Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P25960_001 | Banana | mitochondrion | 29.9 | 70.48 |
| AT5G07780.1 | Thale cress | plastid | 44.44 | 47.41 |
| AT1G42980.1 | Thale cress | cytosol | 27.27 | 45.15 |
| GSMUA_Achr3P13430_001 | Banana | plasma membrane, plastid | 60.81 | 44.01 |
| AT2G25050.1 | Thale cress | cytosol | 95.56 | 40.5 |
| CDX76779 | Canola | cytosol | 81.01 | 35.9 |
| Bra007822.1-P | Field mustard | cytosol | 80.61 | 35.69 |
| CDY34742 | Canola | cytosol | 80.81 | 35.62 |
| AT5G07770.3 | Thale cress | plastid | 46.67 | 31.69 |
| AT5G07650.1 | Thale cress | cytosol | 43.84 | 26.63 |
| AT5G07760.2 | Thale cress | cytosol, plastid | 45.25 | 25.84 |
| GSMUA_Achr3P04690_001 | Banana | cytosol | 59.19 | 25.72 |
| AT5G58160.1 | Thale cress | cytosol | 59.6 | 23.3 |
| AT1G31810.1 | Thale cress | cytosol | 56.16 | 22.6 |
| VIT_04s0008g06530.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.25 | 21.94 |
| KRH05363 | Soybean | cytosol | 62.83 | 21.24 |
| GSMUA_Achr1P25970_001 | Banana | cytosol | 31.31 | 20.78 |
| AT5G07740.2 | Thale cress | nucleus | 57.17 | 16.82 |
| AT3G25493.1 | Thale cress | vacuole | 5.05 | 15.62 |
| AT5G67470.1 | Thale cress | extracellular, plasma membrane, vacuole | 24.85 | 13.68 |
| AT1G24150.2 | Thale cress | endoplasmic reticulum | 14.55 | 13.58 |
| AT1G70140.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 20.2 | 13.16 |
| AT5G54650.1 | Thale cress | extracellular, mitochondrion, nucleus, plasma membrane | 22.83 | 12.56 |
| AT2G43800.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 22.02 | 12.19 |
| AT3G05470.1 | Thale cress | extracellular, golgi, plasma membrane | 21.41 | 11.99 |
| AT3G25500.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.24 | 11.42 |
| AT1G59910.1 | Thale cress | nucleus | 20.4 | 10.87 |
| AT5G48360.1 | Thale cress | extracellular, vacuole | 17.17 | 10.87 |
| AT3G07540.1 | Thale cress | plasma membrane | 17.98 | 10.58 |
| AT4G15200.2 | Thale cress | extracellular, golgi, plasma membrane | 9.49 | 10.09 |
| AT3G32420.1 | Thale cress | cytosol | 1.41 | 6.54 |
Protein Annotations
| Gene3D:1.20.58.2220 | MapMan:20.2.2.6.2 | EntrezGene:823026 | ProteinID:AEE77697.1 | ProteinID:ANM64255.1 | ArrayExpress:AT3G32400 |
| EnsemblPlantsGene:AT3G32400 | RefSeq:AT3G32400 | TAIR:AT3G32400 | RefSeq:AT3G32400-TAIR-G | EnsemblPlants:AT3G32400.2 | Unigene:At.53639 |
| ProteinID:BAB01984.1 | ncoils:Coil | InterPro:FH2_Formin | InterPro:IPR015425 | RefSeq:NP_001326296.1 | RefSeq:NP_189774.2 |
| PFAM:PF02181 | PFscan:PS51444 | PANTHER:PTHR23213 | PANTHER:PTHR23213:SF271 | UniProt:Q9LH02 | SMART:SM00498 |
| SUPFAM:SSF101447 | UniParc:UPI00015D7AFC | SEG:seg | : | : | : |
Description
FH17Formin-like protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH02]
Coordinates
chr3:-:13356995..13360630
Molecular Weight (calculated)
54972.3 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.380
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIRELIDIT ELSSIATEGP PPPPPPPLLQ PHHSALSSSP LPPPLPPKKL LATTNTPPPP PPPLHSNSQM GAPTSSLVLK SPHNLKGQGQ TRKANLKPYH
101: WLKLTRAVQG SLWAEAQKSD EAATAPDFDI SEIEKLFSAV NLSSNSENNG GKSGRRARPK VEKVQLIELK RAYNCEIMLS KVKIPLPDLM SSVLALDESV
201: IDVDQVDNLI KFCPTKEEAE LLKGFIGNKE TLGRCEQFFL ELLKVPRVET KLRVFSFKIQ FHSQVTDLRR GLNTIHSATN EVRGSTKLKR IMQTILSLGN
301: ALNHGTARGS AIGFHLDSLL KLTDTRSRNS KMTLMHYLCK VLAEKLPGLL NFPKDMVSLE AATNIQLKYL AEEMQATSKG LEKVVQEFTA SETDCQISKH
401: FHMNLKEFLS VAEGEVRSLA SLYSTVGGSA DALALYFGED PARVPFEQVV STLQNFVRIF VRSHEENCKQ VEFEKKRAQK EAENEKLKKG VYNEN
101: WLKLTRAVQG SLWAEAQKSD EAATAPDFDI SEIEKLFSAV NLSSNSENNG GKSGRRARPK VEKVQLIELK RAYNCEIMLS KVKIPLPDLM SSVLALDESV
201: IDVDQVDNLI KFCPTKEEAE LLKGFIGNKE TLGRCEQFFL ELLKVPRVET KLRVFSFKIQ FHSQVTDLRR GLNTIHSATN EVRGSTKLKR IMQTILSLGN
301: ALNHGTARGS AIGFHLDSLL KLTDTRSRNS KMTLMHYLCK VLAEKLPGLL NFPKDMVSLE AATNIQLKYL AEEMQATSKG LEKVVQEFTA SETDCQISKH
401: FHMNLKEFLS VAEGEVRSLA SLYSTVGGSA DALALYFGED PARVPFEQVV STLQNFVRIF VRSHEENCKQ VEFEKKRAQK EAENEKLKKG VYNEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.