Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083315 | Potato | cytosol | 56.67 | 82.26 |
| PGSC0003DMT400067386 | Potato | cytosol | 48.89 | 38.04 |
| PGSC0003DMT400031544 | Potato | cytosol | 62.22 | 37.0 |
| PGSC0003DMT400036575 | Potato | mitochondrion | 38.15 | 36.01 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 58.89 | 31.86 |
| GSMUA_Achr8P07370_001 | Banana | endoplasmic reticulum, golgi | 48.52 | 26.36 |
| Solyc10g006540.2.1 | Tomato | extracellular | 84.07 | 24.33 |
| GSMUA_Achr3P23040_001 | Banana | cytosol, mitochondrion, plastid | 53.7 | 22.34 |
| PGSC0003DMT400056393 | Potato | cytosol | 39.26 | 22.08 |
| GSMUA_Achr2P14090_001 | Banana | mitochondrion | 50.37 | 20.45 |
| PGSC0003DMT400049488 | Potato | golgi, plasma membrane, vacuole | 65.56 | 20.32 |
| CDY43811 | Canola | golgi | 56.3 | 17.82 |
| CDY42470 | Canola | plasma membrane | 56.67 | 17.81 |
| Bra002969.1-P | Field mustard | plasma membrane | 57.78 | 17.79 |
| CDY18346 | Canola | plasma membrane | 57.41 | 17.78 |
| CDY43029 | Canola | plasma membrane | 56.3 | 17.61 |
| Bra029012.1-P | Field mustard | plasma membrane | 55.56 | 17.46 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 57.78 | 17.33 |
| PGSC0003DMT400063143 | Potato | cytosol | 19.63 | 16.88 |
| PGSC0003DMT400036332 | Potato | plasma membrane | 57.04 | 16.68 |
| KRH25896 | Soybean | plasma membrane | 60.0 | 16.65 |
| KRH27118 | Soybean | plasma membrane | 55.19 | 16.5 |
| KRH22219 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 54.07 | 16.1 |
| KRH55607 | Soybean | plasma membrane | 58.15 | 16.05 |
| EES04559 | Sorghum | plasma membrane | 50.37 | 15.93 |
| HORVU0Hr1G015390.6 | Barley | cytosol, plasma membrane, plastid | 48.52 | 15.67 |
| TraesCS6B01G163200.1 | Wheat | plasma membrane | 48.52 | 15.52 |
| Os02t0161100-01 | Rice | golgi | 50.37 | 15.44 |
| EER99497 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 51.85 | 15.44 |
| TraesCS6A01G135200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 48.52 | 15.41 |
| TraesCS6D01G124300.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 48.15 | 15.29 |
| Os04t0100300-00 | Rice | plasma membrane | 44.81 | 14.7 |
| Os07t0545500-01 | Rice | plasma membrane | 50.37 | 14.64 |
| PGSC0003DMT400029052 | Potato | cytosol | 14.81 | 14.49 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 40.37 | 14.44 |
| Zm00001d006549_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 48.89 | 14.32 |
| TraesCS2A01G214500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 14.27 |
| Zm00001d004557_P002 | Maize | golgi, plasma membrane, vacuole | 50.0 | 14.27 |
| TraesCS2B01G239500.1 | Wheat | plasma membrane | 49.26 | 14.13 |
| EES10325 | Sorghum | golgi | 50.0 | 14.0 |
| TraesCS2D01G220300.1 | Wheat | plasma membrane | 49.26 | 13.9 |
| Zm00001d024947_P005 | Maize | plasma membrane | 50.37 | 13.56 |
| Zm00001d015326_P003 | Maize | mitochondrion, plastid | 50.37 | 13.44 |
| TraesCS2A01G044700.1 | Wheat | extracellular, plasma membrane | 50.37 | 13.1 |
| TraesCS2D01G043300.1 | Wheat | extracellular, plasma membrane | 49.63 | 13.06 |
| HORVU2Hr1G043830.5 | Barley | cytosol, nucleus, plastid | 49.63 | 13.04 |
| PGSC0003DMT400013717 | Potato | plastid | 41.48 | 13.01 |
| TraesCS2B01G056800.1 | Wheat | extracellular, plasma membrane | 50.37 | 12.98 |
| PGSC0003DMT400079306 | Potato | cytosol | 19.26 | 12.9 |
| PGSC0003DMT400038519 | Potato | endoplasmic reticulum | 41.11 | 12.6 |
| PGSC0003DMT400055250 | Potato | vacuole | 41.11 | 12.53 |
| PGSC0003DMT400063542 | Potato | extracellular, golgi, plasma membrane | 39.63 | 11.89 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 35.19 | 11.88 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 41.11 | 11.76 |
| PGSC0003DMT400063186 | Potato | plastid | 30.0 | 10.73 |
| HORVU2Hr1G006690.1 | Barley | peroxisome | 16.67 | 5.15 |
| PGSC0003DMT400020452 | Potato | cytosol | 2.96 | 4.85 |
| PGSC0003DMT400083163 | Potato | cytosol, mitochondrion, nucleus | 1.48 | 3.25 |
| PGSC0003DMT400079305 | Potato | cytosol, mitochondrion, plastid | 2.59 | 0.9 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039073 | EnsemblPlantsGene:PGSC0003DMG400015109 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 |
| PANTHER:PTHR23213:SF195 | PFAM:PF02181 | PFscan:PS51444 | PGSC:PGSC0003DMG400015109 | SEG:seg | SMART:SM00498 |
| SUPFAM:SSF101447 | UniParc:UPI000294F09F | UniProt:M1B7R3 | MapMan:20.2.2.6.1 | : | : |
Description
Actin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400015109]
Coordinates
chr10:+:1498400..1500871
Molecular Weight (calculated)
29667.0 Da
IEP (calculated)
5.720
GRAVY (calculated)
-0.449
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGVIVDNAS LTHENQCFMR VSHDDDVLQV GDAPAPATSS SETPNSLPPA RHPTQPFFPR DYNDSSKTSA PSDQSSTSQN STSDGNELPS ELLQTLLKMA
101: PTADKELKLR LYNGDLSRLG PAERFLKVLV DIPFAFKRLE SLLFMCSLEE EASMAKESFA TLEAACTELR KSRLFHKLLE AVLKTGNRMN DGTFRGGAQA
201: FKLDTLLKLS DVKGIDGKTT LLYFVVQEII RSEGIRAART RDRGSVSSLK SDDQEKSTGD YFHGNAGKDV
101: PTADKELKLR LYNGDLSRLG PAERFLKVLV DIPFAFKRLE SLLFMCSLEE EASMAKESFA TLEAACTELR KSRLFHKLLE AVLKTGNRMN DGTFRGGAQA
201: FKLDTLLKLS DVKGIDGKTT LLYFVVQEII RSEGIRAART RDRGSVSSLK SDDQEKSTGD YFHGNAGKDV
001: MVYFRQIFLM IIVVSLHCCK VRFFCIVANA KELDDWKVLT VENGERYRTH VGRYAGEEGG EKIKLRVLEK FRALLDLIKP STSRRRNLAE SASFSPWPAP
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
101: SPSPFPNGGP IESPAYPPAP PRPIPPHLRR PLPQRTHPLE QPEIQRRKHE KGGTFKKILV PVVASTASAI GFVVCVVGVF CLCARRKRKM NGKTLSFKRK
201: KGKSQSSTRK VSVNPTLDFL YLNSLGVDLE RQNSVSVKEI RETEKDLNGI NGGLLEEEVK RSIETEISHD WDNASSYSTK EIVSVHENDE EQTVNSVSVP
301: VVVINDSSDD DESFHSVGGG SQYSNPRLSN ASSASGSVNV GSSQRFSEHK LDIPECSRSD FGISVSAPPP PPPPPPPLPQ FSNKRIHTLS SPETANLQTL
401: SSQLCEKLCA SSSKTSFPIN VPNSQPRPPP PPPPPQQLQV AGINKTPPPP LSLDFSERRP LGKDGAPLPK LKPLHWDKVR ATPDRTMVWD KLRTSSFELD
501: EEMIESLFGY TMQSSTKNEE GKSKTPSPGK HLLEPKRLQN FTILLKALNA TADQICSALG KGEGLCLQQL EALVKMVPTK EEELKLRSYK GAVDELGSAE
601: KFLRALVGVP FAFQRAEAML YRETFEDEVV HLRNSFSMLE EACKELKSSR LFLKLLEAVL KTGNRMNVGT IRGGAKAFKL DALLKLSDVK GTDGKTTLLH
701: FVVQEISRSE GIRVSDSIMG RIMNQRSNKN RTPEEKEEDY RRMGLDLVSG LNTELRNVKK TATIDLEGLV TSVSNLRDGL GQLSCLASEK LKGDEENRAF
801: VSSMSSFLRY GEKSLEELRE DEKRIMERVG EIAEYFHGDV RGDEKNPLRI FVIVRDFLGM LDHVCRELRC VRVPNSPSPL APFR
Arabidopsis Description
FH11Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCE3]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.