Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 92.53 | 94.15 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 74.91 | 82.15 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 79.56 | 81.66 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 82.5 | 76.24 |
| GSMUA_Achr7P18740_001 | Banana | nucleus | 37.21 | 59.61 |
| CDX94358 | Canola | mitochondrion, plastid | 8.94 | 46.79 |
| KRG96818 | Soybean | plasma membrane | 45.29 | 46.78 |
| KRG92894 | Soybean | endoplasmic reticulum, vacuole | 50.55 | 46.3 |
| KRH68527 | Soybean | plasma membrane | 44.55 | 45.79 |
| KRH33895 | Soybean | plasma membrane | 50.55 | 44.94 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 48.71 | 44.22 |
| Solyc01g099650.2.1 | Tomato | nucleus | 48.84 | 44.19 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 51.65 | 44.05 |
| Os04t0461800-01 | Rice | extracellular | 42.72 | 41.9 |
| TraesCS2B01G344200.1 | Wheat | golgi | 41.62 | 40.62 |
| EES12298 | Sorghum | plasma membrane | 42.11 | 40.38 |
| TraesCS2D01G325200.1 | Wheat | golgi, mitochondrion | 41.49 | 40.26 |
| Zm00001d003406_P002 | Maize | plasma membrane | 41.0 | 39.83 |
| TraesCS2A01G337800.1 | Wheat | mitochondrion, plasma membrane | 41.74 | 37.56 |
| CDY37849 | Canola | endoplasmic reticulum | 22.4 | 34.86 |
| Zm00001d032225_P001 | Maize | golgi | 35.37 | 32.4 |
| EES13879 | Sorghum | golgi | 35.62 | 32.05 |
| CDY70125 | Canola | cytosol | 18.73 | 31.88 |
| CDY08720 | Canola | mitochondrion | 27.91 | 31.36 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 31.58 | 30.71 |
| Os08t0431200-00 | Rice | cytosol | 18.73 | 29.42 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 31.46 | 28.49 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 29.01 | 28.11 |
| CDY44259 | Canola | plasma membrane, vacuole | 29.01 | 28.11 |
| CDY22934 | Canola | nucleus, plastid | 24.97 | 27.98 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 27.05 | 27.83 |
| CDY17909 | Canola | golgi, vacuole | 28.52 | 27.48 |
| CDY42470 | Canola | plasma membrane | 28.76 | 27.36 |
| CDY43811 | Canola | golgi | 28.4 | 27.2 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.32 | 26.98 |
| CDY18346 | Canola | plasma membrane | 28.52 | 26.72 |
| CDY43029 | Canola | plasma membrane | 28.15 | 26.65 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 25.7 | 26.28 |
| CDY53556 | Canola | nucleus | 26.44 | 25.56 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.87 | 25.13 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 31.95 | 24.65 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 32.07 | 24.35 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 23.38 | 24.12 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 18.48 | 24.04 |
| CDY31597 | Canola | mitochondrion | 18.48 | 23.74 |
| CDY55061 | Canola | mitochondrion, nucleus | 21.42 | 23.52 |
| CDY16239 | Canola | vacuole | 20.07 | 23.36 |
| CDY35941 | Canola | plastid | 21.3 | 23.23 |
| CDY28040 | Canola | plastid | 21.66 | 22.99 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 19.71 | 22.3 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 21.91 | 22.18 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 19.34 | 22.16 |
| CDX85333 | Canola | plasma membrane | 22.28 | 22.11 |
| CDY24501 | Canola | mitochondrion, nucleus | 21.42 | 21.63 |
| CDY33614 | Canola | mitochondrion, nucleus | 19.95 | 21.17 |
| CDY27130 | Canola | cytosol, mitochondrion | 9.67 | 20.1 |
| CDY12361 | Canola | cytosol | 18.24 | 13.28 |
| CDY49153 | Canola | cytosol | 16.16 | 12.6 |
| CDX76779 | Canola | cytosol | 17.14 | 12.53 |
| CDY34742 | Canola | cytosol | 17.01 | 12.38 |
| CDY12294 | Canola | cytosol | 18.12 | 12.14 |
| CDY02799 | Canola | cytosol | 17.87 | 11.67 |
| CDX99025 | Canola | cytosol | 16.65 | 11.66 |
| CDX69994 | Canola | plastid | 16.77 | 11.54 |
| CDY14029 | Canola | cytosol | 17.14 | 11.37 |
| CDY62689 | Canola | cytosol | 17.75 | 11.22 |
| CDY32721 | Canola | cytosol | 16.89 | 11.09 |
| CDY40774 | Canola | cytosol | 12.61 | 11.06 |
| CDX69993 | Canola | cytosol | 15.54 | 10.47 |
| CDY43877 | Canola | cytosol | 16.52 | 10.24 |
| CDX99026 | Canola | cytosol | 15.79 | 10.15 |
| CDX78309 | Canola | nucleus | 17.75 | 9.69 |
| CDX81069 | Canola | nucleus | 17.01 | 9.57 |
| CDY02798 | Canola | cytosol | 4.65 | 7.76 |
| CDX69992 | Canola | cytosol | 7.1 | 7.66 |
| CDX99027 | Canola | nucleus | 3.43 | 3.24 |
| CDX99029 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | GO:A0A078HTQ7 | UniProt:A0A078HTQ7 | EnsemblPlants:CDY40709 | ProteinID:CDY40709 |
| ProteinID:CDY40709.1 | InterPro:FH2_Formin | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00071600001 |
| InterPro:IPR015425 | PFAM:PF02181 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF177 | SMART:SM00498 |
| SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF4329 | SEG:seg | : |
Description
BnaC03g34250DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTQ7]
Coordinates
chrLK032477:-:262676..265466
Molecular Weight (calculated)
90284.2 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.478
Length
817 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHFHQILLM IIVVVTSLQC CRVSFCSIYA NAKEFDDWKA LVVEDGERYR TEIGKLVGED GGEKKKFPVL EKFRALLDLI KPSTLRRRSL ATSASLAPWS
101: APSPSPFPNG GPAESPAYSP APQRPIPPHL RRPLPHRTHH PSRQHEVQRR KHENRGAFIH VVVSAACGIG FVVCVVGAFC LYARRRKKNG KTPSFQSSTR
201: KVSINPSHSL GDDLEKQSSV SVKEVRETEK DVNDNKGVLL EEDVKTSVET EILSDSDNAS SYSTKEIVSV HENNDDEQTV DSVSGPVVSN GCDSSDDNES
301: FHSVGGGSSV GSSQRFSERE ISPPPPPPPP PPPLPPLSNR GLHTLSLPKT TTLSSQLTAK VCASSSGPTL PSTPPPLRPP PPPPLRPPPP PPPPSQQPQA
401: TNKTPPPPLS LDFSQRRPLG KNGAPLPKLK PLHWDKVRAT PNRTMVWDRL RASSFEFDEE MIESLFGYTM QSSTKNEEGK CKTPSPGKHL LEPKRLQNFT
501: ILLKALNANA DQICSALGKG EGLCLQQLEA LVKMVPTKEE ELKLCSYKGE VDELGSAEKF LRAVVGVPFA FQRAEAMLYR ETFEDEVVHL RNSFSMLEEA
601: CKELKSSRLF LKLLEAVLKT GNRMNVGTIR GGAKAFKLDA LLKLSDVKGT DGKTTLLHFV VQEISRSEGI RDYRRMGLDL VSGLNTELRN VKKTATIDME
701: GLVSSVSNLR DGLGGLKCLA SEKLKGDEDN RAFGSSMSSF LRYGERRLEE LREDEKKVME RVGEIAEYFH GDVRGDEKNP LRIFVIVRDF LGMLDLVCRE
801: LRCVRVPNSP SPLAPFR
101: APSPSPFPNG GPAESPAYSP APQRPIPPHL RRPLPHRTHH PSRQHEVQRR KHENRGAFIH VVVSAACGIG FVVCVVGAFC LYARRRKKNG KTPSFQSSTR
201: KVSINPSHSL GDDLEKQSSV SVKEVRETEK DVNDNKGVLL EEDVKTSVET EILSDSDNAS SYSTKEIVSV HENNDDEQTV DSVSGPVVSN GCDSSDDNES
301: FHSVGGGSSV GSSQRFSERE ISPPPPPPPP PPPLPPLSNR GLHTLSLPKT TTLSSQLTAK VCASSSGPTL PSTPPPLRPP PPPPLRPPPP PPPPSQQPQA
401: TNKTPPPPLS LDFSQRRPLG KNGAPLPKLK PLHWDKVRAT PNRTMVWDRL RASSFEFDEE MIESLFGYTM QSSTKNEEGK CKTPSPGKHL LEPKRLQNFT
501: ILLKALNANA DQICSALGKG EGLCLQQLEA LVKMVPTKEE ELKLCSYKGE VDELGSAEKF LRAVVGVPFA FQRAEAMLYR ETFEDEVVHL RNSFSMLEEA
601: CKELKSSRLF LKLLEAVLKT GNRMNVGTIR GGAKAFKLDA LLKLSDVKGT DGKTTLLHFV VQEISRSEGI RDYRRMGLDL VSGLNTELRN VKKTATIDME
701: GLVSSVSNLR DGLGGLKCLA SEKLKGDEDN RAFGSSMSSF LRYGERRLEE LREDEKKVME RVGEIAEYFH GDVRGDEKNP LRIFVIVRDF LGMLDLVCRE
801: LRCVRVPNSP SPLAPFR
001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
Arabidopsis Description
FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [extracellular,golgi,plasma membrane]
SUBAcon: [extracellular,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.