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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • golgi 6
  • plasma membrane 6
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08280 Canola endoplasmic reticulum, golgi, plasma membrane 96.57 98.87
Bra039561.1-P Field mustard golgi 78.92 76.94
AT4G15200.2 Thale cress extracellular, golgi, plasma membrane 39.83 69.74
PGSC0003DMT400067386 Potato cytosol 24.75 58.21
GSMUA_Achr8P07370_001 Banana endoplasmic reticulum, golgi 30.15 49.5
VIT_12s0059g02680.t01 Wine grape golgi 46.32 47.19
KRH56076 Soybean endoplasmic reticulum 45.71 44.3
KRH25436 Soybean endoplasmic reticulum, golgi, vacuole 44.98 44.22
GSMUA_Achr3P23040_001 Banana cytosol, mitochondrion, plastid 35.05 44.07
Bra029012.1-P Field mustard plasma membrane 44.12 41.91
Bra002969.1-P Field mustard plasma membrane 44.85 41.73
Bra029655.1-P Field mustard cytosol 15.07 40.59
Solyc07g052730.2.1 Tomato golgi 46.57 39.79
PGSC0003DMT400036332 Potato plasma membrane 44.61 39.44
Solyc05g046120.2.1 Tomato plasma membrane 44.24 39.32
GSMUA_Achr2P14090_001 Banana mitochondrion 30.15 36.99
Bra035415.1-P Field mustard cytosol, plasma membrane, plastid 21.69 36.12
Bra012246.1-P Field mustard cytosol 8.46 35.2
TraesCS6D01G124300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 36.03 34.59
Os02t0161100-01 Rice golgi 37.13 34.39
TraesCS6B01G163200.1 Wheat plasma membrane 35.29 34.12
TraesCS6A01G135200.1 Wheat endoplasmic reticulum, golgi, plasma membrane 35.29 33.88
Os04t0100300-00 Rice plasma membrane 34.07 33.78
EER99497 Sorghum endoplasmic reticulum, plasma membrane, vacuole 37.5 33.74
HORVU0Hr1G015390.6 Barley cytosol, plasma membrane, plastid 34.56 33.73
Os07t0545500-01 Rice plasma membrane 38.11 33.48
EES04559 Sorghum plasma membrane 33.95 32.44
Zm00001d006549_P002 Maize endoplasmic reticulum, plasma membrane, vacuole 36.64 32.43
Zm00001d004557_P002 Maize golgi, plasma membrane, vacuole 37.38 32.24
EES10325 Sorghum golgi 37.75 31.95
Bra001256.1-P Field mustard plastid 14.83 31.76
TraesCS2B01G239500.1 Wheat plasma membrane 36.27 31.46
TraesCS2A01G214500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 36.4 31.4
TraesCS2D01G220300.1 Wheat plasma membrane 36.03 30.72
Zm00001d024947_P005 Maize plasma membrane 37.25 30.31
Bra024640.1-P Field mustard vacuole 27.21 29.84
HORVU2Hr1G043830.5 Barley cytosol, nucleus, plastid 36.4 28.89
Bra039436.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 28.92 28.82
Bra024447.1-P Field mustard extracellular, plasma membrane, vacuole 31.5 28.65
TraesCS2A01G044700.1 Wheat extracellular, plasma membrane 36.03 28.32
Bra016233.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 27.82 28.3
TraesCS2D01G043300.1 Wheat extracellular, plasma membrane 35.42 28.17
TraesCS2B01G056800.1 Wheat extracellular, plasma membrane 35.91 27.96
Bra001148.1-P Field mustard extracellular, golgi, plasma membrane 27.94 27.7
Zm00001d015326_P003 Maize mitochondrion, plastid 33.95 27.37
Bra004786.1-P Field mustard mitochondrion, plasma membrane, plastid 28.68 27.3
Bra000328.1-P Field mustard golgi, plasma membrane, vacuole 28.68 26.15
Bra017889.1-P Field mustard nucleus 23.53 24.3
Bra031838.1-P Field mustard cytosol 12.87 23.86
Bra013217.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 31.74 23.74
Bra038438.1-P Field mustard extracellular 8.21 22.11
Bra037491.1-P Field mustard endoplasmic reticulum, plasma membrane 21.81 22.06
HORVU2Hr1G006690.1 Barley peroxisome 14.83 13.86
Bra009306.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 20.1 13.26
Bra023204.1-P Field mustard cytosol 18.63 13.07
Bra007822.1-P Field mustard cytosol 17.16 12.52
Bra002668.1-P Field mustard cytosol 19.12 12.07
Bra020385.1-P Field mustard cytosol 18.75 10.96
Bra005952.1-P Field mustard nucleus 19.61 10.81
Bra028684.1-P Field mustard cytosol, nucleus, plasma membrane 19.98 10.02
Bra009307.1-P Field mustard cytosol 8.7 8.8
Bra020386.1-P Field mustard cytosol 4.78 8.55
Protein Annotations
Gene3D:1.20.58.2220MapMan:20.2.2.6.1EnsemblPlantsGene:Bra037087EnsemblPlants:Bra037087.1EnsemblPlants:Bra037087.1-Pncoils:Coil
InterPro:FH2_ForminGO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR015425UniProt:M4F7M6
PFAM:PF02181PFscan:PS51444PANTHER:PTHR23213PANTHER:PTHR23213:SF195SMART:SM00498SUPFAM:SSF101447
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00025475DESEG:seg::
Description
AT5G54650 (E=3e-148) Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); actin binding
Coordinates
chrA05:-:9934103..9936953
Molecular Weight (calculated)
89677.1 Da
IEP (calculated)
9.578
GRAVY (calculated)
-0.451
Length
816 amino acids
Sequence
(BLAST)
001: MGRLTKAFLA IFLVVLVCVS VEIIARDGAN RLRSSVSEEA HGVDMAEKTK IRCRKELKDE NKDCLVYISR EAAANGYVKL SVLTGYGHWF GPLLDSTPRR
101: KLISKKKKFT VSAPNFALGP APRLTPGPAP STSPSQPSSH SPPDESNSAP VKRKPSVVAP SPSVVLSPAK KYDILMQLII AVASTAVLTF FLVTLLFLCC
201: FRRNRSPRDG PRDEGQFLHL VDLSPGSNET SPAAANPSRR FFSASSKKKS FLSRMSLKRS GHDQFSTAQA STSSGHPPPL KLPPGRTAAP PPPPPPPAAP
301: APPPPQPPPP PKSKPPPPPK LVRPPPAPPK GAAGKRQGHH SSSGDASDVD SETGAPKTKL KPFFWDKMAN PDQKMVWHEI SAGSFQFNEE AMESLFGYND
401: GNKNKSGQRG ESSRDSHVQY IQIIDPRKAQ NLSILLRALN VTTEEVVEAI KEGNELPVEL LQTLLKMAPT TEEELKLRLY SGDVNLLGPA ERFLKILVDI
501: PFAFKRIESL LFMISLQEEV SGIKESLSTL EVACKKLRNS RLFLKLLEAV LKTGNRMNVG TFRGDAQAFK LDTLLKLSDV KGTDGKTTLL NFVVLEIIRS
601: EGVRALRLQS KSFSSVRTEE DTNNNNTDSS PQSVERYRST GLQVVSGLTT ELEDVKRAAV IDADGLAATL TNLSDSLTNA REFLKSMEEE SDFEKALAGF
701: IERADADIKW LKEEEERIMA LVKSSADYFH GKSAKNEGLR LFAIVRDFLI MLEKVCRHVK ETTTSATKTR THSGKKETQV TMQEDSHQPS TDNIQQRLFP
801: AIAERRDDSS DDSDDE
Best Arabidopsis Sequence Match ( AT1G70140.1 )
(BLAST)
001: MAAMFNHPWP NLTLIYFFFI VVLPFQSLSQ FDSPQNIETF FPISSLSPVP PPLLPPSSNP SPPSNNSSSS DKKTITKAVL ITAASTLLVA GVFFFCLQRC
101: IIARRRRDRV GPVRVENTLP PYPPPPMTSA AVTTTTLARE GFTRFGGVKG LILDENGLDV LYWRKLQSQR ERSGSFRKQI VTGEEEDEKE VIYYKNKKKT
201: EPVTEIPLLR GRSSTSHSVI HNEDHQPPPQ VKQSEPTPPP PPPSIAVKQS APTPSPPPPI KKGSSPSPPP PPPVKKVGAL SSSASKPPPA PVRGASGGET
301: SKQVKLKPLH WDKVNPDSDH SMVWDKIDRG SFSFDGDLME ALFGYVAVGK KSPEQGDEKN PKSTQIFILD PRKSQNTAIV LKSLGMTREE LVESLIEGND
401: FVPDTLERLA RIAPTKEEQS AILEFDGDTA KLADAETFLF HLLKSVPTAF TRLNAFLFRA NYYPEMAHHS KCLQTLDLAC KELRSRGLFV KLLEAILKAG
501: NRMNAGTARG NAQAFNLTAL LKLSDVKSVD GKTSLLNFVV EEVVRSEGKR CVMNRRSHSL TRSGSSNYNG GNSSLQVMSK EEQEKEYLKL GLPVVGGLSS
601: EFSNVKKAAC VDYETVVATC SALAVRAKDA KTVIGECEDG EGGRFVKTMM TFLDSVEEEV KIAKGEERKV MELVKRTTDY YQAGAVTKGK NPLHLFVIVR
701: DFLAMVDKVC LDIMRNMQRR KVGSPISPSS QRNAVKFPVL PPNFMSDRAW SDSGGSDSDM
Arabidopsis Description
FH8Formin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O04532]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.