CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021173_P001	Maize	plasma membrane	78.35	87.4
Zm00001d006132_P001	Maize	golgi, mitochondrion, plastid	84.82	85.63
HORVU5Hr1G079700.1	Barley	mitochondrion, plastid	60.94	77.2
Os09t0517600-01	Rice	endoplasmic reticulum, plasma membrane	68.82	74.24
TraesCS5B01G305100.1	Wheat	golgi, plasma membrane	68.59	74.08
TraesCS5D01G311600.1	Wheat	golgi, plasma membrane	68.12	73.66
TraesCS5A01G304700.1	Wheat	golgi	68.12	73.57
PGSC0003DMT400056393	Potato	cytosol	31.29	55.42
Bra029655.1-P	Field mustard	cytosol	17.29	48.51
VIT_00s0227g00200.t01	Wine grape	cytosol	8.71	48.37
Bra012246.1-P	Field mustard	cytosol	10.47	45.41
Bra001256.1-P	Field mustard	plastid	19.29	43.04
CDX79799	Canola	mitochondrion, plastid, vacuole	37.41	40.05
KRH47952	Soybean	cytosol	35.65	39.05
PGSC0003DMT400064911	Potato	endoplasmic reticulum, plasma membrane	34.59	38.94
AT3G25493.1	Thale cress	vacuole	7.29	38.75
Solyc12g019480.1.1	Tomato	nucleus	40.24	38.51
PGSC0003DMT400013717	Potato	plastid	38.82	38.33
CDY17909	Canola	golgi, vacuole	38.24	38.33
Solyc08g014430.2.1	Tomato	nucleus	34.12	38.31
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	38.47	38.16
VIT_05s0094g00920.t01	Wine grape	nucleus	41.53	37.96
CDX83457	Canola	golgi, plasma membrane, vacuole	36.94	37.25
OQU88036	Sorghum	extracellular, plasma membrane	40.82	36.91
Solyc06g082910.2.1	Tomato	extracellular	40.59	36.86
KRH71295	Soybean	vacuole	37.88	36.59
CDY44259	Canola	plasma membrane, vacuole	36.24	36.54
Solyc09g042740.2.1	Tomato	endoplasmic reticulum, vacuole	38.94	36.41
PGSC0003DMT400071147	Potato	endoplasmic reticulum, golgi	40.24	36.23
EER97466	Sorghum	plasma membrane	33.76	36.15
KXG38231	Sorghum	plastid	38.35	36.14
KRH50174	Soybean	vacuole	38.0	36.05
AT2G43800.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	37.65	35.79
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	36.94	35.08
KXG39923	Sorghum	mitochondrion	38.82	35.07
KRH06515	Soybean	endoplasmic reticulum, plastid, vacuole	42.35	33.36
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	40.82	32.77
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.18	32.53
AT3G25500.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	40.12	32.45
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.29	32.17
KRH00989	Soybean	extracellular, golgi, vacuole	38.94	31.86
KRH40232	Soybean	endoplasmic reticulum, extracellular	38.71	31.73
CDX74041	Canola	golgi, plasma membrane, plastid	25.53	30.43
CDY35941	Canola	plastid	26.71	30.31
CDY07990	Canola	golgi, plasma membrane, plastid	25.29	29.78
CDX85333	Canola	plasma membrane	28.47	29.4
CDY28040	Canola	plastid	26.47	29.22
AT5G48360.1	Thale cress	extracellular, vacuole	26.71	29.03
CDX86310	Canola	endoplasmic reticulum, plasma membrane	27.41	28.87
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.18	28.62
EES12298	Sorghum	plasma membrane	27.88	27.82
AT3G07540.1	Thale cress	plasma membrane	27.29	27.59
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	25.88	26.86
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	26.12	24.48
EES04559	Sorghum	plasma membrane	24.24	24.12
EES13879	Sorghum	golgi	25.65	24.01
EES05554	Sorghum	plasma membrane	25.06	23.15
KXG39193	Sorghum	plastid	23.18	23.12
EES10325	Sorghum	golgi	25.41	22.41
KXG25260	Sorghum	cytosol	17.53	12.31
KXG31267	Sorghum	cytosol	17.18	9.79
OQU80260	Sorghum	cytosol	13.06	9.79
OQU90190	Sorghum	cytosol	17.18	8.89
KXG23793	Sorghum	cytosol	17.18	7.24
EER87977	Sorghum	cytosol	3.76	5.96

Protein Annotations

Gene3D:1.20.58.2220	MapMan:20.2.2.6.1	EntrezGene:8054851	UniProt:C5X5G1	EnsemblPlants:EER97050	ProteinID:EER97050
ProteinID:EER97050.1	InterPro:FH2_Formin	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015425
PFAM:PF02181	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF261	SMART:SM00498	EnsemblPlantsGene:SORBI_3002G265200
SUPFAM:SSF101447	unigene:Sbi.18905	TMHMM:TMhelix	UniParc:UPI0001A83905	RefSeq:XP_002460529.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:65036186..65039900

Molecular Weight (calculated)

90437.3 Da

IEP (calculated)

9.417

GRAVY (calculated)

-0.207

Length

850 amino acids

Sequence
(BLAST)

001: MPRLSPPFPA VAAVTAVTCP VQSLQRSQAR SLLLSFPSHL AKLAHFCVRT ILSNLVESWG LGTSLPFPGS AAAAMLAQVL LVHLLLLLLL AATSSADHHR
101: RHYWGRRALH EPLFPLESTP ALPPPPPPAP FFPFLPGAAA PPTVTPDVGS ASTPADTAGP GDASSSSSSS PHPTAPANIS SLAALPVSSH TTPLRSFLSS
201: HRLLTVLVLV VAVAAAVLSA ALVYILARRQ RRHSPKEEPA VYTKPSSLAP ANPVLYDGGD QHGRGSTATV SSTSSPELRP MPPLPRQFQQ TRMNFPSCSK
301: SVPDTGTGGK RGSEGAPPPR PPPPPPPPPP MPPVKDKGGA TAAASAPPAP PPPLPRAGNG SGWLPRRHSE RQATTVIRAS ASAVHPEESP GRAPSEKQTD
401: SDADAAALPK LKPLHWDKVR ASSGRPTVWD QLKASSFRVN EEMIETLFVS NSTWRSSKSG TKGPNSSLCS QENKVLDPKK SQNIAIMLRA LNATKEEVCK
501: ALLDGQAESL GTELLEMLLK MAPSREEEIK LKEYREDAVS KLGPAESFLK AVLAIPFAFK RVEAMLYITN FDLEVDYLKT SYKTLEAACE ELQGSRLFHK
601: ILDAVLKTGN RMNTGTNRGN AHAFKLDALL KLVDVKGADG KTTLLHFVIE EIIKSEGANI LATGQTSDQA SALADELQCK KVGLKIVASL GGELNSVKKA
701: AAMDSDALAS CVSKLSSGVS KISEVLHLNQ QLLGSDDSCK RFRASIGEFL QKAEAEIAGV QAQEGRALAL VRETTEFFHG DSAKEEGHPL RIFMVVRDFL
801: TALDHVCKDV VKMNERAAAG GSSRRVGNMH VPAVFNSVRS TSSSEESSSP

Best Arabidopsis Sequence Match ( AT3G25500.1 )
(BLAST)

0001: MLFFLFFFYL LLSSSSDLVF ADRRVLHEPF FPIDSPPPSP PSPPPLPKLP FSSTTPPSSS DPNASPFFPL YPSSPPPPSP ASFASFPANI SSLIVPHATK
0101: SPPNSKKLLI VAISAVSSAA LVALLIALLY WRRSKRNQDL NFSDDSKTYT TDSSRRVYPP PPATAPPTRR NAEARSKQRT TTSSTNNNSS EFLYLGTMVN
0201: QRGIDEQSLS NNGSSSRKLE SPDLQPLPPL MKRSFRLNPD VGSIGEEDEE DEFYSPRGSQ SGREPLNRVG LPGQNPRSVN NDTISCSSSS SGSPGRSTFI
0301: SISPSMSPKR SEPKPPVIST PEPAELTDYR FVRSPSLSLA SLSSGLKNSD EVGLNQIFRS PTVTSLTTSP ENNKKENSPL SSTSTSPERR PNDTPEAYLR
0401: SPSHSSASTS PYRCFQKSPE VLPAFMSNLR QGLQSQLLSS PSNSHGGQGF LKQLDALRSR SPSSSSSSVC SSPEKASHKS PVTSPKLSSR NSQSLSSSPD
0501: RDFSHSLDVS PRISNISPQI LQSRVPPPPP PPPPLPLWGR RSQVTTKADT ISRPPSLTPP SHPFVIPSEN LPVTSSPMET PETVCASEAA EETPKPKLKA
0601: LHWDKVRASS DREMVWDHLR SSSFKLDEEM IETLFVAKSL NNKPNQSQTT PRCVLPSPNQ ENRVLDPKKA QNIAILLRAL NVTIEEVCEA LLEGNADTLG
0701: TELLESLLKM APTKEEERKL KAYNDDSPVK LGHAEKFLKA MLDIPFAFKR VDAMLYVANF ESEVEYLKKS FETLEAACEE LRNSRMFLKL LEAVLKTGNR
0801: MNVGTNRGDA HAFKLDTLLK LVDVKGADGK TTLLHFVVQE IIRAEGTRLS GNNTQTDDIK CRKLGLQVVS SLCSELSNVK KAAAMDSEVL SSYVSKLSQG
0901: IAKINEAIQV QSTITEESNS QRFSESMKTF LKRAEEEIIR VQAQESVALS LVKEITEYFH GNSAKEEAHP FRIFLVVRDF LGVVDRVCKE VGMINERTMV
1001: SSAHKFPVPV NPMMPQPLPG LVGRRQSSSS SSSSSTSSSD EDEHNSISLV S

Arabidopsis Description

FH1Formin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VBY1]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.