Factsheet for Bra002668.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62689	Canola	cytosol	100.0	100.0
AT5G58160.1	Thale cress	cytosol	80.42	82.07
Bra020385.1-P	Field mustard	cytosol	81.97	75.86
PGSC0003DMT400029052	Potato	cytosol	16.02	75.0
PGSC0003DMT400020452	Potato	cytosol	8.82	69.09
Bra020386.1-P	Field mustard	cytosol	23.76	67.32
GSMUA_Achr1P25980_001	Banana	plasma membrane	12.93	59.01
Bra038438.1-P	Field mustard	extracellular	13.16	56.11
VIT_11s0016g00160.t01	Wine grape	cytosol	49.61	55.55
KRH72294	Soybean	cytosol	50.46	53.93
KRH03063	Soybean	cytosol	49.23	52.65
Bra007822.1-P	Field mustard	cytosol	45.2	52.24
Solyc12g010110.1.1	Tomato	cytosol	45.82	45.57
Bra023204.1-P	Field mustard	cytosol	40.25	44.71
TraesCS1A01G075600.1	Wheat	cytosol	47.37	44.09
TraesCS1D01G077900.1	Wheat	cytosol	47.76	44.04
TraesCS1B01G094200.1	Wheat	cytosol	47.37	43.62
Solyc07g005480.2.1	Tomato	vacuole	29.41	42.99
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	40.63	42.44
OQU80260	Sorghum	cytosol	36.76	41.89
TraesCS6B01G389300.1	Wheat	cytosol	42.11	40.72
Os08t0280200-02	Rice	nucleus	28.02	40.54
TraesCS6D01G339300.1	Wheat	cytosol	41.72	40.37
Os02t0794900-00	Rice	cytosol	42.72	40.03
KXG31267	Sorghum	cytosol	45.2	39.17
Zm00001d032101_P001	Maize	cytosol	20.51	38.91
Bra005952.1-P	Field mustard	nucleus	43.42	37.91
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.96	34.91
Bra009307.1-P	Field mustard	cytosol	19.35	30.98
HORVU5Hr1G123610.1	Barley	cytosol, plastid	0.93	30.0
Bra029655.1-P	Field mustard	cytosol	5.73	24.42
Bra001256.1-P	Field mustard	plastid	6.19	21.0
Bra012246.1-P	Field mustard	cytosol	3.02	19.9
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	12.07	19.12
Bra002969.1-P	Field mustard	plasma membrane	12.85	18.93
Bra029012.1-P	Field mustard	plasma membrane	12.31	18.51
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	12.85	18.51
Bra039561.1-P	Field mustard	golgi	11.84	18.28
Bra024640.1-P	Field mustard	vacuole	10.37	18.01
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	11.15	17.58
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	11.15	17.5
Bra035415.1-P	Field mustard	cytosol, plasma membrane, plastid	6.58	17.35
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	10.45	16.83
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	11.07	16.69
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	13.7	16.22
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	10.91	15.75
Bra031838.1-P	Field mustard	cytosol	5.03	14.77
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	8.9	14.25
Bra017889.1-P	Field mustard	nucleus	8.13	13.29

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlantsGene:Bra002668	EnsemblPlants:Bra002668.1
EnsemblPlants:Bra002668.1-P	ncoils:Coil	InterPro:FH2_Formin	InterPro:IPR014020	InterPro:IPR015425	InterPro:IPR029021
InterPro:IPR029023	UniProt:M4CEN7	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF190	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI000254533E
SEG:seg	:	:	:	:	:

Description

AT5G58160 (E=4e-297) | actin binding

Coordinates

chrA10:+:8324945..8330743

Molecular Weight (calculated)

142047.0 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.430

Length

1292 amino acids

Sequence
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF SSDSWEEENY KVYMAGVVNQ LQEHFPDASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPSN LLLMHCERGA WPVLAFMLAA LLIYRKQYSG ELKTLDMIYK QAPRELLQLF SPLNPMPSQC RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FVPDVSGQGG FRPIFRVYGQ DPLFVDDKKP KLLYSTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDLVRE VMLFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKDQFPKGFR VELLFSDMDA ASSVDVMDFS CLEEKDGLPI EVFSKVQELF NQVDWADQTD ATRNMLQHLA IANAVHERPE
0401: GGNSSPRLQG LSPRSIHDLV KQAAMDSNAK IKLSSVSEVE TVDSPEKQPT GTAKKFIAED THSVLQISSQ DATKLSGQES PSLKLVHHSA TVKPFVDGSE
0501: FSEKAEENNG KLVSFASSTP SLPHPTIASL PPVAAPPPPS PPPVPTVASQ PSEKLQHSVV QPAETVSQGN SWVSLAGSTF NQTTPNEKHP VTLPPTSLAS
0601: DVSPQESSRI TKSSSVLPSA TLSADPTKPP IGAPNDVASP LGQPARLPPP VSKSDKTHEL PQRPPPPPPP PPPPPPPMQY SDQNTVAAVS PPIPSPAPAI
0701: TASPVSNSDK THGLPRPPPP PPPPPMQHSD ENTVARVSPP VPPPPPAIAA SPPPPPPPAP PIPQSHGNSA MKSSPPAPPR PPAPPAPPNA PPPPGQMKAP
0801: SAPPPPPLGQ MRSPSAPPPP PKLGTKPSPS SGTGVPPTPA LPGGSLSSGK GRMLRVNSKN TAKKLKPYHW LKLTRAVNGS LWAETQMSSE ASKAPEIDMT
0901: ELESLFSSAP EEAGKSRLNS SRGPKPEKVQ LIEHRRAYNC EIMLSKVKVP LQDLMHSVLN LEESALDADQ VENLIKFCPT REEMELLKGY TGDVDKLGKC
1001: ELFFLEMMKV PRVETKLRVF SFKIQFRSQI SELKNSLSVV NSAAEQIKNS EKFKRIMQTV LSLGNALNQG TARGAAVGFK LDSLPKLSET RARNNRMTLM
1101: HYLCKILAEK MPEVLDFTKD LSSLEPSTKI QLKFLAEEMQ AINKGLEKVV QELSLSENDG PISHNFNKIL KEFLLYAEAE VRSLASLYSG VGRNVDGLIL
1201: YFGEDPAKCP FEQVVSTLLN FVRLFNRAHE ENGKQLEAEA KKKAEEEKSK TSEVDKESRK PLSLEEQVKK EKTKISGFDK ETKEPLDEGT PA

Best Arabidopsis Sequence Match ( AT5G58160.1 )
(BLAST)

0001: MALFRKLFYR KPPDGLLEIC DRVFVFDCCF STDSWEEENY KVYMAGVVNQ LQEHFPEASS LVFNFREVGT RSVMADVLSE HGLTIMDYPR HYEGCSLLPV
0101: EVMHHFLRSS ESWLSLGPNN LLLMHCESGA WPVLAFMLAA LLIYRKQYSG ESKTLDMIYK QAPRELLRLF SPLNPIPSQL RYLQYVSRRN LVSEWPPLDR
0201: ALTMDCVILR FIPDVSGQGG FRPMFRIYGQ DPFFVDDKKP KLLYTTPKKG KHLRVYKQAE CELVKIDINC HVQGDIVIEC LSLNDDMERE VMMFRVVFNT
0301: AFIRSNILML NRDEVDTLWH IKEFPKGFRV ELLFSDMDAA SSVDLMNFSS LEEKDGLPIE VFSKVHEFFN QVDWVDQTDA TRNMFQQLAI ANAVQEGLDG
0401: NSSPRLQGLS PKSIHDIMKH AAIENSAKFK LSSMSEVETI DTPEKPPTDS VKKFIAEDVH SVLQINNQEQ NASEDATKLL HQESPSLKLV HHSATVKPLV
0501: DDSKSPENAE ENFPKSPSAH DGKAISFSPP TPSPPHPVRP QLAQAGAPPP PPPLPAAASK PSEQLQHSVV QATEPLSQGN SWMSLAGSTF QTVPNEKNLI
0601: TLPPTPPLAS TSHASPEPSS KTTNSLLLSP QASPATPTNP SKTVSVDFFG AATSPHLGAS DNVASNLGQP ARSPPPISNS DKKPALPRPP PPPPPPPMQH
0701: STVTKVPPPP PPAPPAPPTP IVHTSSPPPP PPPPPPPAPP TPQSNGISAM KSSPPAPPAP PRLPTHSASP PPPTAPPPPP LGQTRAPSAP PPPPPKLGTK
0801: LSPSGPNVPP TPALPTGPLS SGKGRMLRVN LKNSPAKKLK PYHWLKLTRA VNGSLWAETQ MSSEASKAPD IDMTELESLF SASAPEQAGK SRLDSSRGPK
0901: PEKVQLIEHR RAYNCEIMLS KVKVPLQDLT NSVLNLEESA LDADQVENLI KFCPTREEME LLKGYTGDKD KLGKCELFFL EMMKVPRVET KLRVFSFKMQ
1001: FTSQISELRN SLGVVNSAAE QVKNSEKFKR IMQTILSLGN ALNQGTARGA AVGFKLDSLP KLSETRARNN RMTLMHYLCK ILAEKIPEVL DFTKELSSLE
1101: PATKIQLKFL AEEMQAINKG LEKVVQELSL SENDGPISHN FNKILKEFLH YAEAEVRSLA SLYSGVGRNV DGLILYFGED PAKCPFEQVV STLLNFVRLF
1201: NRAHEENGKQ LEAEAKKNAA EKEKPKTGGL DTEIKKPLNE EVKEEKTKTS GLGKEMSDRL KERTAP

Arabidopsis Description

FH13Formin-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.