CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34742	Canola	cytosol	96.96	96.44
Bra007822.1-P	Field mustard	cytosol	95.34	95.26
AT3G32400.2	Thale cress	cytosol	35.9	81.01
AT2G25050.1	Thale cress	cytosol	83.44	79.79
GSMUA_Achr1P25960_001	Banana	mitochondrion	12.62	67.14
CDX99029	Canola	cytosol	0.72	50.0
GSMUA_Achr3P04690_001	Banana	cytosol	50.67	49.69
CDY40774	Canola	cytosol	40.29	48.34
CDY27130	Canola	cytosol, mitochondrion	16.65	47.33
CDY02798	Canola	cytosol	20.41	46.53
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	28.47	46.49
CDY02799	Canola	cytosol	50.67	45.24
CDY32721	Canola	cytosol	50.31	45.18
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	59.27	44.97
CDY62689	Canola	cytosol	51.57	44.58
KRH05363	Soybean	cytosol	57.74	44.06
CDY49153	Canola	cytosol	41.09	43.8
CDY12361	Canola	cytosol	42.7	42.51
CDY14029	Canola	cytosol	46.82	42.49
CDY43877	Canola	cytosol	49.69	42.11
CDX99025	Canola	cytosol	43.42	41.6
CDX69994	Canola	plastid	43.69	41.11
CDY12294	Canola	cytosol	43.69	40.03
GSMUA_Achr1P25970_001	Banana	cytosol	26.59	39.81
CDX81069	Canola	nucleus	47.09	36.23
CDX69992	Canola	cytosol	24.26	35.8
CDX78309	Canola	nucleus	47.27	35.27
CDX69993	Canola	cytosol	36.53	33.64
CDX99026	Canola	cytosol	37.33	32.81
CDX99027	Canola	nucleus	16.38	21.21
CDY05170	Canola	extracellular, golgi, plasma membrane	12.71	19.06
CDY22934	Canola	nucleus, plastid	12.09	18.52
CDY38795	Canola	endoplasmic reticulum, golgi, plasma membrane	10.38	18.47
CDY27766	Canola	golgi, plasma membrane, vacuole	13.07	18.34
CDY37849	Canola	endoplasmic reticulum	8.59	18.29
CDY08720	Canola	mitochondrion	11.64	17.88
CDY43578	Canola	endoplasmic reticulum, extracellular	13.25	17.62
CDY08280	Canola	endoplasmic reticulum, golgi, plasma membrane	12.44	17.44
CDY18346	Canola	plasma membrane	13.61	17.43
CDY36494	Canola	endoplasmic reticulum, vacuole	14.06	17.41
CDX79799	Canola	mitochondrion, plastid, vacuole	12.35	17.38
CDX74146	Canola	extracellular, golgi, plasma membrane	12.44	17.31
CDY43029	Canola	plasma membrane	13.34	17.27
CDY43811	Canola	golgi	13.16	17.23
CDY42470	Canola	plasma membrane	13.25	17.23
CDY40709	Canola	endoplasmic reticulum, plasma membrane, vacuole	12.53	17.14
CDY06511	Canola	endoplasmic reticulum, golgi, plasma membrane	12.18	17.02
CDY11614	Canola	endoplasmic reticulum, plasma membrane, vacuole	11.82	17.01
CDY44259	Canola	plasma membrane, vacuole	12.8	16.96
CDY17909	Canola	golgi, vacuole	12.71	16.75
CDX83457	Canola	golgi, plasma membrane, vacuole	12.62	16.73
CDX94358	Canola	mitochondrion, plastid	2.33	16.67
CDY70125	Canola	cytosol	7.16	16.67
CDY53556	Canola	nucleus	12.35	16.33
CDY35941	Canola	plastid	10.74	16.02
CDY14670	Canola	endoplasmic reticulum, golgi, vacuole	11.28	15.91
CDY15092	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	14.86	15.68
CDY16239	Canola	vacuole	9.85	15.67
CDY28040	Canola	plastid	10.74	15.58
CDX74041	Canola	golgi, plasma membrane, plastid	9.94	15.57
CDY52291	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	14.95	15.52
CDY55061	Canola	mitochondrion, nucleus	10.03	15.05
CDY07990	Canola	golgi, plasma membrane, plastid	9.67	14.96
CDY24501	Canola	mitochondrion, nucleus	10.12	13.97
CDY33614	Canola	mitochondrion, nucleus	9.49	13.77
CDX85333	Canola	plasma membrane	9.85	13.37
CDY31597	Canola	mitochondrion	7.61	13.36
CDX86310	Canola	endoplasmic reticulum, plasma membrane	9.58	13.26

Protein Annotations

Gene3D:1.20.58.2220	Gene3D:2.60.40.1110	MapMan:20.2.2.6.2	Gene3D:3.90.190.10	EnsemblPlants:CDX76779	ProteinID:CDX76779
ProteinID:CDX76779.1	ncoils:Coil	InterPro:FH2_Formin	EnsemblPlantsGene:GSBRNA2T00127275001	InterPro:IPR014020	InterPro:IPR015425
InterPro:IPR029021	InterPro:IPR029023	PFAM:PF02181	PFAM:PF10409	PFscan:PS51181	PFscan:PS51182
PFscan:PS51444	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	InterPro:Prot-tyrosine_phosphatase-like	SMART:SM00498	SMART:SM01326
SUPFAM:SSF101447	SUPFAM:SSF49562	SUPFAM:SSF52799	InterPro:Tensin_C2-dom	InterPro:Tensin_phosphatase	UniParc:UPI0004EE18A1
SEG:seg	:	:	:	:	:

Description

BnaC08g33650D

Coordinates

chrLK031808:+:1028292..1033685

Molecular Weight (calculated)

124009.0 Da

IEP (calculated)

8.145

GRAVY (calculated)

-0.388

Length

1117 amino acids

Sequence
(BLAST)

0001: MALFRKFFYK KPPEGLVEIS ERVYVFDCCL TTDMLEEEEY RVYVGRIMSQ LREQFPGASF MVFNFRDGES TSLMESVLSE HDMTTIMDYP SHYEGCPLLT
0101: METVHHFLKS SENWLLLSQQ NILLAHCERG GWPVLAFMLA SLLLYRKQFS GEEKTLEMMY KYAPRELLQL MSPLNPLPSQ LRFLRYVSSR SVGSQWPPLD
0201: RAVTLDCINL KLVPDFDGEG GCRPIFRIYG QDPFMASDRT SKVLFSMPKR SKAVKHYKQA DCEVVKIDIN CHILGDVVLE CITLDSDHER EEMMFRVVFN
0301: TAFLRSNALL LNRDDVDVLW NTTDRFPKGF RAEVIFSEMG AGNNHVYVDL PDMEENDGLP MEAFAKVQEI FSDGEWLDPN SDVAVTVFNQ ITAANILQES
0401: LDSGSPRSPD SRSLIESALE KVREKTKLMI SENVAVSPDA FSPVWKERDT DSCHRSYADP NSLIKKVDEP HGLRVSVQRQ AHSKIISPRL TSPVLNRCPT
0501: QASSPASVSR FHSSPSSLGI TSILHDHGPG KGEEATSSSS PSITFQPALH PLILKASPSN GSPPGETVVK PPTLPLLKPL KILSPPPPPP PPPRRPASSS
0601: LRSTATQGPP PPPPPPPQRS AQPSFPSPPP PPPPKKVATT SNAPPPPPPP LRSKPLSGAA AAPPVPPPPA PSALSRSQNG GCNGNVPPVP GPPLGLKGRG
0701: MLQTNLKGQG QTRKANLKPY HWLKLTRALQ GSLWAEAQQT PDEAATAPEF DISELEKLFS AAIPTSDNET KGGKSGRRGR PKVQKVQLIE LRRAYNCEIM
0801: LSKVKIPLPD LMSSVLALDE SVIDVDQVDN LIKFCPTKEE AELLKGYTGN KENLGRCEQF FLELLKVPRV ETKLRVFSYK IQFHSQVTDL RRGLNTIHHA
0901: ANEARSAKLK RIMQTILSLG NALNHGTARG SAIGFRLDSL LKLTDTRSRN TFSIVLAEKL PELLDFPKDL VSLEAATKIQ LKYLAEEMQA IRKGLEKVVQ
1001: EFTTSETDGP VSKHFRMNLK EFLSLAEGEV RSLASLYSTV GGSADALALY FGEDPARVPF EQVVSTLQNF VRIFVRSHEE NCKQVEFEKR RVQKETENDK
1101: LKKGAPGNQK LHVPAPS

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.