Factsheet for VIT_14s0060g02330.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18740_001	Banana	nucleus	33.51	62.94
KRG92894	Soybean	endoplasmic reticulum, vacuole	53.34	57.29
KRH33895	Soybean	plasma membrane	53.55	55.82
PGSC0003DMT400063542	Potato	extracellular, golgi, plasma membrane	52.09	55.44
CDY05170	Canola	extracellular, golgi, plasma membrane	43.01	55.3
Solyc01g099650.2.1	Tomato	nucleus	51.98	55.15
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.87	54.82
CDY27766	Canola	golgi, plasma membrane, vacuole	45.41	54.65
KRG96818	Soybean	plasma membrane	44.99	54.49
KRH68527	Soybean	plasma membrane	43.63	52.58
CDX74146	Canola	extracellular, golgi, plasma membrane	43.53	51.93
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	44.47	51.76
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.05	51.65
AT3G05470.1	Thale cress	extracellular, golgi, plasma membrane	46.97	50.91
Os04t0461800-01	Rice	extracellular	37.79	43.46
TraesCS2B01G344200.1	Wheat	golgi	37.89	43.37
TraesCS2D01G325200.1	Wheat	golgi, mitochondrion	38.0	43.23
Zm00001d003406_P002	Maize	plasma membrane	37.06	42.21
EES12298	Sorghum	plasma membrane	37.27	41.9
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	21.19	40.68
TraesCS2A01G337800.1	Wheat	mitochondrion, plasma membrane	38.0	40.09
EES13879	Sorghum	golgi	35.91	37.89
Zm00001d032225_P001	Maize	golgi	34.76	37.33
VIT_00s0227g00200.t01	Wine grape	cytosol	5.64	35.29
Os08t0431200-00	Rice	cytosol	19.1	35.19
VIT_07s0129g00220.t01	Wine grape	endoplasmic reticulum, extracellular	30.27	32.73
VIT_12s0059g02680.t01	Wine grape	golgi	25.78	30.84
VIT_05s0094g00920.t01	Wine grape	nucleus	29.12	30.0
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	22.76	26.72
VIT_17s0000g07570.t01	Wine grape	nucleus	22.76	25.68
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	21.71	25.4
VIT_11s0016g00160.t01	Wine grape	cytosol	15.97	13.26
VIT_02s0033g01360.t01	Wine grape	cytosol, nucleus, plasma membrane	17.22	12.62
VIT_17s0000g06640.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	16.18	11.66
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	14.72	9.58

Protein Annotations

Gene3D:1.20.58.2220	EntrezGene:100240767	wikigene:100240767	MapMan:20.2.2.6.1	ProteinID:CCB61853	ProteinID:CCB61853.1
ncoils:Coil	UniProt:F6I4L6	InterPro:FH2_Formin	EMBL:FN596746	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR015425	EntrezGene:LOC100240767	wikigene:LOC100240767	PFAM:PF02181	PFscan:PS51444
PANTHER:PTHR23213	PANTHER:PTHR23213:SF177	SMART:SM00498	SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00021099A1	ArrayExpress:VIT_14s0060g02330	EnsemblPlantsGene:VIT_14s0060g02330	EnsemblPlants:VIT_14s0060g02330.t01	RefSeq:XP_002279574	RefSeq:XP_002279574.2
SEG:seg	:	:	:	:	:

Description

Formin-like protein [Source:UniProtKB/TrEMBL;Acc:F6I4L6]

Coordinates

chr14:+:1915242..1918900

Molecular Weight (calculated)

104822.0 Da

IEP (calculated)

8.739

GRAVY (calculated)

-0.506

Length

958 amino acids

Sequence
(BLAST)

001: MGSGLKILHM ISIIISILIS FQSARILIPA VSSAAVLNAE ENYFNAVDGL KSLHFIEDNT TDGKEQIEKV SGEDDNAEKE PLILEKFRVL LGLKSFKARR
101: TRYNGELENC SPSPSPSPSL EDEAEAPAPV PAPPLHAHSH PPHHPKQIPP AHRAHRERRG KGRVKKIIVA VLVSTGATSV ICVLGFIWFC LKFRKPRKRS
201: ARTVTIHGKE KGSRGRSNNG TASKVSINPG LDLFYLDSIE SSLEPQGTCL KQSSQTPNIS TTNQNSISPT LLESEGLGHR QLRKSESGHV SYASGEGIVS
301: VHGDAESGDD HSNGGGSSCR KKNVSIEAHF SDDDDESFHS FCESHSSNVR LSNASAGSFR DAAEVFSPNV YKIQPSLPSS SNLPIPPATP DLIPAPAPNI
401: GSFPPPISTK NPKQEASCSS ESCQKDLPPP PPPPPPPPRP PQFSPSPSFS TTRLSSKASC SYTLANFSSP RNSDSSSGSN QTPQRDLQPP SHKPPNPPPP
501: PGGIPPPPCP PPFLRVNSNS LKTPPPPPSQ LSQFIPLGKD GAPLPKLKPL HWDKVRAAPN RSTVWDKLRS SSFELDEKMI ESLFGYNLQT TMKNDEAKSK
601: SPSPSKHVLE PKRLQNITIL SKALNATAVQ VCDALQQGDG LCLQQLEALA KMVPTDEEEA KLSSYNGDIN ELGSAERFVK AMLDIPFAFL RIEAMLYKET
701: FEDEVVHLRK SFSMLEEACK ELRSSRLFLK LLEAVLKTGN RMNVGTIRGG ARAFKLDALL KLSDVKGTDG KTTLLHFVVQ EMIRTEGIKA SESIIGKINL
801: KTKNKTVEER EEGYRRMGLD LVSGLSTELC NVKKTATVDM DVLASSVSNL SDGKRKLQNL VNNDLGNDQR SRNFVGSMKS FLGHAEKNLK ELQEDENRVL
901: LQVREITEYF HGDVSKDEAN PLRIFVIVRD FLGMLDHICK ELRSAKIPRS PNPLSPFR

Best Arabidopsis Sequence Match ( AT3G05470.1 )
(BLAST)

001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR

Arabidopsis Description

FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.