoils:Coil | UniProt:F6H333 | InterPro:FH2_Formin | EMBL:FN595231 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 |
| PFAM:PF02181 | PFAM:PF10409 | PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF271 | InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF49562 |
| SUPFAM:SSF52799 | TMHMM:TMhelix | InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI0002109801 | ArrayExpress:VIT_04s0008g06530 |
| EnsemblPlantsGene:VIT_04s0008g06530 | EnsemblPlants:VIT_04s0008g06530.t01 | SEG:seg | : | : | : |
Description
Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6H333]
Coordinates
chr4:-:6448272..6495748
Molecular Weight (calculated)
163299.0 Da
IEP (calculated)
6.164
GRAVY (calculated)
-0.374
Length
1472 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKFFYR KPPDGLLEIS ERVYVFDCCF TTDVLEDEEY KVYMGSIVGQ LREHFPDASF MVFNFREGDS QSQISSILSE YDMTVMDYPR HYEGCPLLTM
0101: EMIHHFLRSS ESWLSLGQQN VLLMHCERSG WPILAFMLAA LLIYRKQYTG EQKTLDMIYK QAPRELLQLM SPLNPLPSQL RYLQYVSRRN VGSEWPPLDR
0201: ALTLDCVILR IIPNLDGEGG CRPIFRIYGQ DPFMVADRTP KVLFSTPKRS KTVRHYKQED CELVKIDIHC HIQGDVVLEC ISLEEDMERE EMMFRVMFNT
0301: AFIRSNILML NRDEIDILWN SKDQFPKDFR AEVLFSEMDS GNSLITIDLE GVEEKDGLPM EAFAKVQEIF SNVDWLDPKT DVAFNVLQQI TASNVLQELE
0401: TDSAQSGETV GLLQELSPEK VEDKPKPKAA ENNISSTTSM ALGKQHMTSA KPSVDANLIR RKIDPQELQV ALQRPAQSKI ISQRIPQTPI SNPVSNRKCQ
0501: SSTMNSVVPV GPPPPPPPPS CSGSASSPNI TSTAPPSPPS PGFMPKDSRS NNFPHAPPPP PAPFGKGLSK ASGAQVAGSN GNIPPFPGPP SAQFGGKGRG
0601: LSRAGPKIQA QPKKASLKPY HWLKLTRAMQ GSLWAETQRP EEASKAPEFD MSELESLFST AVPNSENGGV GGKSNRRASG PKSEKVQLID LRRAYNCEIM
0701: LTKVKMPLPD LMQGESAVSA CGGGSTLCPA VIYEAGDAVE GKVGSADGRV REGDGIFLNK LESPAFGPSI GPKGPVHGVS LGLFHLSGSR LGPFKETQEV
0801: LGCDLRPNVS FGEKGEGFGP VGPAAAEGGD LNGEGISSPR ARAQSPEVEK GSGDVDLLVR GEAPSASRPT AKTSSSERQA FIVEDPIVDI LRAASPSEAS
0901: AEPKNGSLTD DALRDEASRY VGLLSPSVGG RETSPSSLFP GIDRAGTKEG VSSGLISEIE GEEQLPLSII LADGNNGEMG SEGERSSSGV GRGDEFEILL
1001: QDLEGRGCRW DDSCLARFSK FLGFSTEGFE EEILNLLLRN KRRREQNVKK DISGSTKFDR ELKKLEWSIN YKGARKEKSL SSVLALDDSA LDVDQVDNLI
1101: KFCPTKEEIE LLKGYNGDKG NLGKCEQFFL ELMKVPRVES KLRVFSFKIQ FRIQVSDLKN NLNVVNSASE EIRNSVKLKR IMQTILSLGN ALNHGTARGS
1201: AIGFRLDSLL KLTDTRARNN KMTLMNYLCK VLAEKLPELL DFPKDLLHLE ASTKIQLKYL AEEMQAISKG LEKVVQELTA SENDGPVSEN FCKTLKEFLV
1301: FAEAEVRSLA SLYSGVGRNA DALALYFGED PARCPFEQVV STLLNFVRMF TRAHEENCKQ LEFERKKAQK EAESEKIKIN HKQESEHLVR TSIKTTKHYR
1401: TDNYTVLREM AELEVKSCSK IHFVRYVGRF CCKNITNSFV FLFYILVCLV SLLYYSFVYI FLKLNRDVNV DK
0101: EMIHHFLRSS ESWLSLGQQN VLLMHCERSG WPILAFMLAA LLIYRKQYTG EQKTLDMIYK QAPRELLQLM SPLNPLPSQL RYLQYVSRRN VGSEWPPLDR
0201: ALTLDCVILR IIPNLDGEGG CRPIFRIYGQ DPFMVADRTP KVLFSTPKRS KTVRHYKQED CELVKIDIHC HIQGDVVLEC ISLEEDMERE EMMFRVMFNT
0301: AFIRSNILML NRDEIDILWN SKDQFPKDFR AEVLFSEMDS GNSLITIDLE GVEEKDGLPM EAFAKVQEIF SNVDWLDPKT DVAFNVLQQI TASNVLQELE
0401: TDSAQSGETV GLLQELSPEK VEDKPKPKAA ENNISSTTSM ALGKQHMTSA KPSVDANLIR RKIDPQELQV ALQRPAQSKI ISQRIPQTPI SNPVSNRKCQ
0501: SSTMNSVVPV GPPPPPPPPS CSGSASSPNI TSTAPPSPPS PGFMPKDSRS NNFPHAPPPP PAPFGKGLSK ASGAQVAGSN GNIPPFPGPP SAQFGGKGRG
0601: LSRAGPKIQA QPKKASLKPY HWLKLTRAMQ GSLWAETQRP EEASKAPEFD MSELESLFST AVPNSENGGV GGKSNRRASG PKSEKVQLID LRRAYNCEIM
0701: LTKVKMPLPD LMQGESAVSA CGGGSTLCPA VIYEAGDAVE GKVGSADGRV REGDGIFLNK LESPAFGPSI GPKGPVHGVS LGLFHLSGSR LGPFKETQEV
0801: LGCDLRPNVS FGEKGEGFGP VGPAAAEGGD LNGEGISSPR ARAQSPEVEK GSGDVDLLVR GEAPSASRPT AKTSSSERQA FIVEDPIVDI LRAASPSEAS
0901: AEPKNGSLTD DALRDEASRY VGLLSPSVGG RETSPSSLFP GIDRAGTKEG VSSGLISEIE GEEQLPLSII LADGNNGEMG SEGERSSSGV GRGDEFEILL
1001: QDLEGRGCRW DDSCLARFSK FLGFSTEGFE EEILNLLLRN KRRREQNVKK DISGSTKFDR ELKKLEWSIN YKGARKEKSL SSVLALDDSA LDVDQVDNLI
1101: KFCPTKEEIE LLKGYNGDKG NLGKCEQFFL ELMKVPRVES KLRVFSFKIQ FRIQVSDLKN NLNVVNSASE EIRNSVKLKR IMQTILSLGN ALNHGTARGS
1201: AIGFRLDSLL KLTDTRARNN KMTLMNYLCK VLAEKLPELL DFPKDLLHLE ASTKIQLKYL AEEMQAISKG LEKVVQELTA SENDGPVSEN FCKTLKEFLV
1301: FAEAEVRSLA SLYSGVGRNA DALALYFGED PARCPFEQVV STLLNFVRMF TRAHEENCKQ LEFERKKAQK EAESEKIKIN HKQESEHLVR TSIKTTKHYR
1401: TDNYTVLREM AELEVKSCSK IHFVRYVGRF CCKNITNSFV FLFYILVCLV SLLYYSFVYI FLKLNRDVNV DK
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Arabidopsis Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.