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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400067386 Potato cytosol 50.64 22.77
Bra039561.1-P Field mustard golgi 81.41 15.17
CDY22934 Canola nucleus, plastid 68.59 14.68
GSMUA_Achr8P07370_001 Banana endoplasmic reticulum, golgi 44.23 13.88
CDY53556 Canola nucleus 67.95 12.54
CDY70125 Canola cytosol 37.82 12.29
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 61.54 12.05
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 60.9 11.89
VIT_12s0059g02680.t01 Wine grape golgi 58.97 11.49
CDY37849 Canola endoplasmic reticulum 37.82 11.24
GSMUA_Achr3P23040_001 Banana cytosol, mitochondrion, plastid 46.15 11.09
KRH25436 Soybean endoplasmic reticulum, golgi, vacuole 56.41 10.6
KRH56076 Soybean endoplasmic reticulum 55.77 10.33
CDY05170 Canola extracellular, golgi, plasma membrane 48.72 10.2
CDY18346 Canola plasma membrane 55.77 9.98
CDY43029 Canola plasma membrane 55.13 9.97
CDY43811 Canola golgi 54.49 9.96
CDY42470 Canola plasma membrane 52.56 9.55
CDY27766 Canola golgi, plasma membrane, vacuole 48.08 9.42
PGSC0003DMT400036332 Potato plasma membrane 55.13 9.32
Solyc05g046120.2.1 Tomato plasma membrane 54.49 9.26
Os04t0100300-00 Rice plasma membrane 48.72 9.23
GSMUA_Achr2P14090_001 Banana mitochondrion 39.1 9.17
Os07t0545500-01 Rice plasma membrane 54.49 9.15
EES04559 Sorghum plasma membrane 50.0 9.13
CDX74146 Canola extracellular, golgi, plasma membrane 46.79 9.09
HORVU0Hr1G015390.6 Barley cytosol, plasma membrane, plastid 48.72 9.09
TraesCS6B01G163200.1 Wheat plasma membrane 48.72 9.0
Os02t0161100-01 Rice golgi 50.64 8.97
CDY31597 Canola mitochondrion 36.54 8.96
TraesCS6A01G135200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.72 8.94
TraesCS6D01G124300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.72 8.94
CDY40709 Canola endoplasmic reticulum, plasma membrane, vacuole 46.79 8.94
EER99497 Sorghum endoplasmic reticulum, plasma membrane, vacuole 51.92 8.93
CDY08720 Canola mitochondrion 41.03 8.8
TraesCS2A01G214500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 52.56 8.67
Zm00001d004557_P002 Maize golgi, plasma membrane, vacuole 51.92 8.56
CDX83457 Canola golgi, plasma membrane, vacuole 46.15 8.54
TraesCS2B01G239500.1 Wheat plasma membrane 51.28 8.5
Solyc07g052730.2.1 Tomato golgi 51.92 8.48
TraesCS2D01G220300.1 Wheat plasma membrane 51.92 8.46
CDX79799 Canola mitochondrion, plastid, vacuole 42.95 8.44
EES10325 Sorghum golgi 51.92 8.4
CDY44259 Canola plasma membrane, vacuole 44.87 8.3
Zm00001d006549_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 48.72 8.24
CDY27130 Canola cytosol, mitochondrion 20.51 8.14
Zm00001d024947_P005 Maize plasma membrane 51.92 8.08
HORVU2Hr1G043830.5 Barley cytosol, nucleus, plastid 52.56 7.98
CDY55061 Canola mitochondrion, nucleus 37.82 7.93
CDY17909 Canola golgi, vacuole 42.95 7.9
TraesCS2A01G044700.1 Wheat extracellular, plasma membrane 52.56 7.9
TraesCS2B01G056800.1 Wheat extracellular, plasma membrane 52.56 7.82
CDY38795 Canola endoplasmic reticulum, golgi, plasma membrane 31.41 7.8
TraesCS2D01G043300.1 Wheat extracellular, plasma membrane 51.28 7.8
CDY11614 Canola endoplasmic reticulum, plasma membrane, vacuole 38.46 7.73
CDY14670 Canola endoplasmic reticulum, golgi, vacuole 39.1 7.7
CDY33614 Canola mitochondrion, nucleus 37.82 7.66
CDY43578 Canola endoplasmic reticulum, extracellular 41.03 7.62
Zm00001d015326_P003 Maize mitochondrion, plastid 48.72 7.51
CDY24501 Canola mitochondrion, nucleus 37.82 7.29
CDY36494 Canola endoplasmic reticulum, vacuole 41.03 7.1
CDY15092 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 46.15 6.8
CDY52291 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 46.15 6.69
CDX85333 Canola plasma membrane 33.33 6.32
CDX86310 Canola endoplasmic reticulum, plasma membrane 31.41 6.07
CDY28040 Canola plastid 29.49 5.97
CDY35941 Canola plastid 28.21 5.87
CDX74041 Canola golgi, plasma membrane, plastid 26.28 5.75
CDY07990 Canola golgi, plasma membrane, plastid 26.28 5.68
CDY16239 Canola vacuole 22.44 4.99
CDY49153 Canola cytosol 23.72 3.53
CDY40774 Canola cytosol 19.87 3.33
CDY12361 Canola cytosol 23.08 3.21
CDY12294 Canola cytosol 23.08 2.95
CDX99025 Canola cytosol 21.79 2.92
CDX69994 Canola plastid 21.79 2.86
CDY32721 Canola cytosol 21.15 2.65
CDX69993 Canola cytosol 20.51 2.64
CDY02799 Canola cytosol 21.15 2.64
CDY62689 Canola cytosol 21.79 2.63
CDY43877 Canola cytosol 21.79 2.58
CDY14029 Canola cytosol 19.87 2.52
CDX99026 Canola cytosol 20.51 2.52
CDX76779 Canola cytosol 16.67 2.33
CDY34742 Canola cytosol 16.67 2.32
CDX81069 Canola nucleus 19.87 2.13
CDX78309 Canola nucleus 19.23 2.0
AT4G15200.2 Thale cress extracellular, golgi, plasma membrane 3.21 1.07
CDX69992 Canola cytosol 4.49 0.92
HORVU2Hr1G006690.1 Barley peroxisome 0.64 0.11
CDX99027 Canola nucleus 0.0 0.0
CDX99029 Canola cytosol 0.0 0.0
CDY02798 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDX94358EnsemblPlantsGene:GSBRNA2T00157473001Gene3D:1.20.58.2220InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213
PANTHER:PTHR23213:SF195PFAM:PF02181PFscan:PS51444ProteinID:CDX94358ProteinID:CDX94358.1SUPFAM:SSF101447
UniParc:UPI0004EEFC3CMapMan:20.2.2.6.1::::
Description
BnaC01g18260D
Coordinates
chrLK031881:-:451302..451927
Molecular Weight (calculated)
17391.0 Da
IEP (calculated)
10.759
GRAVY (calculated)
-0.420
Length
156 amino acids
Sequence
(BLAST)
001: MSFCSLLSLS KVACKKLKKQ HTVPKLLETV LKTGNIMNVG TSRGDAQSFK LDTFLKLSNV KGTDGKTTLL HFVVREIIRS EGVRTLRLQR SSKSFSSVKT
101: DDSNTDISPQ SVERYRSRGL QVVSGLTTEL EDVKRAAIID TDGLASRQPK RLTYER
Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)
001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD
Arabidopsis Description
FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [extracellular,nucleus,plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.