Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02798 | Canola | cytosol | 62.5 | 2.04 |
| CDX69992 | Canola | cytosol | 75.0 | 1.59 |
| CDY40774 | Canola | cytosol | 87.5 | 1.5 |
| EER87977 | Sorghum | cytosol | 50.0 | 1.49 |
| CDX99027 | Canola | nucleus | 75.0 | 1.39 |
| Zm00001d045102_P001 | Maize | cytosol | 50.0 | 1.24 |
| CDX99025 | Canola | cytosol | 81.25 | 1.11 |
| CDX69994 | Canola | plastid | 81.25 | 1.1 |
| CDY14029 | Canola | cytosol | 81.25 | 1.06 |
| CDX69993 | Canola | cytosol | 75.0 | 0.99 |
| CDX81069 | Canola | nucleus | 87.5 | 0.96 |
| CDX99026 | Canola | cytosol | 75.0 | 0.94 |
| CDX78309 | Canola | nucleus | 87.5 | 0.94 |
| CDY49153 | Canola | cytosol | 56.25 | 0.86 |
| CDY32721 | Canola | cytosol | 62.5 | 0.8 |
| CDY02799 | Canola | cytosol | 62.5 | 0.8 |
| CDY62689 | Canola | cytosol | 62.5 | 0.77 |
| CDY43877 | Canola | cytosol | 62.5 | 0.76 |
| CDY12294 | Canola | cytosol | 56.25 | 0.74 |
| CDX76779 | Canola | cytosol | 50.0 | 0.72 |
| CDY12361 | Canola | cytosol | 50.0 | 0.71 |
| CDY34742 | Canola | cytosol | 50.0 | 0.71 |
| TraesCS4A01G061100.1 | Wheat | mitochondrion | 25.0 | 0.44 |
| TraesCS4B01G236500.1 | Wheat | mitochondrion | 25.0 | 0.44 |
| TraesCS4D01G237900.1 | Wheat | plastid | 25.0 | 0.44 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 18.75 | 0.38 |
| CDY17909 | Canola | golgi, vacuole | 18.75 | 0.35 |
| CDY16239 | Canola | vacuole | 12.5 | 0.28 |
| CDY08720 | Canola | mitochondrion | 12.5 | 0.28 |
| CDY22934 | Canola | nucleus, plastid | 12.5 | 0.27 |
| CDY35941 | Canola | plastid | 12.5 | 0.27 |
| CDY28040 | Canola | plastid | 12.5 | 0.26 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 12.5 | 0.25 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 12.5 | 0.25 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 12.5 | 0.25 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 12.5 | 0.24 |
| CDY44259 | Canola | plasma membrane, vacuole | 12.5 | 0.24 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 12.5 | 0.24 |
| CDY53556 | Canola | nucleus | 12.5 | 0.24 |
| CDY43811 | Canola | golgi | 12.5 | 0.23 |
| CDY42470 | Canola | plasma membrane | 12.5 | 0.23 |
| CDY43029 | Canola | plasma membrane | 12.5 | 0.23 |
| CDY18346 | Canola | plasma membrane | 12.5 | 0.23 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 12.5 | 0.22 |
| CDY37849 | Canola | endoplasmic reticulum | 6.25 | 0.19 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 6.25 | 0.16 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 6.25 | 0.14 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 6.25 | 0.14 |
| CDY55061 | Canola | mitochondrion, nucleus | 6.25 | 0.13 |
| CDY33614 | Canola | mitochondrion, nucleus | 6.25 | 0.13 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 6.25 | 0.13 |
| CDY24501 | Canola | mitochondrion, nucleus | 6.25 | 0.12 |
| CDX85333 | Canola | plasma membrane | 6.25 | 0.12 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 6.25 | 0.09 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 6.25 | 0.09 |
| CDY70125 | Canola | cytosol | 0.0 | 0.0 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 0.0 | 0.0 |
| CDY31597 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY27130 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 0.0 | 0.0 |
| CDX94358 | Canola | mitochondrion, plastid | 0.0 | 0.0 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99029 | EnsemblPlantsGene:GSBRNA2T00107157001 | ProteinID:CDX99029 | ProteinID:CDX99029.1 | UniParc:UPI0004EF2307 | MapMan:35.2 |
Description
BnaC09g48060D
Coordinates
chrLK031907:+:1214218..1214268
Molecular Weight (calculated)
2015.4 Da
IEP (calculated)
4.063
GRAVY (calculated)
-1.019
Length
16 amino acids
Sequence
(BLAST)
(BLAST)
1: MDMLWDAKDQ FPKEFN
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
Arabidopsis Description
actin binding [Source:TAIR;Acc:AT5G07740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.