Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 95.5 | 94.82 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 95.26 | 94.59 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 84.24 | 85.05 |
| Os02t0161100-01 | Rice | golgi | 73.93 | 70.83 |
| EES04559 | Sorghum | plasma membrane | 69.08 | 68.27 |
| PGSC0003DMT400083315 | Potato | cytosol | 14.34 | 65.05 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 68.48 | 57.11 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 18.25 | 53.85 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 31.75 | 53.71 |
| PGSC0003DMT400067386 | Potato | cytosol | 21.68 | 52.74 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 29.74 | 50.5 |
| CDX94358 | Canola | mitochondrion, plastid | 9.0 | 48.72 |
| PGSC0003DMT400039073 | Potato | cytosol | 15.52 | 48.52 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 34.12 | 44.38 |
| PGSC0003DMT400031544 | Potato | cytosol | 22.75 | 42.29 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 36.37 | 38.33 |
| Bra029012.1-P | Field mustard | plasma membrane | 37.44 | 36.79 |
| CDY43811 | Canola | golgi | 37.09 | 36.69 |
| CDY43029 | Canola | plasma membrane | 37.32 | 36.5 |
| CDY22934 | Canola | nucleus, plastid | 31.28 | 36.21 |
| CDY42470 | Canola | plasma membrane | 36.61 | 35.97 |
| CDY18346 | Canola | plasma membrane | 36.61 | 35.44 |
| Bra002969.1-P | Field mustard | plasma membrane | 36.73 | 35.35 |
| Bra037087.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 34.12 | 35.29 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 37.44 | 35.11 |
| KRH25436 | Soybean | endoplasmic reticulum, golgi, vacuole | 34.48 | 35.06 |
| Solyc10g006540.2.1 | Tomato | extracellular | 38.63 | 34.94 |
| Bra039561.1-P | Field mustard | golgi | 34.6 | 34.89 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.82 | 34.76 |
| KRH56076 | Soybean | endoplasmic reticulum | 34.6 | 34.68 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.23 | 34.04 |
| Solyc05g046120.2.1 | Tomato | plasma membrane | 36.85 | 33.88 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 36.97 | 33.8 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 34.83 | 33.75 |
| KRH27118 | Soybean | plasma membrane | 35.43 | 33.11 |
| KRH22219 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 35.43 | 32.97 |
| CDY53556 | Canola | nucleus | 32.94 | 32.9 |
| Solyc07g064010.2.1 | Tomato | golgi | 34.48 | 32.73 |
| Solyc07g052730.2.1 | Tomato | golgi | 36.26 | 32.04 |
| KRH25896 | Soybean | plasma membrane | 35.9 | 31.14 |
| KRH55607 | Soybean | plasma membrane | 35.9 | 30.98 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 34.12 | 30.61 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 15.4 | 27.9 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 33.65 | 27.1 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 25.24 | 27.06 |
| TraesCS1B01G059400.1 | Wheat | plastid | 17.89 | 26.82 |
| TraesCS4B01G257800.1 | Wheat | plasma membrane | 27.01 | 25.53 |
| TraesCS2B01G344200.1 | Wheat | golgi | 24.76 | 24.97 |
| TraesCS2B01G213200.1 | Wheat | plasma membrane | 22.99 | 24.78 |
| TraesCS1B01G340800.1 | Wheat | mitochondrion | 23.34 | 23.62 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 26.18 | 23.17 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 23.34 | 21.86 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 20.26 | 20.38 |
| TraesCS2B01G209600.1 | Wheat | cytosol | 9.72 | 20.1 |
| TraesCS2B01G406800.1 | Wheat | cytosol | 15.52 | 14.06 |
| TraesCS1B01G094200.1 | Wheat | cytosol | 17.89 | 10.76 |
| TraesCS6B01G389300.1 | Wheat | cytosol | 15.17 | 9.58 |
| TraesCS4B01G236500.1 | Wheat | mitochondrion | 9.95 | 9.32 |
| TraesCS2B01G209500.1 | Wheat | cytosol | 2.96 | 7.04 |
| TraesCS7B01G051900.1 | Wheat | mitochondrion | 3.91 | 5.46 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G163200.1 | EnsemblPlantsGene:TraesCS6B01G163200 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF235 | PFAM:PF02181 | PFscan:PS51444 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00498 | SUPFAM:SSF101447 | MapMan:20.2.2.6.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:169320725..169324009
Molecular Weight (calculated)
92120.5 Da
IEP (calculated)
6.731
GRAVY (calculated)
-0.396
Length
844 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGRMGLLVL FVAAVLVAPS RGGGEVDGVH VSSAWTRPAS SSSTSAPPSS LVLDGDLVDK IRSICLQDVV GAEETFAYDE PPSHSSKGEL KTMLLMELLA
101: LLPPDKSSVT HDCIRANYFS LGMSQEFINY LEDQQFLPGS NFYPRRRHLA DRMVGGAPSS GGQAPFPLSL TEQPFTPPNS PNTEPRSRHL EDRPAKKRRG
201: VPPPVSPSDK QHNYIKLVLT VVLPTAAFSF IAAFLIFYCC GCNKSKVSVG EPRDDHPLLH MQLANTPGSS PVIRASSSQL HKDDPGVRTS KAGGSMSRCF
301: PCCFKTSTDV STPPQATGGT QNNTSDAPKP MPPPPPPPPP PPPPPPVRKA GPPPPAPPKG SLARFPQMSP VESSHSEGSS ASEQASESSE AEVGAPRPKL
401: RPFYWNKVLA NPNQSMAWHD IKFGSFHVNE DMIEALFGYG AGNRNNTKDK ELAMADPSPQ HVSLLDFKKS CNLAVVFKAM NVRVEDIQDA LLEGNELPRL
501: LLETILRMKP NDEEELKLRL YDGDYSQLGL AEQVMKALTD IPFAYKRISA LLFMSSLQED ASSLRDSFLQ LEAACGELKH RLFLKLLEAV LKTGNRLNDG
601: TFRGGANAFK LDTLLKLSDV KGADGKTTLL HFVVQEIIRS EGVRKARLAM ESERTQPSGD DSNGSVQEDG EYYSKLGLKI VSGLSSELVN AKNIAALDAD
701: ALSASVLQLR RELLNTKEFL NSDMATIDEN SGFHRSLVRF VEHAENETNF LLKEEKRLRS LVKKTIRYFH GNDVKDDGFS LFVIVRDFLV MLDKACKEVG
801: ASQKKAASQS RSSGSCNPAS QLNPQEKQFP AVLDDHLDSS DSND
101: LLPPDKSSVT HDCIRANYFS LGMSQEFINY LEDQQFLPGS NFYPRRRHLA DRMVGGAPSS GGQAPFPLSL TEQPFTPPNS PNTEPRSRHL EDRPAKKRRG
201: VPPPVSPSDK QHNYIKLVLT VVLPTAAFSF IAAFLIFYCC GCNKSKVSVG EPRDDHPLLH MQLANTPGSS PVIRASSSQL HKDDPGVRTS KAGGSMSRCF
301: PCCFKTSTDV STPPQATGGT QNNTSDAPKP MPPPPPPPPP PPPPPPVRKA GPPPPAPPKG SLARFPQMSP VESSHSEGSS ASEQASESSE AEVGAPRPKL
401: RPFYWNKVLA NPNQSMAWHD IKFGSFHVNE DMIEALFGYG AGNRNNTKDK ELAMADPSPQ HVSLLDFKKS CNLAVVFKAM NVRVEDIQDA LLEGNELPRL
501: LLETILRMKP NDEEELKLRL YDGDYSQLGL AEQVMKALTD IPFAYKRISA LLFMSSLQED ASSLRDSFLQ LEAACGELKH RLFLKLLEAV LKTGNRLNDG
601: TFRGGANAFK LDTLLKLSDV KGADGKTTLL HFVVQEIIRS EGVRKARLAM ESERTQPSGD DSNGSVQEDG EYYSKLGLKI VSGLSSELVN AKNIAALDAD
701: ALSASVLQLR RELLNTKEFL NSDMATIDEN SGFHRSLVRF VEHAENETNF LLKEEKRLRS LVKKTIRYFH GNDVKDDGFS LFVIVRDFLV MLDKACKEVG
801: ASQKKAASQS RSSGSCNPAS QLNPQEKQFP AVLDDHLDSS DSND
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.