Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31597 | Canola | mitochondrion | 86.88 | 65.57 |
| CDY55061 | Canola | mitochondrion, nucleus | 97.92 | 63.17 |
| CDY33614 | Canola | mitochondrion, nucleus | 95.62 | 59.61 |
| CDY24501 | Canola | mitochondrion, nucleus | 96.25 | 57.11 |
| GSMUA_Achr6P04430_001 | Banana | cytosol | 45.42 | 51.29 |
| AT1G59910.1 | Thale cress | nucleus | 89.79 | 46.39 |
| CDX94358 | Canola | mitochondrion, plastid | 12.29 | 37.82 |
| CDY11614 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.71 | 35.7 |
| CDY16239 | Canola | vacuole | 52.08 | 35.61 |
| CDY14670 | Canola | endoplasmic reticulum, golgi, vacuole | 58.75 | 35.61 |
| VIT_01s0026g00950.t01 | Wine grape | endoplasmic reticulum | 56.67 | 33.33 |
| GSMUA_Achr8P22610_001 | Banana | plasma membrane | 52.29 | 33.11 |
| Solyc05g006430.1.1 | Tomato | endoplasmic reticulum | 53.33 | 32.61 |
| VIT_14s0108g00290.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 54.79 | 32.11 |
| PGSC0003DMT400058304 | Potato | plasma membrane | 53.12 | 31.88 |
| CDY38795 | Canola | endoplasmic reticulum, golgi, plasma membrane | 39.79 | 30.41 |
| KRH45763 | Soybean | endoplasmic reticulum, vacuole | 48.12 | 29.24 |
| KRG99223 | Soybean | golgi, vacuole | 46.46 | 28.81 |
| KRH69441 | Soybean | golgi, plasma membrane | 48.12 | 28.73 |
| KRH74702 | Soybean | endoplasmic reticulum | 48.12 | 28.45 |
| KXG39193 | Sorghum | plastid | 46.88 | 26.41 |
| CDY37849 | Canola | endoplasmic reticulum | 28.75 | 26.29 |
| Zm00001d017983_P001 | Maize | plasma membrane | 49.79 | 25.95 |
| TraesCS6D01G291400.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.12 | 25.64 |
| TraesCS6B01G342200.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.12 | 25.64 |
| EES05554 | Sorghum | plasma membrane | 48.96 | 25.54 |
| TraesCS6A01G312000.2 | Wheat | plastid | 48.12 | 25.47 |
| HORVU6Hr1G076870.4 | Barley | plastid | 48.33 | 24.76 |
| CDY22934 | Canola | nucleus, plastid | 34.79 | 22.91 |
| CDY08720 | Canola | mitochondrion | 34.58 | 22.83 |
| CDY06511 | Canola | endoplasmic reticulum, golgi, plasma membrane | 35.0 | 21.03 |
| CDY08280 | Canola | endoplasmic reticulum, golgi, plasma membrane | 34.79 | 20.95 |
| CDY43811 | Canola | golgi | 37.08 | 20.87 |
| CDY43029 | Canola | plasma membrane | 37.08 | 20.63 |
| CDY05170 | Canola | extracellular, golgi, plasma membrane | 31.88 | 20.54 |
| CDY42470 | Canola | plasma membrane | 36.46 | 20.37 |
| CDX79799 | Canola | mitochondrion, plastid, vacuole | 33.33 | 20.15 |
| CDY18346 | Canola | plasma membrane | 36.25 | 19.95 |
| CDY53556 | Canola | nucleus | 35.0 | 19.88 |
| CDY43578 | Canola | endoplasmic reticulum, extracellular | 34.79 | 19.88 |
| CDY27766 | Canola | golgi, plasma membrane, vacuole | 32.29 | 19.47 |
| CDX74146 | Canola | extracellular, golgi, plasma membrane | 31.67 | 18.93 |
| CDY17909 | Canola | golgi, vacuole | 33.33 | 18.87 |
| CDX83457 | Canola | golgi, plasma membrane, vacuole | 33.12 | 18.86 |
| CDY44259 | Canola | plasma membrane, vacuole | 32.92 | 18.74 |
| CDY40709 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 31.88 | 18.73 |
| CDY36494 | Canola | endoplasmic reticulum, vacuole | 34.38 | 18.29 |
| CDY27130 | Canola | cytosol, mitochondrion | 14.38 | 17.56 |
| CDY15092 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 33.54 | 15.2 |
| CDX74041 | Canola | golgi, plasma membrane, plastid | 22.29 | 15.01 |
| CDY52291 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 33.54 | 14.96 |
| CDY07990 | Canola | golgi, plasma membrane, plastid | 21.88 | 14.54 |
| CDY35941 | Canola | plastid | 22.29 | 14.29 |
| CDY28040 | Canola | plastid | 22.71 | 14.16 |
| CDX86310 | Canola | endoplasmic reticulum, plasma membrane | 23.75 | 14.13 |
| CDX85333 | Canola | plasma membrane | 23.96 | 13.97 |
| CDY49153 | Canola | cytosol | 19.17 | 8.78 |
| CDY40774 | Canola | cytosol | 16.25 | 8.38 |
| CDY12361 | Canola | cytosol | 18.96 | 8.11 |
| CDX99025 | Canola | cytosol | 18.75 | 7.72 |
| CDX69994 | Canola | plastid | 18.96 | 7.67 |
| CDY12294 | Canola | cytosol | 18.75 | 7.38 |
| CDY14029 | Canola | cytosol | 18.54 | 7.23 |
| CDX69993 | Canola | cytosol | 18.12 | 7.17 |
| CDX76779 | Canola | cytosol | 16.67 | 7.16 |
| CDY34742 | Canola | cytosol | 16.04 | 6.86 |
| CDY32721 | Canola | cytosol | 17.5 | 6.75 |
| CDX99026 | Canola | cytosol | 17.71 | 6.69 |
| CDY02799 | Canola | cytosol | 17.29 | 6.63 |
| CDY62689 | Canola | cytosol | 17.29 | 6.42 |
| CDY43877 | Canola | cytosol | 17.29 | 6.3 |
| CDX81069 | Canola | nucleus | 18.96 | 6.27 |
| CDX78309 | Canola | nucleus | 19.17 | 6.15 |
| CDX69992 | Canola | cytosol | 2.71 | 1.72 |
| CDX99027 | Canola | nucleus | 0.83 | 0.46 |
| CDY02798 | Canola | cytosol | 0.42 | 0.41 |
| CDX99029 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70125 | EnsemblPlantsGene:GSBRNA2T00096562001 | Gene3D:1.20.58.2220 | InterPro:FH2_Formin | InterPro:IPR015425 | ncoils:Coil |
| PANTHER:PTHR23213 | PANTHER:PTHR23213:SF239 | PFAM:PF02181 | PFscan:PS51444 | ProteinID:CDY70125 | ProteinID:CDY70125.1 |
| SEG:seg | SMART:SM00498 | SUPFAM:SSF101447 | UniParc:UPI0004EEE3CE | UniProt:A0A078JUJ3 | MapMan:20.2.2.6.1 |
Description
BnaCnng66830DFormin-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUJ3]
Coordinates
chrLK041241:-:1843..3522
Molecular Weight (calculated)
52587.4 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.394
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: KGPTKAAESS SAISKTEDPA QPKLKPLHWD KVNPDASHSM VWHRIDGGSF NFDGDLMEAL FGYVGARKPS EANTVPQKPT VSTTQTYILD PRKSQNKAIV
101: LKSLGMTKEE IIDLLTEGHD ADSDTLEKLS GIAPTPEEQT EIIDFSGDPT KLADAESLLF HILRAVPSAF NRFNVMLFKI NYGSEVAQQK GSLQTLESAC
201: NELRARGLFM KLLEAILKAG NRMNAGTARG NAQAFNLTAL RKLSDVKSVD GKTTLLHFVV EEVVRSEGKR AAMNKISNEN TGGDIADASR EEQEIEFIKL
301: GLPIIGGLSS EFTNVKKAAG IDYDSFVATT LALGTRLKET KRLLEQSKGK EDGCLTKLRS FFESAEEELR VITEEQLRIM DLVKKTTNYY QAGALKERNL
401: FQLFVIIRDF LGMVDNACSE IARSQRKQRP AATVAGASTS TAATPTAAAP QRNAVRFPIL PPNFMSEHSR YSSSDSDSDS
101: LKSLGMTKEE IIDLLTEGHD ADSDTLEKLS GIAPTPEEQT EIIDFSGDPT KLADAESLLF HILRAVPSAF NRFNVMLFKI NYGSEVAQQK GSLQTLESAC
201: NELRARGLFM KLLEAILKAG NRMNAGTARG NAQAFNLTAL RKLSDVKSVD GKTTLLHFVV EEVVRSEGKR AAMNKISNEN TGGDIADASR EEQEIEFIKL
301: GLPIIGGLSS EFTNVKKAAG IDYDSFVATT LALGTRLKET KRLLEQSKGK EDGCLTKLRS FFESAEEELR VITEEQLRIM DLVKKTTNYY QAGALKERNL
401: FQLFVIIRDF LGMVDNACSE IARSQRKQRP AATVAGASTS TAATPTAAAP QRNAVRFPIL PPNFMSEHSR YSSSDSDSDS
001: MSFLFRKNGS SSRRKIKEKL RGRHSDRGGK REEDERYGGS GSDLPPPPSP WGFLFPEDFV RIDGNLKAVI VDDEGLDVIY WKKLLELENS GKIRKNPKPR
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
101: RRGDKSGDGF RRTGADQDDN DDGDDEVGDE SIEEAFSFHV KKSQSASSSG GEIRDQSNNG GGGGGGGGGG GRYYTSSSAS PSRPSSSSAS AASPSRTSYA
201: TSAGSDYGGG GGGKQSQSKF QAPGGGSFPS SPSQIHSGGG RSPPLPLPPG QFTAGNASFP SSTQPPPGQY MAGNASFPSS TPPPPGQYMA GNAPFSSSTP
301: LPPGQYPAVN AQLSTSAPSV PLPPGQYTAV NAPFSTSTQP VSLPPGQYMP GNAALSASTP LTPGQFTTAN APPAPPGPAN QTSPPPPPPP SAAAPPPPPP
401: PKKGPAAPPP PPPPGKKGAG PPPPPPMSKK GPPKPPGNPK GPTKSGETSL AVGKTEDPTQ PKLKPLHWDK MNPDASRSMV WHKIDGGSFN FDGDLMEALF
501: GYVARKPSES NSVPQNQTVS NSVPHNQTYI LDPRKSQNKA IVLKSLGMTK EEIIDLLTEG HDAESDTLEK LAGIAPTPEE QTEIIDFDGE PMTLAYADSL
601: LFHILKAVPS AFNRFNVMLF KINYGSEVAQ QKGSLLTLES ACNELRARGL FMKLLEAILK AGNRMNAGTA RGNAQAFNLT ALRKLSDVKS VDAKTTLLHF
701: VVEEVVRSEG KRAAMNKNMM SSDNGSGENA DMSREEQEIE FIKMGLPIIG GLSSEFTNVK KAAGIDYDSF VATTLALGTR VKETKRLLDQ SKGKEDGCLT
801: KLRSFFESAE EELKVITEEQ LRIMELVKKT TNYYQAGALK ERNLFQLFVI IRDFLGMVDN ACSEIARNQR KQQQQRPATT VAGASSSPAE TPSVAAAPQR
901: NAVRFPILPP NFMSESSRYS SSSDSDSES
Arabidopsis Description
FH7Formin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.