CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	87.76	86.33
PGSC0003DMT400083315	Potato	cytosol	13.89	67.74
Os07t0545500-01	Rice	plasma membrane	64.61	63.08
TraesCS2B01G239500.1	Wheat	plasma membrane	62.62	60.36
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.95	60.36
TraesCS2D01G220300.1	Wheat	plasma membrane	61.96	58.73
PGSC0003DMT400036575	Potato	mitochondrion	18.41	58.39
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	62.73	55.35
PGSC0003DMT400067386	Potato	cytosol	21.17	55.33
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	29.66	53.91
CDX94358	Canola	mitochondrion, plastid	8.93	51.92
PGSC0003DMT400039073	Potato	cytosol	15.44	51.85
EES10325	Sorghum	golgi	53.69	50.52
PGSC0003DMT400031544	Potato	cytosol	23.04	46.04
VIT_12s0059g02680.t01	Wine grape	golgi	37.16	42.07
Bra029012.1-P	Field mustard	plasma membrane	39.03	41.21
CDY43811	Canola	golgi	38.7	41.15
CDY43029	Canola	plasma membrane	39.14	41.14
CDY22934	Canola	nucleus, plastid	31.86	39.64
CDY18346	Canola	plasma membrane	37.93	39.45
CDY42470	Canola	plasma membrane	37.16	39.23
Bra002969.1-P	Field mustard	plasma membrane	37.6	38.88
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	37.05	38.58
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	38.26	38.56
PGSC0003DMT400036332	Potato	plasma membrane	39.03	38.35
KRH25436	Soybean	endoplasmic reticulum, golgi, vacuole	34.73	37.95
Solyc05g046120.2.1	Tomato	plasma membrane	38.37	37.91
Solyc07g064010.2.1	Tomato	golgi	37.05	37.8
Solyc10g006540.2.1	Tomato	extracellular	38.81	37.73
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	33.74	37.5
KRH56076	Soybean	endoplasmic reticulum	34.73	37.41
Bra039561.1-P	Field mustard	golgi	34.4	37.28
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	32.64	37.14
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	32.64	37.05
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	36.38	36.38
KRH25896	Soybean	plasma membrane	38.81	36.18
KRH55607	Soybean	plasma membrane	38.92	36.09
KRH27118	Soybean	plasma membrane	35.61	35.77
CDY53556	Canola	nucleus	33.3	35.74
Solyc07g052730.2.1	Tomato	golgi	37.27	35.39
GSMUA_Achr2P14090_001	Banana	mitochondrion	25.36	34.59
EES04559	Sorghum	plasma membrane	29.33	31.15
AT4G15200.2	Thale cress	extracellular, golgi, plasma membrane	14.99	29.18
EER97466	Sorghum	plasma membrane	24.15	27.58
KXG38231	Sorghum	plastid	26.9	27.05
OQU88036	Sorghum	extracellular, plasma membrane	27.23	26.28
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	24.48	26.12
KXG39923	Sorghum	mitochondrion	26.68	25.72
EES12298	Sorghum	plasma membrane	23.48	25.0
EES05554	Sorghum	plasma membrane	24.26	23.91
KXG39193	Sorghum	plastid	22.27	23.71
EES13879	Sorghum	golgi	21.28	21.26
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	18.96	21.0
KXG25260	Sorghum	cytosol	17.2	12.89
OQU80260	Sorghum	cytosol	12.79	10.23
KXG31267	Sorghum	cytosol	16.54	10.06
OQU90190	Sorghum	cytosol	17.42	9.62
KXG23793	Sorghum	cytosol	16.65	7.49
EER87977	Sorghum	cytosol	3.64	6.15

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	EntrezGene:8081717	UniProt:C5XAU0	EnsemblPlants:EER99497	ProteinID:EER99497
ProteinID:EER99497.1	InterPro:FH2_Formin	InterPro:IPR015425	ProteinID:OQU90057.1	PFAM:PF02181	PRINTS:PR01217
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF195	SMART:SM00498	EnsemblPlantsGene:SORBI_3002G330100	SUPFAM:SSF101447
unigene:Sbi.9618	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A841A2	RefSeq:XP_002462976.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:69878132..69884161

Molecular Weight (calculated)

97715.8 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.431

Length

907 amino acids

Sequence
(BLAST)

001: MRHCWSAWLL ALCLVSVQLL VAAQNLSPPA LTPPLVKEVD DLVDHVWTSC GLDRGSLEDV RKHFNYNHVF DILRTLSGKD TKDSSPETEN VSKALPPQIK
101: NTLLNCLSKH PLVVAAQESA KNLPIDYIKM LIAMLRSDVA QGPPGASATP APPPAVKSNP SLGEPSSTKP DKNPVPPSET TPKEKTVPQT EKTAAKKEDN
201: SGMPTTALIG LSVSAIALLA LLCLCCCVCR AKQGSSSDVR DDKLLVNLNL SNLSAASLKF SQGNPIDINK LGALPLKSEA GQNGNVKQSS SEISKTEVTP
301: AVYNSLAEPM AASTGSFPGS RPTAPPAVPP PAPAPPKAPP SSTPQAPAPL KAPPSSTQVP APLKAPPSST PQAPTPHSKP TPILHPESSS PSAPKAAPSP
401: IDAPQPKAAP PPPPPKSTGP PPPAMPGSSK TRPPPLMKKS GNKMDDGANS HEAKTKLKPF FWDKVTAHAN QSMVWDHLKS GSFQFNEGKM ESLFGYNSVD
501: KTGGDGKKDL LSKDVPQFVR ILDPKKAQNL AISLRALSVS PEEVCSAVKE GNELPPDLID TLLKWTPSND EELRLRLYTG ELSQLGPAEQ FLKAIIDIPY
601: IFQRLDALLF MSNLPEEASN VKHSFATLEV ACQELKNSRL FLKLLEAVLK TGNRMNVGTF RGGAQAFKLD TLLKLSDVKG TDGKTTLLHF VVQEIIRSEG
701: IRATRAAKKQ DCSVSSVDAN DTDGNNMQTE DDYKQLGLKV VSNLGDELQN VRKAAILDAD QLTMSVASLG HKLGKTKEFL NTSMKSLDED SRFHHKLKHF
801: AEQSQTDVAL LLEEEKKIRS LVRGTVDYFH GSTGKDEGLR LFVVVRDFLA MLEKVCKEVK EASKVAPKKT KTPQPPQASF NDPRRKLFPA IQDQRTDSSS
901: SSSDEDD

Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Arabidopsis Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [mitochondrion,plasma membrane,extracellular,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.