Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 4
- golgi 3
- plasma membrane 4
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35941 | Canola | plastid | 88.18 | 90.65 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 63.64 | 68.72 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 64.16 | 68.42 |
| AT3G07540.1 | Thale cress | plasma membrane | 72.21 | 66.11 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 48.96 | 46.72 |
| CDX85333 | Canola | plasma membrane | 49.74 | 46.54 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 21.69 | 38.84 |
| PGSC0003DMT400056393 | Potato | cytosol | 22.73 | 36.46 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 26.36 | 36.06 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 18.96 | 33.26 |
| Os01t0897700-01 | Rice | cytosol | 10.26 | 32.38 |
| CDY37849 | Canola | endoplasmic reticulum | 21.95 | 32.19 |
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 6.23 | 31.37 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 28.7 | 30.57 |
| KRH47952 | Soybean | cytosol | 30.78 | 30.54 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 35.58 | 30.14 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 32.21 | 29.56 |
| CDX94358 | Canola | mitochondrion, plastid | 5.97 | 29.49 |
| CDY08720 | Canola | mitochondrion | 27.79 | 29.44 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 25.58 | 29.36 |
| GSMUA_Achr10P... | Banana | plastid | 30.39 | 29.14 |
| Zm00001d021173_P001 | Maize | plasma membrane | 28.83 | 29.13 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 29.61 | 28.93 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 31.17 | 28.47 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 31.04 | 28.45 |
| TraesCS5A01G304700.1 | Wheat | golgi | 28.96 | 28.34 |
| CDY17909 | Canola | golgi, vacuole | 31.17 | 28.3 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 38.18 | 28.3 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 28.83 | 28.24 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 29.09 | 28.21 |
| Solyc06g082910.2.1 | Tomato | extracellular | 34.16 | 28.1 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 28.7 | 28.08 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 34.42 | 28.07 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 32.47 | 27.72 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 38.83 | 27.71 |
| TraesCS1B01G059400.1 | Wheat | plastid | 20.26 | 27.71 |
| TraesCS1D01G010200.1 | Wheat | plastid | 20.39 | 27.64 |
| CDY44259 | Canola | plasma membrane, vacuole | 30.26 | 27.64 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 33.64 | 27.55 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 36.88 | 27.39 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 33.64 | 27.29 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 33.64 | 27.15 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 33.38 | 27.02 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 37.14 | 27.01 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 33.25 | 26.92 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 37.53 | 26.86 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 29.35 | 26.84 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 29.22 | 26.47 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 32.73 | 26.36 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 32.34 | 26.16 |
| HORVU1Hr1G002300.8 | Barley | plastid | 24.16 | 25.69 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 17.53 | 25.33 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 22.34 | 23.09 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 24.68 | 22.89 |
| CDY70125 | Canola | cytosol | 14.16 | 22.71 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 23.25 | 22.49 |
| CDY16239 | Canola | vacuole | 20.39 | 22.36 |
| CDY22934 | Canola | nucleus, plastid | 21.17 | 22.36 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 23.25 | 22.29 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 22.86 | 22.08 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 24.03 | 22.05 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 22.73 | 21.9 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.95 | 21.78 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.99 | 21.66 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 22.47 | 21.12 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 17.14 | 21.02 |
| CDY53556 | Canola | nucleus | 22.6 | 20.59 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 21.04 | 20.45 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 31.82 | 20.43 |
| CDY43811 | Canola | golgi | 22.34 | 20.16 |
| CDY42470 | Canola | plasma membrane | 22.21 | 19.91 |
| CDY43029 | Canola | plasma membrane | 22.21 | 19.81 |
| CDY18346 | Canola | plasma membrane | 22.34 | 19.72 |
| CDY55061 | Canola | mitochondrion, nucleus | 17.92 | 18.55 |
| CDY31597 | Canola | mitochondrion | 15.06 | 18.24 |
| CDY27130 | Canola | cytosol, mitochondrion | 8.96 | 17.56 |
| CDY24501 | Canola | mitochondrion, nucleus | 18.05 | 17.18 |
| CDY33614 | Canola | mitochondrion, nucleus | 17.01 | 17.01 |
| CDX99029 | Canola | cytosol | 0.26 | 12.5 |
| CDY12361 | Canola | cytosol | 16.49 | 11.32 |
| CDY49153 | Canola | cytosol | 15.19 | 11.16 |
| CDX76779 | Canola | cytosol | 15.58 | 10.74 |
| CDY34742 | Canola | cytosol | 15.58 | 10.69 |
| CDY12294 | Canola | cytosol | 16.75 | 10.58 |
| CDY62689 | Canola | cytosol | 17.53 | 10.45 |
| Zm00001d035757_P003 | Maize | plasma membrane | 22.73 | 10.4 |
| CDX99025 | Canola | cytosol | 15.71 | 10.38 |
| CDY32721 | Canola | cytosol | 16.75 | 10.37 |
| CDY40774 | Canola | cytosol | 12.34 | 10.2 |
| CDY02799 | Canola | cytosol | 16.49 | 10.15 |
| CDX69994 | Canola | plastid | 15.45 | 10.03 |
| CDY14029 | Canola | cytosol | 15.58 | 9.75 |
| CDY43877 | Canola | cytosol | 16.36 | 9.56 |
| CDX69993 | Canola | cytosol | 13.38 | 8.49 |
| CDX78309 | Canola | nucleus | 16.1 | 8.28 |
| CDX81069 | Canola | nucleus | 15.58 | 8.26 |
| CDX99026 | Canola | cytosol | 13.38 | 8.1 |
| CDY02798 | Canola | cytosol | 4.03 | 6.33 |
| CDX69992 | Canola | cytosol | 5.45 | 5.55 |
| CDX99027 | Canola | nucleus | 3.77 | 3.36 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.1 | GO:A0A078GNE4 | UniProt:A0A078GNE4 | EnsemblPlants:CDY28040 | ProteinID:CDY28040 |
| ProteinID:CDY28040.1 | InterPro:FH2_Formin | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00038980001 |
| InterPro:IPR015425 | PFAM:PF02181 | PFscan:PS51257 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 |
| SMART:SM00498 | SUPFAM:SSF101447 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF2C4F | SEG:seg |
Description
BnaC05g44420DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNE4]
Coordinates
chrLK032213:+:363916..366664
Molecular Weight (calculated)
84902.2 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.328
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGLCYVIFI TLISCASSRL PCASPAIFSR RHLSQAPVTD PSTPTPGGLP FFPADGLSSP LPPPPPPLPM PPPTPLPPSA PTYATFPANI SALVLPRSSK
101: PHTASRTLLI TLISAVLAVA TAIGVALFLY GRWRGQNRNF KDDSKSVASD SKQAAPCPLP RNNTEHNKLT VSASTTSDVL YLGNVANFVK PESPEICPLP
201: PLSSRSFKQQ SSEEEEDDFY SPLASQAGKE SRELRNYSSS DSPATSPPSV DISPVRSNKR NHVASSLRTF TLWNQNHAFP RISSASTSPE RGGGVGGTIR
301: TPDAYARSSM YSSVSTTPDR FFRKVLEASS PPRWNDFSRN VKSLFLSSAS SPARDFCIDN VSEASSRKLK SSWEKPELDI ESAAPPPPER PPPPAMPAPP
401: PLVPPSQSFM VHKSGKKLSW DGATKMKPLP WERVHRPSSC RKNTWESLKF NSFNANPKQR SLSCDLPMFN QESRVLDPRK SQSIAFLLST LDLTTDDVLQ
501: ALRDGHYEAL GVELLESLSR VAPSEEEERK LKSYSDDKLP PSEKFLKELL NVPFVFRRVD ALLFVATFYS KVEHLKQSFG VIQAACEELR NSRMLLKLIE
601: VVLETGTKSV NAQDFKLEAL LDGSTTLLHS VVENIIESEG IKVLQVVRHL GLVLVDVKKT AEMDYGVLRS EVAKLYQGVQ SVKEVLLLSD DEEQECGEFK
701: ETVTKFLETA VKEAKKIETE DGSTLLAVKE ITEMFHGDSA KEEAQLLRVF VIVRDFMSIL DKVCKEMEVE
101: PHTASRTLLI TLISAVLAVA TAIGVALFLY GRWRGQNRNF KDDSKSVASD SKQAAPCPLP RNNTEHNKLT VSASTTSDVL YLGNVANFVK PESPEICPLP
201: PLSSRSFKQQ SSEEEEDDFY SPLASQAGKE SRELRNYSSS DSPATSPPSV DISPVRSNKR NHVASSLRTF TLWNQNHAFP RISSASTSPE RGGGVGGTIR
301: TPDAYARSSM YSSVSTTPDR FFRKVLEASS PPRWNDFSRN VKSLFLSSAS SPARDFCIDN VSEASSRKLK SSWEKPELDI ESAAPPPPER PPPPAMPAPP
401: PLVPPSQSFM VHKSGKKLSW DGATKMKPLP WERVHRPSSC RKNTWESLKF NSFNANPKQR SLSCDLPMFN QESRVLDPRK SQSIAFLLST LDLTTDDVLQ
501: ALRDGHYEAL GVELLESLSR VAPSEEEERK LKSYSDDKLP PSEKFLKELL NVPFVFRRVD ALLFVATFYS KVEHLKQSFG VIQAACEELR NSRMLLKLIE
601: VVLETGTKSV NAQDFKLEAL LDGSTTLLHS VVENIIESEG IKVLQVVRHL GLVLVDVKKT AEMDYGVLRS EVAKLYQGVQ SVKEVLLLSD DEEQECGEFK
701: ETVTKFLETA VKEAKKIETE DGSTLLAVKE ITEMFHGDSA KEEAQLLRVF VIVRDFMSIL DKVCKEMEVE
001: MDGLCYVIFI IFSLLSCAFS PLSYASPATF SRRHLLQAPV TDPSTFSPPF FPLYSSTSPP PPPSPPQPLP PPAPTFATFP ANISALVLPR SPKPQTPSRT
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A
Arabidopsis Description
FH10Formin-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.