Factsheet for Bra001256.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012246.1-P	Field mustard	cytosol	49.87	96.94
Bra029655.1-P	Field mustard	cytosol	55.64	69.97
CDX74041	Canola	golgi, plasma membrane, plastid	96.59	51.61
PGSC0003DMT400056393	Potato	cytosol	46.19	36.67
VIT_00s0227g00200.t01	Wine grape	cytosol	14.17	35.29
Os01t0897700-01	Rice	cytosol	20.47	31.97
AT3G07540.1	Thale cress	plasma membrane	69.29	31.39
GSMUA_Achr11P...	Banana	mitochondrion, plastid	33.86	30.0
GSMUA_Achr5P25760_001	Banana	mitochondrion	33.6	29.16
GSMUA_Achr6P18370_001	Banana	nucleus	42.78	28.95
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	42.52	24.14
KRH47952	Soybean	cytosol	49.08	24.1
TraesCS1A01G011800.1	Wheat	extracellular	32.02	22.89
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	47.51	22.43
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	28.61	22.24
TraesCS1D01G010200.1	Wheat	plastid	32.28	21.65
TraesCS1B01G059400.1	Wheat	plastid	31.5	21.31
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	43.31	20.94
Zm00001d021173_P001	Maize	plasma membrane	41.47	20.73
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	42.26	20.48
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	41.99	20.33
TraesCS5A01G304700.1	Wheat	golgi	41.99	20.33
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	48.03	20.13
Bra031838.1-P	Field mustard	cytosol	22.31	19.32
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	43.04	19.29
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	41.21	18.65
GSMUA_Achr10P...	Banana	plastid	39.11	18.56
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	41.73	18.55
Zm00001d012158_P001	Maize	extracellular, plasma membrane	45.41	18.19
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.78	18.17
Solyc06g082910.2.1	Tomato	extracellular	44.62	18.16
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	39.9	18.12
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	42.52	18.1
OQU88036	Sorghum	extracellular, plasma membrane	44.36	17.98
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	44.36	17.9
Bra038438.1-P	Field mustard	extracellular	14.17	17.82
Zm00001d042506_P002	Maize	extracellular, plasma membrane	44.62	17.78
TraesCS3A01G397900.1	Wheat	plasma membrane	44.09	17.7
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	33.33	17.57
HORVU3Hr1G089510.1	Barley	plasma membrane	43.83	17.56
TraesCS3D01G391800.1	Wheat	mitochondrion	43.83	17.54
TraesCS3B01G429900.1	Wheat	plasma membrane	43.83	17.51
Bra024640.1-P	Field mustard	vacuole	34.12	17.47
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	48.82	17.24
KRH00989	Soybean	extracellular, golgi, vacuole	46.46	17.04
HORVU1Hr1G002300.8	Barley	plastid	32.28	16.99
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	48.03	16.77
KRH40232	Soybean	endoplasmic reticulum, extracellular	45.14	16.59
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	32.81	15.59
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	33.6	15.55
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.07	15.38
Os05t0104000-00	Rice	endoplasmic reticulum, plasma membrane	32.81	15.06
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	31.76	14.83
Bra029012.1-P	Field mustard	plasma membrane	33.33	14.78
TraesCS1B01G414300.1	Wheat	endoplasmic reticulum	32.02	14.54
Bra002969.1-P	Field mustard	plasma membrane	33.33	14.48
Bra039561.1-P	Field mustard	golgi	31.76	14.46
Bra017889.1-P	Field mustard	nucleus	29.13	14.05
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	28.61	13.31
GSMUA_Achr7P23740_001	Banana	plastid	40.16	12.76
Zm00001d035757_P003	Maize	plasma membrane	29.13	6.6
Bra023204.1-P	Field mustard	cytosol	19.95	6.53
Bra007822.1-P	Field mustard	cytosol	19.16	6.53
Bra002668.1-P	Field mustard	cytosol	21.0	6.19
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	19.68	6.06
Bra020385.1-P	Field mustard	cytosol	20.47	5.59
Bra005952.1-P	Field mustard	nucleus	19.95	5.14
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	19.95	4.67
Bra009307.1-P	Field mustard	cytosol	6.3	2.97
Bra020386.1-P	Field mustard	cytosol	0.79	0.66

Protein Annotations

EnsemblPlants:Bra001256.1	EnsemblPlants:Bra001256.1-P	EnsemblPlantsGene:Bra001256	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
PANTHER:PTHR23213	PANTHER:PTHR23213:SF261	PFAM:PF02181	PFscan:PS51444	SEG:seg	SMART:SM00498
SUPFAM:SSF101447	UniParc:UPI00025404C8	UniProt:M4CAM7	MapMan:35.1	:	:

Description

AT3G07540 (E=1e-116) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA03:-:15545258..15546720

Molecular Weight (calculated)

42770.5 Da

IEP (calculated)

5.043

GRAVY (calculated)

-0.157

Length

381 amino acids

Sequence
(BLAST)

001: MPVPPPLVPP SQSFTAQKLS FSELPQSCCW EGTAERAKPK MKPLPFRPSS CRKNTWDSTK FNSLNVNPKQ RSLSCDLPML NQESRVLDPR KSQSVAFLLT
101: RLDLTTNDVL QALQDGHYEA IGVEILESLS RIAPSEEEER KLKSYSDVKL ASSEKFLKEI LNVPFVFKRV DALLSVATFG SKIQNLKQSF GVIQAACEEL
201: RNTKTLLKLL EAVFERGTNS LEALLELVGR TNILHSVVHG IIESEGIRGL QAVGSLSSVF VEVKKAGEMD YGVLRSEVFD IYQGVKKVSE VLLLLNGENG
301: DGEEQRWWTF RESMTRFLET AIEEIKMIET IEGCVISAVK EVTEYFHGDS AKEEAQVLRV FVVVRDFLFI LDEVCKEIDA S

Best Arabidopsis Sequence Match ( AT3G07540.1 )
(BLAST)

001: MDGLCYVIFI IFSLLSCAFS PLSYASPATF SRRHLLQAPV TDPSTFSPPF FPLYSSTSPP PPPSPPQPLP PPAPTFATFP ANISALVLPR SPKPQTPSRT
101: LLIPAISAVL AAATLIALAF FFYGRWRGQT SHFKDESKSL ASDISQSQQQ TLPCPPPRNN NTQNKLSVAP STSDVLYLGN VVTSSGSGFV KPESPDISPL
201: PPLPARSFLL QHHSEANLDE EEEDDDFYSP LASIAGQESR DRRINPYSNC SCSISSHSDS PAMSPSAAMS PPMNSTAPHW STNQNTHSPS SPERTVRNNK
301: RYGGQSLRMF SLWNQNLGFP RISSASTSPE RGMIRTPDAY ARSSMYSSVS TTPDRFFRKV LDSSPPRWND FSRNVKSLFL SSTSASPARD FCINISESSR
401: SLKSSWEKPE LDTTQQRESA AAAVTLPPPQ RPPPAMPEPP PLVPPSQSFM VQKSGKKLSF SELPQSCGEG TTDRPKPKLK PLPWDKVRPS SRRTNTWDRL
501: PYNSSNANSK QRSLSCDLPM LNQESKVLDP RKSQNVAVLL TTLKLTTNDV CQALRDGHYD ALGVELLESL ARVAPSEEEE KKLISYSDDS VIKLAPSERF
601: LKELLNVPFV FKRVDALLSV ASFDSKVKHL KRSFSVIQAA CEALRNSRML LRLVGATLEA GMKSGNAHDF KLEALLGLVD IKSSDGRTSI LDSVVQKITE
701: SEGIKGLQVV RNLSSVLNDA KKSAELDYGV VRMNVSKLYE EVQKISEVLR LCEETGHSEE HQWWKFRESV TRFLETAAEE IKKIEREEGS TLFAVKKITE
801: YFHVDPAKEE AQLLKVFVIV RDFLKILEGV CKKMEVTSSL A

Arabidopsis Description

FH10Formin-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.