Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G25493.1 | Thale cress | vacuole | 57.52 | 55.0 |
| Os01t0897700-01 | Rice | cytosol | 64.05 | 40.16 |
| Bra012246.1-P | Field mustard | cytosol | 35.29 | 27.55 |
| PGSC0003DMT400056393 | Potato | cytosol | 75.16 | 23.96 |
| GSMUA_Achr6P18370_001 | Banana | nucleus | 69.28 | 18.83 |
| Bra029655.1-P | Field mustard | cytosol | 32.03 | 16.17 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 44.44 | 15.81 |
| KRH47952 | Soybean | cytosol | 75.16 | 14.82 |
| Bra001256.1-P | Field mustard | plastid | 35.29 | 14.17 |
| Solyc09g042740.2.1 | Tomato | endoplasmic reticulum, vacuole | 73.2 | 12.32 |
| VIT_05s0094g00920.t01 | Wine grape | nucleus | 73.86 | 12.15 |
| HORVU5Hr1G079700.1 | Barley | mitochondrion, plastid | 50.98 | 11.62 |
| PGSC0003DMT400071147 | Potato | endoplasmic reticulum, golgi | 68.63 | 11.12 |
| Solyc06g082910.2.1 | Tomato | extracellular | 67.97 | 11.11 |
| KRH40232 | Soybean | endoplasmic reticulum, extracellular | 73.2 | 10.8 |
| KRH00989 | Soybean | extracellular, golgi, vacuole | 73.2 | 10.78 |
| KRH06515 | Soybean | endoplasmic reticulum, plastid, vacuole | 75.82 | 10.75 |
| GSMUA_Achr5P25760_001 | Banana | mitochondrion | 30.07 | 10.48 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.9 | 10.39 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 70.59 | 10.28 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.24 | 10.13 |
| OQU88036 | Sorghum | extracellular, plasma membrane | 62.09 | 10.11 |
| Zm00001d042506_P002 | Maize | extracellular, plasma membrane | 62.75 | 10.04 |
| Bra013217.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid, vacuole | 71.24 | 9.99 |
| TraesCS5A01G304700.1 | Wheat | golgi | 50.98 | 9.91 |
| TraesCS5B01G305100.1 | Wheat | golgi, plasma membrane | 50.98 | 9.91 |
| Zm00001d012158_P001 | Maize | extracellular, plasma membrane | 61.44 | 9.88 |
| TraesCS5D01G311600.1 | Wheat | golgi, plasma membrane | 50.33 | 9.8 |
| TraesCS1A01G011800.1 | Wheat | extracellular | 33.99 | 9.76 |
| TraesCS3A01G397900.1 | Wheat | plasma membrane | 60.13 | 9.69 |
| HORVU3Hr1G089510.1 | Barley | plasma membrane | 60.13 | 9.67 |
| TraesCS3D01G391800.1 | Wheat | mitochondrion | 60.13 | 9.66 |
| Os09t0517600-01 | Rice | endoplasmic reticulum, plasma membrane | 49.67 | 9.64 |
| TraesCS3B01G429900.1 | Wheat | plasma membrane | 60.13 | 9.64 |
| VIT_19s0014g05040.t01 | Wine grape | cytosol, plastid | 31.37 | 9.62 |
| TraesCS1D01G010200.1 | Wheat | plastid | 34.64 | 9.33 |
| VIT_07s0129g00220.t01 | Wine grape | endoplasmic reticulum, extracellular | 53.59 | 9.26 |
| TraesCS1B01G059400.1 | Wheat | plastid | 33.33 | 9.06 |
| GSMUA_Achr10P... | Banana | plastid | 47.06 | 8.97 |
| EER97050 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 48.37 | 8.71 |
| GSMUA_Achr2P11400_001 | Banana | endoplasmic reticulum, extracellular | 38.56 | 8.16 |
| Zm00001d006132_P001 | Maize | golgi, mitochondrion, plastid | 44.44 | 8.08 |
| Zm00001d021173_P001 | Maize | plasma membrane | 38.56 | 7.74 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 35.29 | 7.57 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 35.29 | 7.48 |
| HORVU1Hr1G002300.8 | Barley | plastid | 35.29 | 7.46 |
| GSMUA_Achr9P02450_001 | Banana | plasma membrane, plastid | 40.52 | 7.39 |
| GSMUA_Achr7P23740_001 | Banana | plastid | 52.29 | 6.67 |
| Os05t0104000-00 | Rice | endoplasmic reticulum, plasma membrane | 35.95 | 6.63 |
| EES17525 | Sorghum | endoplasmic reticulum, plasma membrane | 35.29 | 6.59 |
| CDX85333 | Canola | plasma membrane | 34.64 | 6.44 |
| VIT_12s0059g02680.t01 | Wine grape | golgi | 33.33 | 6.37 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 32.03 | 6.27 |
| CDY28040 | Canola | plastid | 31.37 | 6.23 |
| TraesCS1B01G414300.1 | Wheat | endoplasmic reticulum | 33.99 | 6.2 |
| Bra037491.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 32.68 | 6.2 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 32.03 | 6.07 |
| CDY35941 | Canola | plastid | 28.76 | 5.87 |
| AT3G07540.1 | Thale cress | plasma membrane | 31.37 | 5.71 |
| VIT_14s0060g02330.t01 | Wine grape | golgi, plasma membrane, vacuole | 35.29 | 5.64 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 24.84 | 4.64 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 23.53 | 4.41 |
| VIT_17s0000g07570.t01 | Wine grape | nucleus | 22.88 | 4.12 |
| Zm00001d035757_P003 | Maize | plasma membrane | 36.6 | 3.33 |
| VIT_04s0008g06530.t01 | Wine grape | cytosol, nucleus, plasma membrane | 17.65 | 1.83 |
| VIT_11s0016g00160.t01 | Wine grape | cytosol | 13.07 | 1.73 |
| VIT_02s0033g01360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 14.38 | 1.68 |
| VIT_17s0000g06640.t01 | Wine grape | cytosol, mitochondrion, plasma membrane, plastid | 14.38 | 1.66 |
Protein Annotations
| Gene3D:1.20.58.2220 | EntrezGene:100252716 | wikigene:100252716 | MapMan:35.1 | ProteinID:CCB50010 | ProteinID:CCB50010.1 |
| UniProt:F6HCR5 | InterPro:FH2_Formin | EMBL:FN595520 | InterPro:IPR015425 | EntrezGene:LOC100252716 | wikigene:LOC100252716 |
| PFAM:PF02181 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF261 | SUPFAM:SSF101447 | TIGR:TC64949 |
| UniParc:UPI00021095E8 | ArrayExpress:VIT_00s0227g00200 | EnsemblPlantsGene:VIT_00s0227g00200 | EnsemblPlants:VIT_00s0227g00200.t01 | unigene:Vvi.3174 | RefSeq:XP_002271608 |
| RefSeq:XP_002271608.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:15167190..15168076
Molecular Weight (calculated)
17111.3 Da
IEP (calculated)
5.022
GRAVY (calculated)
-0.270
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSDVLSSDV SKLSRGIGNI REVVRLNQAV GLVESSQKFC ESMNSFMKMA EEEIIRIQAL ESVALSLVKE ITEYFHGNSA KEEAHPFRIF MVVRDFLTNL
101: DRVCKEVGMI NERTIVSTAH KFPVPVNPTL PTGFPASNER HQYSSSDDES SSP
101: DRVCKEVGMI NERTIVSTAH KFPVPVNPTL PTGFPASNER HQYSSSDDES SSP
001: MPSILAIHMG LLCILSVNDE NTLSDHASSD QVQSTITEES NSQRFSESME TFLKRAEEEI IRVQAQESVA LSLVKEITEY FHGNSAKEEA HPFRIFLVVR
101: DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMMPQPL PGLVGRKQSS SSSLSAASFN
101: DFLGVVDRVC KEVGMINERT MVSSAHKFPV PVNPMMPQPL PGLVGRKQSS SSSLSAASFN
Arabidopsis Description
Formin-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNY7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.