CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 5
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42470	Canola	plasma membrane	93.81	95.23
Bra002969.1-P	Field mustard	plasma membrane	94.72	94.18
AT5G54650.1	Thale cress	extracellular, mitochondrion, nucleus, plasma membrane	85.32	82.67
CDY43029	Canola	plasma membrane	79.01	79.84
CDY43811	Canola	golgi	77.75	79.48
PGSC0003DMT400083315	Potato	cytosol	15.37	72.04
PGSC0003DMT400036575	Potato	mitochondrion	21.1	64.34
VIT_19s0014g05040.t01	Wine grape	cytosol, plastid	36.01	62.93
PGSC0003DMT400039073	Potato	cytosol	17.78	57.41
CDX94358	Canola	mitochondrion, plastid	9.98	55.77
PGSC0003DMT400031544	Potato	cytosol	28.1	53.96
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	29.13	51.11
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	35.67	47.92
CDY22934	Canola	nucleus, plastid	38.99	46.64
PGSC0003DMT400049488	Potato	golgi, plasma membrane, vacuole	46.1	46.15
Solyc10g006540.2.1	Tomato	extracellular	48.28	45.12
Solyc07g064010.2.1	Tomato	golgi	45.64	44.77
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	40.83	44.67
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	40.25	43.93
KRH27118	Soybean	plasma membrane	44.84	43.3
KRH22219	Soybean	endoplasmic reticulum, golgi, plasma membrane	44.72	43.0
CDY53556	Canola	nucleus	40.71	42.01
KRH25896	Soybean	plasma membrane	46.79	41.93
KRH55607	Soybean	plasma membrane	47.02	41.92
GSMUA_Achr2P14090_001	Banana	mitochondrion	30.05	39.4
Os04t0100300-00	Rice	plasma membrane	36.47	38.64
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	39.45	37.93
Zm00001d006549_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	39.11	36.98
Os07t0545500-01	Rice	plasma membrane	39.22	36.81
Zm00001d004557_P002	Maize	golgi, plasma membrane, vacuole	39.91	36.79
TraesCS6B01G163200.1	Wheat	plasma membrane	35.44	36.61
HORVU0Hr1G015390.6	Barley	cytosol, plasma membrane, plastid	35.09	36.6
TraesCS6A01G135200.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.67	36.59
EES10325	Sorghum	golgi	40.37	36.51
TraesCS6D01G124300.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.44	36.35
CDY70125	Canola	cytosol	19.95	36.25
CDY37849	Canola	endoplasmic reticulum	21.33	35.43
Os02t0161100-01	Rice	golgi	35.78	35.41
TraesCS2B01G239500.1	Wheat	plasma membrane	37.96	35.18
TraesCS2A01G214500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	37.73	34.78
EES04559	Sorghum	plasma membrane	33.6	34.31
Zm00001d024947_P005	Maize	plasma membrane	39.45	34.3
TraesCS2D01G220300.1	Wheat	plasma membrane	37.27	33.96
TraesCS2D01G043300.1	Wheat	extracellular, plasma membrane	38.88	33.04
TraesCS2A01G044700.1	Wheat	extracellular, plasma membrane	38.88	32.66
TraesCS2B01G056800.1	Wheat	extracellular, plasma membrane	38.99	32.44
CDY08720	Canola	mitochondrion	26.72	32.05
HORVU2Hr1G043830.5	Barley	cytosol, nucleus, plastid	37.39	31.71
CDY05170	Canola	extracellular, golgi, plasma membrane	26.49	31.01
CDY43578	Canola	endoplasmic reticulum, extracellular	29.13	30.24
CDY27766	Canola	golgi, plasma membrane, vacuole	27.18	29.77
CDX79799	Canola	mitochondrion, plastid, vacuole	26.83	29.47
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.03	29.25
CDY36494	Canola	endoplasmic reticulum, vacuole	30.16	29.16
CDY44259	Canola	plasma membrane, vacuole	27.98	28.94
CDX74146	Canola	extracellular, golgi, plasma membrane	26.61	28.89
CDX83457	Canola	golgi, plasma membrane, vacuole	27.87	28.83
Zm00001d015326_P003	Maize	mitochondrion, plastid	33.37	28.75
CDY16239	Canola	vacuole	23.05	28.63
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.72	28.52
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	25.69	28.28
CDY17909	Canola	golgi, vacuole	27.18	27.95
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	19.72	27.39
CDY55061	Canola	mitochondrion, nucleus	22.94	26.88
CDY31597	Canola	mitochondrion	19.5	26.73
CDY24501	Canola	mitochondrion, nucleus	23.05	24.85
CDY33614	Canola	mitochondrion, nucleus	21.9	24.81
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	29.7	24.46
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	29.7	24.07
CDX74041	Canola	golgi, plasma membrane, plastid	18.35	22.44
CDY28040	Canola	plastid	19.72	22.34
CDY35941	Canola	plastid	19.15	22.3
CDY07990	Canola	golgi, plasma membrane, plastid	18.35	22.16
CDX86310	Canola	endoplasmic reticulum, plasma membrane	20.07	21.69
CDX85333	Canola	plasma membrane	20.3	21.51
CDY27130	Canola	cytosol, mitochondrion	8.94	19.85
HORVU2Hr1G006690.1	Barley	peroxisome	15.14	15.12
CDY12361	Canola	cytosol	18.69	14.53
CDX99025	Canola	cytosol	18.23	13.64
CDX76779	Canola	cytosol	17.43	13.61
CDY34742	Canola	cytosol	17.32	13.45
CDY49153	Canola	cytosol	16.05	13.36
CDY14029	Canola	cytosol	18.69	13.24
CDY32721	Canola	cytosol	18.69	13.1
CDY02799	Canola	cytosol	18.58	12.95
CDX69994	Canola	plastid	17.55	12.89
CDY40774	Canola	cytosol	13.76	12.89
CDY12294	Canola	cytosol	17.78	12.72
CDY62689	Canola	cytosol	18.69	12.62
CDX99029	Canola	cytosol	0.23	12.5
CDY43877	Canola	cytosol	17.2	11.38
CDX81069	Canola	nucleus	18.69	11.23
CDX78309	Canola	nucleus	18.92	11.02
CDX69993	Canola	cytosol	15.14	10.88
CDX99026	Canola	cytosol	15.02	10.31
CDY02798	Canola	cytosol	4.82	8.57
CDX69992	Canola	cytosol	6.65	7.66
CDX99027	Canola	nucleus	4.7	4.75

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	GO:A0A078FZ69	UniProt:A0A078FZ69	EnsemblPlants:CDY18346	ProteinID:CDY18346
ProteinID:CDY18346.1	InterPro:FH2_Formin	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00002941001
InterPro:IPR015425	PFAM:PF02181	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF195	SMART:SM00498
SUPFAM:SSF101447	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDCBD8	SEG:seg	:

Description

BnaC09g30960DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ69]

Coordinates

chrLK032084:-:678114..681486

Molecular Weight (calculated)

95049.9 Da

IEP (calculated)

9.489

GRAVY (calculated)

-0.471

Length

872 amino acids

Sequence
(BLAST)

001: MGYQNRGGLV LWLILISGFL VVTTLEENIE KDEAFLTQFV APSTGMVNEQ MVESSWTRSC WQDSDCVKEA VAVFNLCLPA SRELFGFQHS HLKQTLLGCI
101: QEQAKLNGLN LKYRKLLPYV FHTPRRNLAS RPVSPSPSPP PKRSRGPPTR SRSPSPSNSF FPPTRSPPPL PPAKKTASSA KRKEEHEKTI IIAVVSTAVS
201: TFLLAALLFL CCTRVCGKGA GGRKYDERPL LSLSSSEHSV GSSINYGGSI KGGNQSFNIY SNQGKMSSFD GSNSDTSDSL EERLSHEGMR NNNINGSHGL
301: PPLKPPPGRT SSAHLGKPPS GKFLKVSSNK GSHHPQTPVP PPPMPSSAGP PRPPPPAPPP GSGGPKPPPP PGPKGPPPPP GQKGPRPPPP MSLGPKAPRP
401: SSGPAKSPSD DDGAPKTKLK PFFWDKVQAN PEHSMVWNDI RSGSFQFNEE MIESLFGYAA ADKIKSDKKG ASGQAAPQFV QILEPKKGQN LSILLRALNA
501: TTEEVCDALR EGNELPVEFI QTLLKMAPTP EEELKLRLYC GEIAQLGTAE RFLKAVVDIP FAFKRLEALL FMCTLYEEIA FVKESFQTLE VACQELRGSR
601: LFLKLLEAVL KTGNRMNDGT FRGGAQAFKL DTLLKLADVK GTDGKTTLLQ FVIQEIIRTE GRRAARTIRE SQSFSSVKTE DLMAEEASEE MEDSYRNLGL
701: QKVSGLSSEL EHVKKSANID ADGLTGTVLK MGHALSKARD FVNSEMKSSG EVSGFREALE DFIQNAEGSI ESILMEEKRI MALVKSTGDY FHGKAGKDEG
801: LRLFVIVRDF LIILDKICKE VKGRPVKMAR KQGSTASASS ETPRQAPSLD PKQKLFPAIT ERRMDQSSSD SD

Best Arabidopsis Sequence Match ( AT5G54650.1 )
(BLAST)

001: MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT
101: NLKQTLLDCI QEKGKLNGHN PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS RSPPPPPAKK NASKNSTSAP
201: VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN
301: SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP
401: KPPPPPGPKG PRPPPPMSLG PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF GYAAADKNKN DKKGSSGQAA
501: LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL
601: HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS
701: SVKTEDLLVE ETSEESEENY RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEESGF REALEDFIQN AEGSIMSILE
801: EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD

Arabidopsis Description

FH5Formin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q94B77]
SUBAcon: [extracellular,nucleus,plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.