Factsheet for Bra035415.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33614	Canola	mitochondrion, nucleus	97.76	62.21
Bra017889.1-P	Field mustard	nucleus	91.84	56.96
GSMUA_Achr6P04430_001	Banana	cytosol	44.29	51.06
AT1G59910.1	Thale cress	nucleus	88.78	46.82
Bra024640.1-P	Field mustard	vacuole	58.78	38.71
Bra016233.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	57.14	34.91
VIT_01s0026g00950.t01	Wine grape	endoplasmic reticulum	55.51	33.33
GSMUA_Achr8P22610_001	Banana	plasma membrane	51.22	33.11
Bra029655.1-P	Field mustard	cytosol	20.41	33.0
Solyc05g006430.1.1	Tomato	endoplasmic reticulum	52.24	32.61
PGSC0003DMT400058304	Potato	plasma membrane	52.24	32.0
VIT_14s0108g00290.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	53.47	31.99
Bra012246.1-P	Field mustard	cytosol	12.45	31.12
KRH45763	Soybean	endoplasmic reticulum, vacuole	47.14	29.24
KRH69441	Soybean	golgi, plasma membrane	47.14	28.73
KRG99223	Soybean	golgi, vacuole	45.31	28.68
Bra001256.1-P	Field mustard	plastid	22.24	28.61
KRH74702	Soybean	endoplasmic reticulum	47.35	28.57
KXG39193	Sorghum	plastid	45.71	26.29
Zm00001d017983_P001	Maize	plasma membrane	48.78	25.95
TraesCS6B01G342200.1	Wheat	endoplasmic reticulum, plasma membrane	47.14	25.64
TraesCS6D01G291400.1	Wheat	endoplasmic reticulum, plasma membrane	47.14	25.64
TraesCS6A01G312000.2	Wheat	plastid	47.14	25.47
EES05554	Sorghum	plasma membrane	47.76	25.43
HORVU6Hr1G076870.4	Barley	plastid	47.35	24.76
Bra037087.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	36.12	21.69
Bra039561.1-P	Field mustard	golgi	35.71	20.91
Bra029012.1-P	Field mustard	plasma membrane	36.53	20.84
Bra002969.1-P	Field mustard	plasma membrane	36.12	20.18
Bra038438.1-P	Field mustard	extracellular	12.24	19.8
Bra039436.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	32.04	19.17
Bra004786.1-P	Field mustard	mitochondrion, plasma membrane, plastid	32.86	18.79
Bra024447.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.29	18.73
Bra001148.1-P	Field mustard	extracellular, golgi, plasma membrane	31.43	18.71
Bra031838.1-P	Field mustard	cytosol	16.33	18.18
Bra000328.1-P	Field mustard	golgi, plasma membrane, vacuole	33.06	18.1
Bra013217.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	33.67	15.12
Bra037491.1-P	Field mustard	endoplasmic reticulum, plasma membrane	23.06	14.0
Bra023204.1-P	Field mustard	cytosol	19.18	8.08
Bra009306.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	18.98	7.52
Bra007822.1-P	Field mustard	cytosol	16.73	7.33
Bra002668.1-P	Field mustard	cytosol	17.35	6.58
Bra005952.1-P	Field mustard	nucleus	19.18	6.35
Bra020385.1-P	Field mustard	cytosol	17.96	6.3
Bra028684.1-P	Field mustard	cytosol, nucleus, plasma membrane	18.78	5.65
Bra009307.1-P	Field mustard	cytosol	4.9	2.97
Bra020386.1-P	Field mustard	cytosol	0.41	0.44

Protein Annotations

EnsemblPlants:Bra035415.1	EnsemblPlants:Bra035415.1-P	EnsemblPlantsGene:Bra035415	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF239	PFAM:PF02181	PFscan:PS51444	SEG:seg
SMART:SM00498	SUPFAM:SSF101447	UniParc:UPI0002544AAC	UniProt:M4F2W5	MapMan:20.2.2.6.1	:

Description

AT1G59910 (E=1e-212) | formin homology 2 domain-containing protein / FH2 domain-containing protein

Coordinates

chrA01:-:16477720..16479274

Molecular Weight (calculated)

53407.6 Da

IEP (calculated)

7.628

GRAVY (calculated)

-0.386

Length

490 amino acids

Sequence
(BLAST)

001: MSKTGPPKPP GNGKGPTKAA ESSSALTKDD PAQPKLKPLH WDKVNPDASH SMVWHRIDGG SFNFDGDLME ALFGYVGARK PGEANTVPQK PTVSTTQTYI
101: LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDADTDTLEK LSGIAPTPEE QTEIIEFSGD PTKLADAESL LFHILRAVPS AFNRFNVMLF KINYGSEVSQ
201: QKGSLQTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDGKTTLLHF VVEEVVRSEG KRAAMSKISG GDIADASREE
301: QEIEFIKLGL PIIGGLSSEF TNVKKAAGID YDSFLATTLA LGTRLKETKR LLDQSKGKED GCLTKLRSFF ESAEEELRVI TEEQLRIMDL VKKTTNYYQA
401: GGALKERNLF QLFVIIRDFL GMVDTACSEI ARIQRKQRPA ATVAGASSST AATTPSAAAP QRNAVRFPIL PPNFMSEHSR YSSSDSDSDS

Best Arabidopsis Sequence Match ( AT1G59910.1 )
(BLAST)

001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES

Arabidopsis Description

FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.