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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G043300.1 Wheat extracellular, plasma membrane 28.75 24.46
TraesCS2B01G056800.1 Wheat extracellular, plasma membrane 28.52 23.76
TraesCS2A01G044700.1 Wheat extracellular, plasma membrane 28.06 23.6
Os04t0100300-00 Rice plasma membrane 22.11 23.45
AT4G15200.2 Thale cress extracellular, golgi, plasma membrane 11.34 21.24
EES10325 Sorghum golgi 23.37 21.16
VIT_19s0014g05040.t01 Wine grape cytosol, plastid 12.03 21.04
Zm00001d004557_P002 Maize golgi, plasma membrane, vacuole 22.45 20.72
PGSC0003DMT400083315 Potato cytosol 4.24 19.89
Zm00001d024947_P005 Maize plasma membrane 22.8 19.84
PGSC0003DMT400031544 Potato cytosol 9.74 18.72
GSMUA_Achr2P14090_001 Banana mitochondrion 13.4 17.59
HORVU4Hr1G069940.1 Barley plastid 11.11 16.75
VIT_12s0059g02680.t01 Wine grape golgi 15.35 16.73
PGSC0003DMT400039073 Potato cytosol 5.15 16.67
CDY22934 Canola nucleus, plastid 13.63 16.32
Bra029012.1-P Field mustard plasma membrane 16.04 16.3
CDY43029 Canola plasma membrane 15.92 16.11
CDY43811 Canola golgi 15.58 15.94
Bra002969.1-P Field mustard plasma membrane 15.58 15.51
CDY42470 Canola plasma membrane 15.23 15.48
HORVU2Hr1G043830.5 Barley cytosol, nucleus, plastid 18.1 15.37
AT5G54650.1 Thale cress extracellular, mitochondrion, nucleus, plasma membrane 15.69 15.22
Solyc10g006540.2.1 Tomato extracellular 16.27 15.22
CDY18346 Canola plasma membrane 15.12 15.14
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 13.75 15.06
Bra037087.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 13.86 14.83
KRH25896 Soybean plasma membrane 16.49 14.8
KRH25436 Soybean endoplasmic reticulum, golgi, vacuole 13.86 14.58
KRH55607 Soybean plasma membrane 16.27 14.52
CDY06511 Canola endoplasmic reticulum, golgi, plasma membrane 13.29 14.52
KRH56076 Soybean endoplasmic reticulum 13.86 14.37
KRH22219 Soybean endoplasmic reticulum, golgi, plasma membrane 14.89 14.33
PGSC0003DMT400049488 Potato golgi, plasma membrane, vacuole 14.2 14.24
Bra039561.1-P Field mustard golgi 13.63 14.22
CDY53556 Canola nucleus 13.75 14.2
KRH27118 Soybean plasma membrane 14.66 14.18
Solyc07g064010.2.1 Tomato golgi 14.43 14.17
PGSC0003DMT400036332 Potato plasma membrane 14.78 13.98
Solyc05g046120.2.1 Tomato plasma membrane 14.66 13.94
HORVU5Hr1G079700.1 Barley mitochondrion, plastid 10.65 13.86
Solyc07g052730.2.1 Tomato golgi 14.55 13.3
HORVU0Hr1G015390.6 Barley cytosol, plasma membrane, plastid 11.57 12.08
HORVU4Hr1G069930.2 Barley golgi, mitochondrion, plasma membrane 11.45 11.15
HORVU3Hr1G089510.1 Barley plasma membrane 12.03 11.04
HORVU6Hr1G076870.4 Barley plastid 11.0 10.25
HORVU2Hr1G035230.1 Barley golgi, plasma membrane, plastid 9.16 10.17
PGSC0003DMT400067386 Potato cytosol 4.01 10.09
HORVU1Hr1G077850.2 Barley mitochondrion 7.9 9.65
HORVU1Hr1G002300.8 Barley plastid 7.79 9.39
HORVU5Hr1G123610.1 Barley cytosol, plastid 0.34 7.5
HORVU6Hr1G085030.6 Barley plasma membrane 9.51 5.85
HORVU1Hr1G016320.4 Barley cytosol 6.3 5.09
HORVU5Hr1G020180.51 Barley mitochondrion 9.62 4.31
HORVU2Hr1G092520.9 Barley cytosol 3.32 3.43
HORVU2Hr1G034470.10 Barley cytosol 2.29 1.72
HORVU0Hr1G019600.1 Barley plasma membrane 0.57 1.54
CDX94358 Canola mitochondrion, plastid 0.11 0.64
PGSC0003DMT400036575 Potato mitochondrion 0.11 0.35
HORVU7Hr1G030310.1 Barley cytosol, plastid 0.23 0.33
Protein Annotations
EnsemblPlants:HORVU2Hr1G006690.1EnsemblPlantsGene:HORVU2Hr1G006690Gene3D:1.20.58.2220InterPro:FH2_ForminInterPro:IPR015425PANTHER:PTHR23213
PANTHER:PTHR23213:SF234PFAM:PF02181PFscan:PS51444SEG:segSUPFAM:SSF101447UniParc:UPI000B470513
UniProt:A0A287GZQ8MapMan:20.2.2.6.1::::
Description
No Description!
Coordinates
chrchr2H:+:14011026..14015395
Molecular Weight (calculated)
28929.9 Da
IEP (calculated)
7.265
GRAVY (calculated)
-0.123
Length
873 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXPAPPP
601: PAPGAPAPPP SAPGAPAPPP APGAPAPPPK PGGPPPPGPP APPGAKAGGG PGPPPPPLKP GGPPGAGPPP PAMPGGPRKG PPPLKRPGAA APVADSSKTK
701: LKPFFWDKVA ASADQAMVWD QIKAGSFQFN EEMIESLFGC NPVDKKSNDK KEPAKEVPQF VRILDAKKAQ NLAISLKALC VTAEDVRIAV TEGHDLPADL
801: IQTLLRWTPT SDEELRLRLY TGEMTQLGQA EQFLKIIIDI PYIFQRLETL LLMASLTEEA TGVEQSFKTL EVN
Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)
001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD
Arabidopsis Description
FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [mitochondrion,plasma membrane,extracellular,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.