Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0227g00200.t01 | Wine grape | cytosol | 40.16 | 64.05 |
| AT3G25493.1 | Thale cress | vacuole | 33.2 | 50.62 |
| Bra012246.1-P | Field mustard | cytosol | 31.97 | 39.8 |
| PGSC0003DMT400056393 | Potato | cytosol | 61.48 | 31.25 |
| Bra029655.1-P | Field mustard | cytosol | 32.38 | 26.07 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 91.8 | 23.83 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 92.62 | 23.81 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 92.62 | 23.74 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 92.62 | 23.69 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 92.21 | 23.66 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 87.7 | 22.38 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 86.48 | 22.19 |
| Bra001256.1-P | Field mustard | plastid | 31.97 | 20.47 |
| KRH47952 | Soybean | cytosol | 63.93 | 20.1 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 33.61 | 18.68 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 69.26 | 18.17 |
| PGSC0003DMT400013717 | Potato | plastid | 61.89 | 17.54 |
| Solyc12g019480.1.1 | Tomato | nucleus | 61.89 | 17.0 |
| KRH71295 | Soybean | vacuole | 61.07 | 16.93 |
| KRH50174 | Soybean | vacuole | 61.48 | 16.74 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 62.3 | 16.72 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 53.28 | 16.5 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 52.05 | 15.99 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 67.62 | 15.7 |
| Solyc06g082910.2.1 | Tomato | extracellular | 59.43 | 15.49 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 59.02 | 15.25 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 65.98 | 15.2 |
| PGSC0003DMT400064911 | Potato | endoplasmic reticulum, plasma membrane | 46.72 | 15.1 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 66.39 | 15.06 |
| Os03t0204100-01 | Rice | plasma membrane | 54.51 | 14.91 |
| CDY17909 | Canola | golgi, vacuole | 51.64 | 14.86 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 66.39 | 14.85 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 50.82 | 14.71 |
| Bra004786.1-P | Field mustard | mitochondrion, plasma membrane, plastid | 51.23 | 14.59 |
| Solyc08g014430.2.1 | Tomato | nucleus | 45.08 | 14.53 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 61.48 | 14.46 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 63.52 | 14.37 |
| CDY44259 | Canola | plasma membrane, vacuole | 49.59 | 14.35 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 61.07 | 14.34 |
| Os07t0588200-01 | Rice | golgi, plasma membrane, vacuole | 44.67 | 14.08 |
| Os10t0347800-00 | Rice | cytosol, nucleus, plastid | 48.77 | 13.92 |
| Bra000328.1-P | Field mustard | golgi, plasma membrane, vacuole | 50.82 | 13.85 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 50.41 | 13.76 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 38.11 | 11.89 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 39.75 | 11.69 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 32.38 | 11.08 |
| Os04t0100300-00 | Rice | plasma membrane | 36.48 | 10.81 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 31.97 | 10.8 |
| Os02t0161100-01 | Rice | golgi | 38.93 | 10.78 |
| CDX85333 | Canola | plasma membrane | 36.07 | 10.69 |
| Os04t0461800-01 | Rice | extracellular | 36.48 | 10.68 |
| Os07t0545500-01 | Rice | plasma membrane | 39.75 | 10.44 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 34.02 | 10.29 |
| CDY28040 | Canola | plastid | 32.38 | 10.26 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 33.61 | 10.16 |
| CDY35941 | Canola | plastid | 31.15 | 10.15 |
| Os10t0119300-01 | Rice | mitochondrion | 16.39 | 9.59 |
| AT3G07540.1 | Thale cress | plasma membrane | 32.38 | 9.39 |
| Os08t0280200-02 | Rice | nucleus | 18.85 | 5.15 |
| Os02t0794900-00 | Rice | cytosol | 15.16 | 2.68 |
| Os07t0596300-02 | Rice | plastid | 16.39 | 2.46 |
| Os08t0431200-00 | Rice | cytosol | 3.28 | 1.54 |
| Os04t0245000-00 | Rice | plasma membrane | 0.41 | 0.08 |
| Os06t0184400-00 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0897700-01 | EnsemblPlantsGene:Os01g0897700 | Gene3D:1.20.58.2220 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:FH2_Formin | InterPro:IPR015425 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF276 | PFAM:PF02181 | PFscan:PS51444 |
| ProteinID:BAS75716.1 | SEG:seg | SUPFAM:SSF101447 | UniParc:UPI0000DD8E5B | UniProt:A0A0P0VBL3 | MapMan:20.2.2.6.1 |
Description
Formin homology 1, type I ForminSimilar to FH protein NFH1. (Os01t0897700-01)
Coordinates
chr1:-:39013826..39014879
Molecular Weight (calculated)
27081.3 Da
IEP (calculated)
6.726
GRAVY (calculated)
-0.292
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: RGDAHAFKLD TLLKLVDVKG TDGKTTLLHF VVQEIIRTEG SHLSASNQST PRTQANPLRD ELECKKLGLQ VVAGLGNELS NVKKAAAMDS DVLSSYVSKL
101: AGGIEKITEV LRLNEEVKSR EDAWRFHDSM QKFLKRADDD IIRVQAQESV ALSLVKEITE YFHGDSAKEE AHPFRIFMVV RDFLSVLDQV CKEVGRINDR
201: TIASSVRHFP VPVNPMMPQL FPRIHALRAG ISDDESSATS ASSP
101: AGGIEKITEV LRLNEEVKSR EDAWRFHDSM QKFLKRADDD IIRVQAQESV ALSLVKEITE YFHGDSAKEE AHPFRIFMVV RDFLSVLDQV CKEVGRINDR
201: TIASSVRHFP VPVNPMMPQL FPRIHALRAG ISDDESSATS ASSP
001: MPSILAIHMG LLCILSVNDE NTLSDHASSD QVQSTITEES NSQRFSESME TFLKRAEEEI IRVQAQESVA LSLVKEITEY FHGNSAKEEA HPFRIFLVVR
101: DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMMPQPL PGLVGRKQSS SSSLSAASFN
101: DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMMPQPL PGLVGRKQSS SSSLSAASFN
Arabidopsis Description
Formin-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNY7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.