Factsheet for GSMUA_Achr1P25960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P13600_001	Banana	extracellular	67.62	47.81
GSMUA_Achr7P26410_001	Banana	endoplasmic reticulum, golgi	70.95	30.66
AT3G32400.2	Thale cress	cytosol	70.48	29.9
GSMUA_Achr3P13430_001	Banana	plasma membrane, plastid	85.71	26.32
GSMUA_Achr3P04690_001	Banana	cytosol	77.14	14.22
Bra007822.1-P	Field mustard	cytosol	72.38	13.6
GSMUA_Achr3P30260_001	Banana	mitochondrion, plasma membrane	69.52	13.49
AT2G25050.1	Thale cress	cytosol	73.33	13.18
CDY34742	Canola	cytosol	68.1	12.73
CDX76779	Canola	cytosol	67.14	12.62
GSMUA_Achr6P16780_001	Banana	cytosol	65.71	11.76
VIT_04s0008g06530.t01	Wine grape	cytosol, nucleus, plasma membrane	80.0	11.41
KRH05363	Soybean	cytosol	78.57	11.27
GSMUA_Achr6P04430_001	Banana	cytosol	20.48	10.12
GSMUA_Achr4P07090_001	Banana	cytosol	21.9	10.0
GSMUA_Achr7P26240_001	Banana	cytosol	15.71	9.97
GSMUA_Achr8P07370_001	Banana	endoplasmic reticulum, golgi	22.86	9.66
GSMUA_Achr6P18370_001	Banana	nucleus	24.29	9.06
GSMUA_Achr7P18740_001	Banana	nucleus	21.9	9.02
GSMUA_Achr4P32680_001	Banana	cytosol, mitochondrion	71.43	8.59
GSMUA_Achr3P23040_001	Banana	cytosol, mitochondrion, plastid	24.29	7.86
GSMUA_Achr11P...	Banana	mitochondrion, plastid	15.71	7.67
GSMUA_Achr5P25760_001	Banana	mitochondrion	15.71	7.52
GSMUA_Achr10P...	Banana	plastid	21.9	5.73
GSMUA_Achr8P22610_001	Banana	plasma membrane	20.0	5.54
GSMUA_Achr9P02450_001	Banana	plasma membrane, plastid	20.48	5.13
GSMUA_Achr2P11400_001	Banana	endoplasmic reticulum, extracellular	17.62	5.12
GSMUA_Achr7P26420_001	Banana	cytosol, mitochondrion	18.1	4.08
GSMUA_Achr2P14090_001	Banana	mitochondrion	12.86	4.06
GSMUA_Achr7P23740_001	Banana	plastid	22.86	4.0
GSMUA_Achr1P25980_001	Banana	plasma membrane	1.9	1.41
GSMUA_Achr3P13420_001	Banana	cytosol	2.38	0.81
GSMUA_Achr1P25970_001	Banana	cytosol	1.9	0.54
GSMUA_Achr5P13590_001	Banana	cytosol	0.48	0.11

Protein Annotations

EnsemblPlants:GSMUA_Achr1P25960_001	EnsemblPlants:GSMUA_Achr1T25960_001	EnsemblPlantsGene:GSMUA_Achr1G25960_001	Gene3D:1.20.58.2220	InterPro:FH2_Formin	InterPro:IPR015425
ncoils:Coil	PANTHER:PTHR23213	PANTHER:PTHR23213:SF271	PFAM:PF02181	PFscan:PS51444	SEG:seg
SUPFAM:SSF101447	UniParc:UPI0002964A60	UniProt:M0S353	MapMan:20.2.2.6.2	:	:

Description

Formin-like protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25960_001]

Coordinates

chr1:-:20558654..20565103

Molecular Weight (calculated)

23442.3 Da

IEP (calculated)

7.947

GRAVY (calculated)

-0.377

Length

210 amino acids

Sequence
(BLAST)

001: MQTILSLGNA LNQGTARGSA VGFRLDSLLK LSDTRARNNK MTLMHYLCKV IADKLPELLD FPKDLVSLDV AAKIQLKTLA EEMQAISKGL EKVEQELTAS
101: ENDGPVSQTF CKTLKEFLVV SEAEVRALTS LYSNVGRNAD ALTLYFGEDP ARCPFEQVVS TLLNFVKMFA RAHEENCKQL ELEKKKARKE AEQEKVKNSH
201: TKKEPQSIPP

Best Arabidopsis Sequence Match ( AT2G25050.1 )
(BLAST)

0001: MALFRKFFHR KPPEGLLEIS ERVYVFDCCL TTDMLEDEDY RVYVSRIMSQ LREQFPGASF MVFNFRDGDS RSRMESVLTE YDMTIMDYPR HYEGCPLLTM
0101: ETVHHFLKSA ESWLLLSQQN ILLSHCELGG WPTLAFMLAS LLLYRKQFSG EHRTLEMIYK QAPRELLQLM SPLNPLPSQL RFLQYISRRN VGSQWPPLDQ
0201: ALTLDCVNLR LIPDFDGEGG CRPIFRIYGQ DPFMASDRTS KVLFSMPKRS KAVRQYKQAD CELVKIDINC HILGDVVLEC ITLGSDLERE EMMFRVVFNT
0301: AFLRSNILTL NRGEIDVLWN TTDRFPKDFS AEVIFSEMGA GKKLASVDLP HMEEKDVLPM EAFAKVQEIF SEAEWLDPNS DVAVTVFNQI TAANILQESL
0401: DSGSPRSPDS RSLLESALEK VKEKTKLMIS ENIVSSPDTS SPEKEKDTMS SHKSYADPNS ILKKVDESRG LRVSVQRNVH SKIFSPRMVQ SPVTSPLPNR
0501: SPTQGSPASI SRFHSSPSSL GITSILHDHG SCKDEESTSS SPASPSISFL PTLHPLTSSQ PKKASPQCPQ SPTPVHSNGP PSAEAAVTSS PLPPLKPLRI
0601: LSRPPPPPPP PPISSLRSTP SPSSTSNSIA TQGPPPPPPP PPLQSHRSAL SSSPLPPPLP PKKLLATTNP PPPPPPPLHS NSRMGAPTSS LVLKSPPVPP
0701: PPAPAPLSRS HNGNIPPVPG PPLGLKGRGI LQNLKGQGQT RKANLKPYHW LKLTRAVQGS LWAEAQKSDE AATAPDFDIS ELEKLFSAVN LSSDSENNGG
0801: KSGRRARPKV EKVQLIELRR AYNCEIMLSK VKIPLPDLMS SVLALDESVI DVDQVDNLIK FCPTKEEAEL LKGFTGNKET LGRCEQFFLE LLKVPRVETK
0901: LRVFSFKIQF HSQVTDLRRG LNTIHSAANE VRGSAKLKRI MQTILSLGNA LNHGTARETL VLFKNLNSLL HFFLYISSLL TGSAIGFRLD SLLKLTDTRS
1001: RNSKMTLMHY LCKVLAEKLP ELLNFPKDLV SLEAATKIQL KYLAEEMQAI SKGLEKVVQE FTASETDGQI SKHFRMNLKE FLSVAEGEVR SLASLYSTVG
1101: GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN

Arabidopsis Description

Actin-binding FH2 (Formin Homology) protein [Source:TAIR;Acc:AT2G25050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.