Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G32400.2 | Thale cress | cytosol | 40.5 | 95.56 |
| AT3G32420.1 | Thale cress | cytosol | 8.73 | 95.33 |
| Bra007822.1-P | Field mustard | cytosol | 80.31 | 83.9 |
| CDY34742 | Canola | cytosol | 80.39 | 83.62 |
| CDX76779 | Canola | cytosol | 79.79 | 83.44 |
| GSMUA_Achr1P25960_001 | Banana | mitochondrion | 13.18 | 73.33 |
| AT5G07780.1 | Thale cress | plastid | 21.23 | 53.45 |
| GSMUA_Achr3P04690_001 | Banana | cytosol | 50.17 | 51.45 |
| GSMUA_Achr3P13430_001 | Banana | plasma membrane, plastid | 28.0 | 47.81 |
| AT5G58160.1 | Thale cress | cytosol | 50.77 | 46.84 |
| AT1G42980.1 | Thale cress | cytosol | 11.9 | 46.49 |
| VIT_04s0008g06530.t01 | Wine grape | cytosol, nucleus, plasma membrane | 57.71 | 45.79 |
| KRH05363 | Soybean | cytosol | 56.76 | 45.29 |
| AT1G31810.1 | Thale cress | cytosol | 44.01 | 41.79 |
| GSMUA_Achr1P25970_001 | Banana | cytosol | 25.68 | 40.21 |
| AT5G07770.3 | Thale cress | plastid | 22.09 | 35.39 |
| AT5G07740.2 | Thale cress | nucleus | 47.95 | 33.27 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 22.09 | 29.76 |
| AT5G07650.1 | Thale cress | cytosol | 20.63 | 29.57 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 8.82 | 19.43 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 14.55 | 18.91 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 7.36 | 18.45 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 11.82 | 18.16 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 13.61 | 17.67 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 12.93 | 16.89 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 11.13 | 16.62 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 12.5 | 16.52 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 14.55 | 16.18 |
| AT3G25493.1 | Thale cress | vacuole | 2.14 | 15.62 |
| AT3G07540.1 | Thale cress | plasma membrane | 10.96 | 15.22 |
| AT1G59910.1 | Thale cress | nucleus | 10.96 | 13.78 |
Protein Annotations
| Gene3D:1.20.58.2220 | Gene3D:2.60.40.1110 | MapMan:20.2.2.6.2 | Gene3D:3.90.190.10 | ArrayExpress:AT2G25050 | EnsemblPlantsGene:AT2G25050 |
| RefSeq:AT2G25050 | TAIR:AT2G25050 | RefSeq:AT2G25050-TAIR-G | EnsemblPlants:AT2G25050.1 | TAIR:AT2G25050.1 | Unigene:At.22744 |
| ncoils:Coil | InterPro:FH2_Formin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR014020 | InterPro:IPR015425 | InterPro:IPR029021 | InterPro:IPR029023 | PFAM:PF02181 | PFAM:PF10409 |
| PO:PO:0000293 | PFscan:PS51181 | PFscan:PS51182 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 |
| InterPro:Prot-tyrosine_phosphatase-like | SMART:SM00498 | SMART:SM01326 | SUPFAM:SSF101447 | SUPFAM:SSF49562 | SUPFAM:SSF52799 |
| InterPro:Tensin_C2-dom | InterPro:Tensin_phosphatase | UniParc:UPI0008496BF7 | SEG:seg | : | : |
Description
Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
Coordinates
chr2:-:10653683..10660558
Molecular Weight (calculated)
129986.0 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.352
Length
1168 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.