Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035415.1-P | Field mustard | cytosol, plasma membrane, plastid | 62.21 | 97.76 |
| CDY70125 | Canola | cytosol | 59.61 | 95.62 |
| CDY24501 | Canola | mitochondrion, nucleus | 93.12 | 88.63 |
| CDY55061 | Canola | mitochondrion, nucleus | 83.25 | 86.16 |
| CDY31597 | Canola | mitochondrion | 70.65 | 85.53 |
| AT1G59910.1 | Thale cress | nucleus | 80.65 | 66.85 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 28.05 | 50.82 |
| CDY16239 | Canola | vacuole | 40.52 | 44.44 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 44.94 | 43.69 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 43.38 | 43.04 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 32.21 | 39.49 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 41.82 | 39.46 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 40.26 | 37.85 |
| CDX94358 | Canola | mitochondrion, plastid | 7.66 | 37.82 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 38.05 | 37.32 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 35.97 | 36.54 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 37.79 | 36.38 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 36.49 | 35.57 |
| KRG99223 | Soybean | golgi, vacuole | 35.06 | 34.88 |
| KRH69441 | Soybean | golgi, plasma membrane | 35.58 | 34.08 |
| KRH74702 | Soybean | endoplasmic reticulum | 35.84 | 33.99 |
| EES05554 | Sorghum | plasma membrane | 37.01 | 30.98 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.97 | 30.74 |
| TraesCS6A01G312000.2 | Wheat | plastid | 36.1 | 30.65 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 35.84 | 30.63 |
| Zm00001d017983_P001 | Maize | plasma membrane | 36.36 | 30.4 |
| KXG39193 | Sorghum | plastid | 33.12 | 29.93 |
| HORVU6Hr1G076870.4 | Barley | plastid | 36.1 | 29.67 |
| CDY37849 | Canola | endoplasmic reticulum | 18.96 | 27.81 |
| CDY22934 | Canola | nucleus, plastid | 24.03 | 25.38 |
| CDY08720 | Canola | mitochondrion | 23.51 | 24.9 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 24.42 | 23.53 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 24.29 | 23.46 |
| CDY43811 | Canola | golgi | 25.97 | 23.45 |
| CDY43029 | Canola | plasma membrane | 25.97 | 23.18 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 21.82 | 22.55 |
| CDY42470 | Canola | plasma membrane | 25.06 | 22.47 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 24.55 | 22.42 |
| CDY44259 | Canola | plasma membrane, vacuole | 24.42 | 22.3 |
| CDY18346 | Canola | plasma membrane | 24.81 | 21.9 |
| CDY53556 | Canola | nucleus | 24.03 | 21.89 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 22.6 | 21.86 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 23.64 | 21.67 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 22.34 | 21.66 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 24.94 | 21.29 |
| CDY17909 | Canola | golgi, vacuole | 23.25 | 21.11 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 21.04 | 20.17 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.17 | 19.95 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 16.88 | 18.23 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 16.75 | 17.87 |
| CDY27130 | Canola | cytosol, mitochondrion | 8.96 | 17.56 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 24.03 | 17.47 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 24.16 | 17.29 |
| CDY35941 | Canola | plastid | 16.75 | 17.22 |
| CDY28040 | Canola | plastid | 17.01 | 17.01 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 17.14 | 16.36 |
| CDX85333 | Canola | plasma membrane | 17.4 | 16.28 |
| CDY12361 | Canola | cytosol | 15.06 | 10.34 |
| CDY49153 | Canola | cytosol | 13.77 | 10.11 |
| CDX99025 | Canola | cytosol | 14.68 | 9.69 |
| CDX76779 | Canola | cytosol | 13.77 | 9.49 |
| CDY12294 | Canola | cytosol | 14.81 | 9.35 |
| CDY34742 | Canola | cytosol | 13.38 | 9.17 |
| CDY40774 | Canola | cytosol | 11.04 | 9.13 |
| CDY14029 | Canola | cytosol | 14.29 | 8.94 |
| CDX69994 | Canola | plastid | 13.51 | 8.76 |
| CDY32721 | Canola | cytosol | 14.03 | 8.68 |
| CDY02799 | Canola | cytosol | 13.64 | 8.39 |
| CDY62689 | Canola | cytosol | 13.77 | 8.2 |
| CDX69993 | Canola | cytosol | 12.73 | 8.08 |
| CDX81069 | Canola | nucleus | 14.94 | 7.92 |
| CDX78309 | Canola | nucleus | 15.19 | 7.82 |
| CDX99026 | Canola | cytosol | 12.73 | 7.71 |
| CDY43877 | Canola | cytosol | 12.47 | 7.28 |
| CDX99029 | Canola | cytosol | 0.13 | 6.25 |
| CDX69992 | Canola | cytosol | 3.77 | 3.83 |
| CDX99027 | Canola | nucleus | 2.47 | 2.2 |
| CDY02798 | Canola | cytosol | 1.04 | 1.63 |
Protein Annotations
| EnsemblPlants:CDY33614 | EnsemblPlantsGene:GSBRNA2T00054933001 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDY33614 | ProteinID:CDY33614.1 |
| SEG:seg | SMART:SM00498 | SUPFAM:SSF101447 | UniParc:UPI0004EDBFE4 | UniProt:A0A078H811 | MapMan:20.2.2.6.1 |
Description
BnaC01g28450DFormin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078H811]
Coordinates
chrLK032318:-:215995..218402
Molecular Weight (calculated)
82990.8 Da
IEP (calculated)
8.507
GRAVY (calculated)
-0.559
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLFRKNGS SSRRRIKDKL RGRNSDRGKR GEEEERDRYD SLPAPPSPWG FLFPEDFERI DGNLKAVIED EEGLDVIYWK KLLELENSGK TPKPRRGGKS
101: DGDGDGEEEE GFYRGSGTNP KGDAFSFHVK KSQSPLSSGG EVGDQSNNTS VDGGRYSYTS SSTGGFSDYG KQSQSKFQAP GGRRYPSLPL PPGQLGVVTA
201: SSSTMPPPLT VNHGSFSSSP SIQTGGGGGS GLSPAIPLPP GQFPAAIGFS SISPLPLTVN QTVPPPPPGK KAPGPPPPPP VSKTGPPKPP GNGKGPTKAA
301: EGSSAISKDD PAQPKLKPLH WDKVNPDASH SMVWHRIDGG SFNFDGDLME ALFGYVGARK PSEANSVPQK PTVSTTQTYI LDPRKSQNKA IVLKSLGMTK
401: EEIIDLLTQG HDADTDTLEK LSGIAPTPEE QTEIIEFSGD PTKLADAESL LFHILRAVPS AFNRFNVMLF KINYGSEVSQ QKGSLQTLES ACNELRARGL
501: FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDGKTTLLHF VVEEVVRSEG KRAAMSKISG CDIADASREE QEIEFIKLGL PIIGGLSSEF
601: TNVKKAAGID YDSFLATTLA LGTRLKETKR LLDQSKGKED GCLTKLRSFF ESAEEELRVI TEEQLRIMDL VKKTTNYYQA GGALKERNLF QLFVIIRDFL
701: GMVDTACSEI ARNQRKQRPA ATVAGASPST AATTPSAAAP QRNAVTFPIL PPNFMSEHSR YSSSDSDSDS
101: DGDGDGEEEE GFYRGSGTNP KGDAFSFHVK KSQSPLSSGG EVGDQSNNTS VDGGRYSYTS SSTGGFSDYG KQSQSKFQAP GGRRYPSLPL PPGQLGVVTA
201: SSSTMPPPLT VNHGSFSSSP SIQTGGGGGS GLSPAIPLPP GQFPAAIGFS SISPLPLTVN QTVPPPPPGK KAPGPPPPPP VSKTGPPKPP GNGKGPTKAA
301: EGSSAISKDD PAQPKLKPLH WDKVNPDASH SMVWHRIDGG SFNFDGDLME ALFGYVGARK PSEANSVPQK PTVSTTQTYI LDPRKSQNKA IVLKSLGMTK
401: EEIIDLLTQG HDADTDTLEK LSGIAPTPEE QTEIIEFSGD PTKLADAESL LFHILRAVPS AFNRFNVMLF KINYGSEVSQ QKGSLQTLES ACNELRARGL
501: FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDGKTTLLHF VVEEVVRSEG KRAAMSKISG CDIADASREE QEIEFIKLGL PIIGGLSSEF
601: TNVKKAAGID YDSFLATTLA LGTRLKETKR LLDQSKGKED GCLTKLRSFF ESAEEELRVI TEEQLRIMDL VKKTTNYYQA GGALKERNLF QLFVIIRDFL
701: GMVDTACSEI ARNQRKQRPA ATVAGASPST AATTPSAAAP QRNAVTFPIL PPNFMSEHSR YSSSDSDSDS
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.