CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018371_P001	Maize	cytosol	86.39	91.09
Os02t0794900-00	Rice	cytosol	65.46	70.78
TraesCS6D01G339300.1	Wheat	cytosol	61.23	68.39
TraesCS6B01G389300.1	Wheat	cytosol	60.83	67.89
HORVU6Hr1G085030.6	Barley	plasma membrane	63.92	67.16
PGSC0003DMT400029052	Potato	cytosol	12.07	65.22
PGSC0003DMT400020452	Potato	cytosol	6.84	61.82
GSMUA_Achr1P25980_001	Banana	plasma membrane	9.99	52.65
VIT_11s0016g00160.t01	Wine grape	cytosol	37.76	48.79
KRH72294	Soybean	cytosol	37.56	46.32
KRH03063	Soybean	cytosol	36.69	45.28
CDY02799	Canola	cytosol	37.96	45.24
Bra002668.1-P	Field mustard	cytosol	39.17	45.2
CDY62689	Canola	cytosol	39.17	45.2
AT5G58160.1	Thale cress	cytosol	38.3	45.1
CDY32721	Canola	cytosol	37.49	44.94
KXG25260	Sorghum	cytosol	35.41	43.64
OQU80260	Sorghum	cytosol	31.72	41.71
CDY43877	Canola	cytosol	36.82	41.65
Solyc12g010110.1.1	Tomato	cytosol	36.22	41.57
Bra020385.1-P	Field mustard	cytosol	38.03	40.62
EER87977	Sorghum	cytosol	14.55	40.41
Solyc07g005480.2.1	Tomato	vacuole	23.21	39.14
KRH15654	Soybean	cytosol, peroxisome	15.29	37.56
OQU90190	Sorghum	cytosol	36.49	33.13
KXG23793	Sorghum	cytosol	34.21	25.3
EER97466	Sorghum	plasma membrane	9.99	18.77
EER97050	Sorghum	endoplasmic reticulum, plasma membrane, plastid	9.79	17.18
KXG39923	Sorghum	mitochondrion	10.6	16.79
EES12298	Sorghum	plasma membrane	9.46	16.55
EER99497	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	10.06	16.54
KXG38231	Sorghum	plastid	9.86	16.3
OQU88036	Sorghum	extracellular, plasma membrane	10.26	16.28
KXG39193	Sorghum	plastid	9.19	16.08
EES10325	Sorghum	golgi	10.4	16.08
EES04559	Sorghum	plasma membrane	8.85	15.46
EES05554	Sorghum	plasma membrane	9.52	15.43
EES13879	Sorghum	golgi	8.45	13.88
EES17525	Sorghum	endoplasmic reticulum, plasma membrane	7.04	12.82

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	UniProt:A0A194YSV3	ncoils:Coil
InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021	InterPro:IPR029023	EnsemblPlants:KXG31267
ProteinID:KXG31267	ProteinID:KXG31267.1	ProteinID:OQU85878.1	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181
PFscan:PS51182	PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498
SMART:SM01326	EnsemblPlantsGene:SORBI_3004G329400	SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom
InterPro:Tensin_phosphatase	UniParc:UPI0007F27AD6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:66334732..66345164

Molecular Weight (calculated)

164667.0 Da

IEP (calculated)

7.708

GRAVY (calculated)

-0.475

Length

1491 amino acids

Sequence
(BLAST)

0001: MSLFRKFFYK KPPDGLLLIT DNIYVFDHCF SMKEVDGDHF EAHIRGIAAD LLENFHDYSF MIANFGTKEE ESPIYHILSE YGMTVLDYPG HYEGCPLLTM
0101: EMIHCILKSS ESWLSLGQHN LLLMHCERGS WPVLAFMLAA LLIYLGHYSD EQKTLDMVYK QSSLELLEMF SPLNSMPSQM RYLRYISTRN VMPEWPPADR
0201: ALTLDCVILR MVPNFHGQGG FRPIFRIYGP DPLMPPDQTP KVLFSTPTKS NLVRFYSQAD ELVKIDLHCH VQGDVVLECI NLYEDLDREE MVCRIMFNTA
0301: FIRSNILMLN RDHVDMLWNA KDQFPKDFRF EVIFSDMDAV TSHVTTEPVI HQEKQGLGVE EFAKVLDIFN HLDWFDGKKD TITHTAQLKI SAITDEPETF
0401: FDTHEELESE SFPGEINSSS VVLKIGNELG MLVSSKPRHI PQDSSSADVQ SKSQTTVPSR SRTRPTTALL SPSKVKISKT SASPMELSSS TIMPQQSSSP
0501: VQPRRAMSDS AVQVEISELA STERSCSQTP IEHEPSPLME NRPASTASLL PLCTPPPLPP PPPTVSLLPV PAKLPKNTST STINISLRAT VHSSPPSEPS
0601: VPPKDILRTE ELVKSQEPSY ETHGKLQTDS ATGPNDLLLS PAASSSLDEE LSNTRASPFT DLPAVPQNPD TRPFAIQATR SETIPPPPPP PPPPPPKSGM
0701: MLFPLTHGEE VKITIEKVVP HQPPHPPPPP PSAPFSSSNP YDVSVISAPP KRARSPPLPP LPPALAKSPF SSPRPRSPPL PSTLLNEPEV SLSQPQFLDN
0801: KHSATMEYPD TPSLMPTFSH SVARVQTPPV PPPPPPRSLP VPPPPSRTPP VPPPPPPPSR TPPVPPPPPS RTPPVPPPPP PSSRTPPVPP PPPPPRTPPV
0901: PPPPPHSSQT PPAPPPPPPP PPSQSFPSLS KRNRVAAPHP PPPPPLSSRV TSAPSVPPSP PLPPPKLAVA NNASQKSPTI QPPPPPPGPR HKLSSHSLPT
1001: KGSGANSNPP PPPAFSFGAK DRSTARSKSP RSLRANQASK RTPLKPLHWV KVSRAIQGSL WAETQKSDEV SRTPEIDISE LESLFSVTMP NMEAKRQRQQ
1101: PSVATKQEKV HLIDLQRSKN CEIMLRNIKM PLPDLMGSVL ALDDSVVDGD QVDYLIKFCP TKEEMELLKG YTGKKENLGN CEQFFLEMMK VPRVESKLRI
1201: LSFKIKFVTQ VADLKSNLNT INSVAEEVKS SLKLKRVMQT ILSLGNALNQ GTARGAAVGF RLDSLLKLSD IRARNNRMTL MHYLCKILSD KLPEVLDFSR
1301: DLANLEPASK IQLKELAEEM QAITKGLEKV EQELATSEKD PPETEIFYRK LKLFLADAQA EGRSLAFLYS TAGKSADSLA HYFGEDPVRC PFEQVVSTLL
1401: SFTKTFERAH DENVKQLELE KKRAQAEAEK EKPKLTAHKK GESLELGISK EKAKLIAHKK GESLELGIIK EKAKLTAHKR GESLEFGISG R

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.